RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 CCZ1BP86790 482 aa18.54■□□□□ 0.56
UBE3D-201ENST00000237186 CCZ1P86791 482 aaPredicted RBP18.54■□□□□ 0.56
UBE3D-201ENST00000237186 EVX2Q03828 476 aa18.54■□□□□ 0.56
UBE3D-201ENST00000237186 HSP90AA2PQ14568 343 aaPredicted RBP18.54■□□□□ 0.56
UBE3D-201ENST00000237186 ARID5BQ14865 1188 aa18.54■□□□□ 0.56
UBE3D-201ENST00000237186 RCSD1Q6JBY9 416 aa18.54■□□□□ 0.56
UBE3D-201ENST00000237186 OLFM4Q6UX06 510 aa18.54■□□□□ 0.56
UBE3D-201ENST00000237186 FILIP1Q7Z7B0 1213 aa18.54■□□□□ 0.56
UBE3D-201ENST00000237186 DGKHQ86XP1 1220 aa18.54■□□□□ 0.56
UBE3D-201ENST00000237186 SRBD1Q8N5C6 995 aaKnown RBP18.54■□□□□ 0.56
UBE3D-201ENST00000237186 CNBD1Q8NA66 436 aa18.54■□□□□ 0.56
UBE3D-201ENST00000237186 BRMS1Q9HCU9 246 aa18.54■□□□□ 0.56
UBE3D-201ENST00000237186 IFNKQ9P0W0 207 aa18.54■□□□□ 0.56
UBE3D-201ENST00000237186 ANKIB1Q9P2G1 1089 aa18.54■□□□□ 0.56
UBE3D-201ENST00000237186 CYP2D6P10635 497 aa18.53■□□□□ 0.56
UBE3D-201ENST00000237186 FANCCQ00597 558 aa18.53■□□□□ 0.56
UBE3D-201ENST00000237186 POSTNQ15063 836 aa18.53■□□□□ 0.56
UBE3D-201ENST00000237186 CRY2Q49AN0 593 aa18.53■□□□□ 0.56
UBE3D-201ENST00000237186 TRIML1Q8N9V2 468 aa18.53■□□□□ 0.56
UBE3D-201ENST00000237186 SPATA20Q8TB22 786 aa18.53■□□□□ 0.56
UBE3D-201ENST00000237186 LRRC4BQ9NT99 713 aa18.53■□□□□ 0.56
UBE3D-201ENST00000237186 MCM9Q9NXL9 1143 aa18.53■□□□□ 0.56
UBE3D-201ENST00000237186 POLR2DO15514 142 aaKnown RBP18.52■□□□□ 0.56
UBE3D-201ENST00000237186 SKILP12757 684 aa18.52■□□□□ 0.56
UBE3D-201ENST00000237186 CCDC178Q5BJE1 867 aa18.52■□□□□ 0.56
UBE3D-201ENST00000237186 SPECC1Q5M775 1068 aa18.52■□□□□ 0.56
UBE3D-201ENST00000237186 CERS3Q8IU89 383 aa18.52■□□□□ 0.56
UBE3D-201ENST00000237186 MAP7D2Q96T17 732 aa18.52■□□□□ 0.56
UBE3D-201ENST00000237186 ROBO3Q96MS0 1386 aa18.52■□□□□ 0.56
UBE3D-201ENST00000237186 MAST2Q6P0Q8 1798 aa18.52■□□□□ 0.55
UBE3D-201ENST00000237186 DLEC1Q9Y238 1755 aa18.52■□□□□ 0.55
UBE3D-201ENST00000237186 NPHP1O15259 732 aa18.52■□□□□ 0.55
UBE3D-201ENST00000237186 ACTN4O43707 911 aaKnown RBP18.52■□□□□ 0.55
UBE3D-201ENST00000237186 BMP6P22004 513 aa18.52■□□□□ 0.55
UBE3D-201ENST00000237186 KIF5BP33176 963 aa18.52■□□□□ 0.55
UBE3D-201ENST00000237186 EARS2Q5JPH6 523 aaKnown RBP18.52■□□□□ 0.55
UBE3D-201ENST00000237186 FAM47AQ5JRC9 791 aa18.52■□□□□ 0.55
UBE3D-201ENST00000237186 ISM2Q6H9L7 571 aa18.52■□□□□ 0.55
UBE3D-201ENST00000237186 PRR5LQ6MZQ0 368 aa18.52■□□□□ 0.55
UBE3D-201ENST00000237186 ZNF804AQ7Z570 1209 aa18.52■□□□□ 0.55
UBE3D-201ENST00000237186 CCDC150Q8NCX0 1101 aa18.52■□□□□ 0.55
UBE3D-201ENST00000237186 FERMT2Q96AC1 680 aa18.52■□□□□ 0.55
UBE3D-201ENST00000237186 CSRNP2Q9H175 543 aa18.52■□□□□ 0.55
UBE3D-201ENST00000237186 PDCL3Q9H2J4 239 aa18.52■□□□□ 0.55
UBE3D-201ENST00000237186 SERTAD1Q9UHV2 236 aa18.52■□□□□ 0.55
UBE3D-201ENST00000237186 TSPY2A6NKD2 308 aa18.51■□□□□ 0.55
UBE3D-201ENST00000237186 NMT2O60551 498 aa18.51■□□□□ 0.55
UBE3D-201ENST00000237186 SMC2O95347 1197 aa18.51■□□□□ 0.55
UBE3D-201ENST00000237186 BAG3O95817 575 aa18.51■□□□□ 0.55
UBE3D-201ENST00000237186 LDHCP07864 332 aa18.51■□□□□ 0.55
UBE3D-201ENST00000237186 TRAPPC10P48553 1259 aa18.51■□□□□ 0.55
UBE3D-201ENST00000237186 ZNF772Q68DY9 489 aaPredicted RBP18.51■□□□□ 0.55
UBE3D-201ENST00000237186 MLKLQ8NB16 471 aa18.51■□□□□ 0.55
UBE3D-201ENST00000237186 TCP11L1Q9NUJ3 509 aa18.51■□□□□ 0.55
UBE3D-201ENST00000237186 BRWD3Q6RI45 1802 aa18.51■□□□□ 0.55
UBE3D-201ENST00000237186 TNRC6CQ9HCJ0 1690 aaKnown RBP18.5■□□□□ 0.55
UBE3D-201ENST00000237186 FOXN1O15353 648 aa18.5■□□□□ 0.55
UBE3D-201ENST00000237186 CBFA2T2O43439 604 aa18.5■□□□□ 0.55
UBE3D-201ENST00000237186 TRIM37O94972 964 aa18.5■□□□□ 0.55
UBE3D-201ENST00000237186 USP17L8P0C7I0 530 aa18.5■□□□□ 0.55
UBE3D-201ENST00000237186 SCG2P13521 617 aa18.5■□□□□ 0.55
UBE3D-201ENST00000237186 LMOD1P29536 600 aaPredicted RBP18.5■□□□□ 0.55
UBE3D-201ENST00000237186 KCNJ6P48051 423 aa18.5■□□□□ 0.55
UBE3D-201ENST00000237186 MORC3Q14149 939 aa18.5■□□□□ 0.55
UBE3D-201ENST00000237186 PFKFB3Q16875 520 aaPredicted RBP18.5■□□□□ 0.55
UBE3D-201ENST00000237186 CT47A1Q5JQC4 288 aaPredicted RBP18.5■□□□□ 0.55
UBE3D-201ENST00000237186 MTERF4Q7Z6M4 381 aaKnown RBP18.5■□□□□ 0.55
UBE3D-201ENST00000237186 MAN1B1Q9UKM7 699 aa18.5■□□□□ 0.55
UBE3D-201ENST00000237186 BAZ2AQ9UIF9 1905 aaKnown RBP18.5■□□□□ 0.55
UBE3D-201ENST00000237186 hCG_1642624A0A1W2PR95 340 aa18.5■□□□□ 0.55
UBE3D-201ENST00000237186 FAM205CA6NFA0 338 aa18.5■□□□□ 0.55
UBE3D-201ENST00000237186 CCDC34Q96HJ3 373 aa18.5■□□□□ 0.55
UBE3D-201ENST00000237186 DACH1Q9UI36 760 aa18.5■□□□□ 0.55
UBE3D-201ENST00000237186 TNNT1P13805 278 aa18.49■□□□□ 0.55
UBE3D-201ENST00000237186 TPD52L1Q16890 204 aaPredicted RBP18.49■□□□□ 0.55
UBE3D-201ENST00000237186 SH3RF1Q7Z6J0 888 aa18.49■□□□□ 0.55
UBE3D-201ENST00000237186 SMARCE1Q969G3 411 aa18.49■□□□□ 0.55
UBE3D-201ENST00000237186 SH3GLB2Q9NR46 395 aa18.49■□□□□ 0.55
UBE3D-201ENST00000237186 IL17RBQ9NRM6 502 aa18.49■□□□□ 0.55
UBE3D-201ENST00000237186 JAG2Q9Y219 1238 aa18.49■□□□□ 0.55
UBE3D-201ENST00000237186 PAXBP1Q9Y5B6 917 aa18.49■□□□□ 0.55
UBE3D-201ENST00000237186 MYH2Q9UKX2 1941 aa18.49■□□□□ 0.55
UBE3D-201ENST00000237186 KIAA1551Q9HCM1 1747 aa18.49■□□□□ 0.55
UBE3D-201ENST00000237186 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.48■□□□□ 0.55
UBE3D-201ENST00000237186 ATP1A3P13637 1013 aa18.48■□□□□ 0.55
UBE3D-201ENST00000237186 ATP2B1P20020 1258 aa18.48■□□□□ 0.55
UBE3D-201ENST00000237186 ATP2B4P23634 1241 aa18.48■□□□□ 0.55
UBE3D-201ENST00000237186 USP5P45974 858 aa18.48■□□□□ 0.55
UBE3D-201ENST00000237186 ATP2C1P98194 919 aaPredicted RBP18.48■□□□□ 0.55
UBE3D-201ENST00000237186 TFAP4Q01664 338 aa18.48■□□□□ 0.55
UBE3D-201ENST00000237186 SLC27A3Q5K4L6 730 aa18.48■□□□□ 0.55
UBE3D-201ENST00000237186 USP49Q70CQ1 688 aa18.48■□□□□ 0.55
UBE3D-201ENST00000237186 RIOK3O14730 519 aaKnown RBP18.48■□□□□ 0.55
UBE3D-201ENST00000237186 GYS1P13807 737 aa18.48■□□□□ 0.55
UBE3D-201ENST00000237186 IL1R1P14778 569 aa18.48■□□□□ 0.55
UBE3D-201ENST00000237186 NYAP1Q6ZVC0 841 aa18.48■□□□□ 0.55
UBE3D-201ENST00000237186 TMC6Q7Z403 805 aa18.48■□□□□ 0.55
UBE3D-201ENST00000237186 ENOX1Q8TC92 643 aaKnown RBP18.48■□□□□ 0.55
UBE3D-201ENST00000237186 SH3RF3Q8TEJ3 882 aaPredicted RBP18.48■□□□□ 0.55
UBE3D-201ENST00000237186 KAT14Q9H8E8 782 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms