RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 ZNF296Q8WUU4 475 aaPredicted RBP12.68□□□□□ -0.38
PFDN5-201ENST00000243040 C12orf42Q96LP6 360 aa12.68□□□□□ -0.38
PFDN5-201ENST00000243040 PARK7Q99497 189 aaKnown RBP12.68□□□□□ -0.38
PFDN5-201ENST00000243040 ZNF287Q9HBT7 754 aa12.68□□□□□ -0.38
PFDN5-201ENST00000243040 A0A0G2JMZ2 1700 aa12.68□□□□□ -0.38
PFDN5-201ENST00000243040 FKTNO75072 461 aa12.67□□□□□ -0.38
PFDN5-201ENST00000243040 RASA1P20936 1047 aa12.67□□□□□ -0.38
PFDN5-201ENST00000243040 USP14P54578 494 aa12.67□□□□□ -0.38
PFDN5-201ENST00000243040 SEPT2Q15019 361 aa12.67□□□□□ -0.38
PFDN5-201ENST00000243040 TREML2Q5T2D2 321 aa12.67□□□□□ -0.38
PFDN5-201ENST00000243040 CWC27Q6UX04 472 aaKnown RBP12.67□□□□□ -0.38
PFDN5-201ENST00000243040 KIAA1683Q9H0B3 1180 aa12.67□□□□□ -0.38
PFDN5-201ENST00000243040 ANAPC4Q9UJX5 808 aa12.67□□□□□ -0.38
PFDN5-201ENST00000243040 RLFQ13129 1914 aa12.66□□□□□ -0.38
PFDN5-201ENST00000243040 MPHOSPH10O00566 681 aaKnown RBP12.66□□□□□ -0.38
PFDN5-201ENST00000243040 SLC3A2P08195 630 aaKnown RBP12.66□□□□□ -0.38
PFDN5-201ENST00000243040 PDE4BQ07343 736 aa12.66□□□□□ -0.38
PFDN5-201ENST00000243040 PABPC4Q13310 644 aaKnown RBP eCLIP12.66□□□□□ -0.382e-11■■■■□ 23.3
PFDN5-201ENST00000243040 DGKZQ13574 1117 aa12.66□□□□□ -0.38
PFDN5-201ENST00000243040 USP17L2Q6R6M4 530 aa12.66□□□□□ -0.38
PFDN5-201ENST00000243040 DSCC1Q9BVC3 393 aa12.66□□□□□ -0.38
PFDN5-201ENST00000243040 TMOD4Q9NZQ9 345 aa12.66□□□□□ -0.38
PFDN5-201ENST00000243040 PNMA3Q9UL41 463 aa12.66□□□□□ -0.38
PFDN5-201ENST00000243040 FGAP02671 866 aa12.65□□□□□ -0.38
PFDN5-201ENST00000243040 CHMLP26374 656 aa12.65□□□□□ -0.38
PFDN5-201ENST00000243040 HOXA7P31268 230 aaPredicted RBP12.65□□□□□ -0.38
PFDN5-201ENST00000243040 SP3Q02447 781 aa12.65□□□□□ -0.38
PFDN5-201ENST00000243040 ICA1Q05084 483 aa12.65□□□□□ -0.38
PFDN5-201ENST00000243040 BMP2KLQ5H9B9 411 aa12.65□□□□□ -0.38
PFDN5-201ENST00000243040 C17orf99Q6UX52 265 aa12.65□□□□□ -0.38
PFDN5-201ENST00000243040 ACER1Q8TDN7 264 aa12.65□□□□□ -0.38
PFDN5-201ENST00000243040 ERO1AQ96HE7 468 aa12.65□□□□□ -0.38
PFDN5-201ENST00000243040 FEZ1Q99689 392 aa12.65□□□□□ -0.38
PFDN5-201ENST00000243040 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.65□□□□□ -0.38
PFDN5-201ENST00000243040 IL25Q9H293 177 aa12.65□□□□□ -0.38
PFDN5-201ENST00000243040 MKNK2Q9HBH9 465 aa12.65□□□□□ -0.38
PFDN5-201ENST00000243040 EMILIN3Q9NT22 766 aa12.65□□□□□ -0.38
PFDN5-201ENST00000243040 PPP4R2Q9NY27 417 aa12.65□□□□□ -0.38
PFDN5-201ENST00000243040 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.65□□□□□ -0.38
PFDN5-201ENST00000243040 IGKV6D-41A0A0C4DH26 115 aa12.64□□□□□ -0.39
PFDN5-201ENST00000243040 A0A1W2PRG0 241 aa12.64□□□□□ -0.39
PFDN5-201ENST00000243040 FGRP09769 529 aa12.64□□□□□ -0.39
PFDN5-201ENST00000243040 CYP2C8P10632 490 aa12.64□□□□□ -0.39
PFDN5-201ENST00000243040 BCRP11274 1271 aa12.64□□□□□ -0.39
PFDN5-201ENST00000243040 CTU1Q7Z7A3 348 aaKnown RBP12.64□□□□□ -0.39
PFDN5-201ENST00000243040 SIAH1Q8IUQ4 282 aa12.64□□□□□ -0.39
PFDN5-201ENST00000243040 RUFY2Q8WXA3 655 aa12.64□□□□□ -0.39
PFDN5-201ENST00000243040 SH2D4AQ9H788 454 aa12.64□□□□□ -0.39
PFDN5-201ENST00000243040 KANSL2Q9H9L4 492 aa12.64□□□□□ -0.39
PFDN5-201ENST00000243040 ARHGEF10LQ9HCE6 1279 aa12.64□□□□□ -0.39
PFDN5-201ENST00000243040 TMX2Q9Y320 296 aa12.64□□□□□ -0.39
PFDN5-201ENST00000243040 ORC4O43929 436 aa12.63□□□□□ -0.39
PFDN5-201ENST00000243040 PRDM1O75626 825 aa12.63□□□□□ -0.39
PFDN5-201ENST00000243040 PCP11498 1178 aaKnown RBP12.63□□□□□ -0.39
PFDN5-201ENST00000243040 VCAM1P19320 739 aa12.63□□□□□ -0.39
PFDN5-201ENST00000243040 OSBPP22059 807 aa12.63□□□□□ -0.39
PFDN5-201ENST00000243040 SKAP1Q86WV1 359 aa12.63□□□□□ -0.39
PFDN5-201ENST00000243040 CLEC10AQ8IUN9 316 aa12.63□□□□□ -0.39
PFDN5-201ENST00000243040 TNS4Q8IZW8 715 aa12.63□□□□□ -0.39
PFDN5-201ENST00000243040 ZNF444Q8N0Y2 327 aaPredicted RBP12.63□□□□□ -0.39
PFDN5-201ENST00000243040 STK11IPQ8N1F8 1099 aa12.63□□□□□ -0.39
PFDN5-201ENST00000243040 COL11A1P12107 1806 aaPredicted RBP12.62□□□□□ -0.39
PFDN5-201ENST00000243040 SGSM2O43147 1006 aa12.62□□□□□ -0.39
PFDN5-201ENST00000243040 GCLCP48506 637 aaPredicted RBP12.62□□□□□ -0.39
PFDN5-201ENST00000243040 NT5C2P49902 561 aa12.62□□□□□ -0.39
PFDN5-201ENST00000243040 LACTBP83111 547 aaPredicted RBP12.62□□□□□ -0.39
PFDN5-201ENST00000243040 CTDSPL2Q05D32 466 aa12.62□□□□□ -0.39
PFDN5-201ENST00000243040 ZYXQ15942 572 aaKnown RBP12.62□□□□□ -0.39
PFDN5-201ENST00000243040 NEDD1Q8NHV4 660 aa12.62□□□□□ -0.39
PFDN5-201ENST00000243040 CD99L2Q8TCZ2 262 aa12.62□□□□□ -0.39
PFDN5-201ENST00000243040 SMCR8Q8TEV9 937 aaPredicted RBP12.62□□□□□ -0.39
PFDN5-201ENST00000243040 GTF3C2Q8WUA4 911 aaPredicted RBP12.62□□□□□ -0.39
PFDN5-201ENST00000243040 LPAR1Q92633 364 aa12.62□□□□□ -0.39
PFDN5-201ENST00000243040 ASCC2Q9H1I8 757 aaPredicted RBP12.62□□□□□ -0.39
PFDN5-201ENST00000243040 VCPKMTQ9H867 229 aa12.62□□□□□ -0.39
PFDN5-201ENST00000243040 NYAP2Q9P242 653 aa12.62□□□□□ -0.39
PFDN5-201ENST00000243040 CPA4Q9UI42 421 aa12.62□□□□□ -0.39
PFDN5-201ENST00000243040 SYNPO2Q9UMS6 1093 aa12.62□□□□□ -0.39
PFDN5-201ENST00000243040 TACC3Q9Y6A5 838 aa12.62□□□□□ -0.39
PFDN5-201ENST00000243040 HTTP42858 3142 aa12.62□□□□□ -0.39
PFDN5-201ENST00000243040 USP17L15C9J2P7 530 aa12.61□□□□□ -0.39
PFDN5-201ENST00000243040 USP17L13C9JLJ4 530 aa12.61□□□□□ -0.39
PFDN5-201ENST00000243040 USP17L11C9JVI0 530 aa12.61□□□□□ -0.39
PFDN5-201ENST00000243040 USP17L18D6R9N7 530 aa12.61□□□□□ -0.39
PFDN5-201ENST00000243040 USP17L22D6RA61 530 aa12.61□□□□□ -0.39
PFDN5-201ENST00000243040 USP17L17D6RBQ6 530 aa12.61□□□□□ -0.39
PFDN5-201ENST00000243040 USP17L19D6RCP7 530 aa12.61□□□□□ -0.39
PFDN5-201ENST00000243040 USP17L20D6RJB6 530 aa12.61□□□□□ -0.39
PFDN5-201ENST00000243040 TSPY3P0CV98 308 aa12.61□□□□□ -0.39
PFDN5-201ENST00000243040 TSPY8P0CW00 308 aa12.61□□□□□ -0.39
PFDN5-201ENST00000243040 EEF2P13639 858 aaKnown RBP12.61□□□□□ -0.39
PFDN5-201ENST00000243040 IRX3P78415 501 aaPredicted RBP12.61□□□□□ -0.39
PFDN5-201ENST00000243040 CAP1Q01518 475 aa12.61□□□□□ -0.39
PFDN5-201ENST00000243040 USP17L24Q0WX57 530 aa12.61□□□□□ -0.39
PFDN5-201ENST00000243040 PKN2Q16513 984 aaKnown RBP12.61□□□□□ -0.39
PFDN5-201ENST00000243040 FAM110CQ1W6H9 321 aa12.61□□□□□ -0.39
PFDN5-201ENST00000243040 STAG1Q8WVM7 1258 aa12.61□□□□□ -0.39
PFDN5-201ENST00000243040 MCOLN1Q9GZU1 580 aa12.61□□□□□ -0.39
PFDN5-201ENST00000243040 NBPF3Q9H094 633 aa12.61□□□□□ -0.39
PFDN5-201ENST00000243040 PLXNB2O15031 1838 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms