RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 EXOSC9Q06265 439 aaKnown RBP2.8□□□□□ -1.96
PRKD3-201ENST00000234179 GRB14Q14449 540 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 CCDC158Q5M9N0 1113 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 SLC4A10Q6U841 1118 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 DHX30Q7L2E3 1194 aaKnown RBP eCLIP2.8□□□□□ -1.96
PRKD3-201ENST00000234179 RPUSD2Q8IZ73 545 aaKnown RBP2.8□□□□□ -1.96
PRKD3-201ENST00000234179 MAGEB6Q8N7X4 407 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 TSPYL6Q8N831 410 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 TRIB2Q92519 343 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 CNPY2Q9Y2B0 182 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 ZNF236Q9UL36 1845 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 LOC285556D6RIA3 1793 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 ZNF521Q96K83 1311 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 C19orf67A6NJJ6 358 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 CLTBP09497 229 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 ACTN1P12814 892 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 CST5P28325 142 aaPredicted RBP2.8□□□□□ -1.96
PRKD3-201ENST00000234179 HMGCS2P54868 508 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 DPP9Q86TI2 863 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 RNPC3Q96LT9 517 aaKnown RBP2.8□□□□□ -1.96
PRKD3-201ENST00000234179 MPHOSPH6Q99547 160 aaKnown RBP2.8□□□□□ -1.96
PRKD3-201ENST00000234179 CDX2Q99626 313 aaPredicted RBP2.8□□□□□ -1.96
PRKD3-201ENST00000234179 ARHGEF10LQ9HCE6 1279 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 LMCD1Q9NZU5 365 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 CXXC1Q9P0U4 656 aaPredicted RBP2.8□□□□□ -1.96
PRKD3-201ENST00000234179 A0A1B0GUL6 1792 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 MYCP01106 439 aaPredicted RBP2.8□□□□□ -1.96
PRKD3-201ENST00000234179 AKR1A1P14550 325 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 RAG1P15918 1043 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 FOXK2Q01167 660 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 CACNB2Q08289 660 aaPredicted RBP2.8□□□□□ -1.96
PRKD3-201ENST00000234179 G3BP1Q13283 466 aaKnown RBP eCLIP2.8□□□□□ -1.96
PRKD3-201ENST00000234179 TTF1Q15361 905 aaPredicted RBP2.8□□□□□ -1.96
PRKD3-201ENST00000234179 NAA16Q6N069 864 aaPredicted RBP2.8□□□□□ -1.96
PRKD3-201ENST00000234179 ZNF467Q7Z7K2 595 aaPredicted RBP2.8□□□□□ -1.96
PRKD3-201ENST00000234179 ERC1Q8IUD2 1116 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 BICC1Q9H694 974 aaKnown RBP2.8□□□□□ -1.96
PRKD3-201ENST00000234179 ZNF287Q9HBT7 754 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 RAI14Q9P0K7 980 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 ZBTB21Q9ULJ3 1066 aa2.8□□□□□ -1.96
PRKD3-201ENST00000234179 SCAF8Q9UPN6 1271 aaKnown RBP2.8□□□□□ -1.96
PRKD3-201ENST00000234179 EFCAB14O75071 495 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 MS4A1P11836 297 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 POU3F3P20264 500 aaPredicted RBP2.79□□□□□ -1.96
PRKD3-201ENST00000234179 CTGFP29279 349 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 ARID4AP29374 1257 aaPredicted RBP2.79□□□□□ -1.96
PRKD3-201ENST00000234179 TCP10Q12799 353 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 COG2Q14746 738 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 TKFCQ3LXA3 575 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 BRDTQ58F21 947 aaPredicted RBP2.79□□□□□ -1.96
PRKD3-201ENST00000234179 CCDC102BQ68D86 513 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 SLC39A5Q6ZMH5 540 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 ZNF594Q96JF6 807 aaPredicted RBP2.79□□□□□ -1.96
PRKD3-201ENST00000234179 GUCD1Q96NT3 240 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 CYBAP13498 195 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 CACNB3P54284 484 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 NFIAQ12857 509 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 KCTD2Q14681 263 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 LRRFIP1Q32MZ4 808 aaKnown RBP2.79□□□□□ -1.96
PRKD3-201ENST00000234179 EPHA10Q5JZY3 1008 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 TATDN1Q6P1N9 297 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 ANKRD33Q7Z3H0 272 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 CCDC155Q8N6L0 562 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 TSR2Q969E8 191 aaKnown RBP2.79□□□□□ -1.96
PRKD3-201ENST00000234179 LRP2BPQ9P2M1 347 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 ABCF2Q9UG63 623 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 FAM184BQ9ULE4 1060 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 PFASO15067 1338 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 WDR46O15213 610 aaKnown RBP2.79□□□□□ -1.96
PRKD3-201ENST00000234179 ANP32CO43423 234 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 SUPT20HL2P0C7V6 817 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 RFX5P48382 616 aaPredicted RBP2.79□□□□□ -1.96
PRKD3-201ENST00000234179 CAP1Q01518 475 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 CATSPERGQ6ZRH7 1159 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 TIFAQ96CG3 184 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 GLT1D1Q96MS3 346 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 P2RX7Q99572 595 aaKnown RBP2.79□□□□□ -1.96
PRKD3-201ENST00000234179 ATP11BQ9Y2G3 1177 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 MGAMO43451 1857 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 TNKSO95271 1327 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 A0A0U1RQG5 324 aaPredicted RBP2.79□□□□□ -1.96
PRKD3-201ENST00000234179 NCK2O43639 380 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 KPNA6O60684 536 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 FCER1AP12319 257 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 NUBP1P53384 320 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 RHBDL3P58872 404 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 MAP3K12Q12852 859 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 DIXDC1Q155Q3 683 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 SPATA5Q8NB90 893 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 DIS3LQ8TF46 1054 aaKnown RBP2.79□□□□□ -1.96
PRKD3-201ENST00000234179 PUS3Q9BZE2 481 aaKnown RBP2.79□□□□□ -1.96
PRKD3-201ENST00000234179 SENP6Q9GZR1 1112 aaPredicted RBP2.79□□□□□ -1.96
PRKD3-201ENST00000234179 PDLIM7Q9NR12 457 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 RBPJLQ9UBG7 517 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 SERPINB13Q9UIV8 391 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 FZD1Q9UP38 647 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 Q9Y3F1 56 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 SPEF2Q9C093 1822 aa2.79□□□□□ -1.96
PRKD3-201ENST00000234179 KIF28PB7ZC32 967 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 PITPNM1O00562 1244 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms