RNA–Protein interactions for RNA: ENST00000231136.3

PCDHB6-201, Transcript of protocadherin beta 6, humanhuman

APPRIS P1 BASIC

Gene PCDHB6, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6-201ENST00000231136 MPHOSPH10O00566 681 aaKnown RBP15.04■□□□□ -0
PCDHB6-201ENST00000231136 NR1I2O75469 434 aa15.04■□□□□ -0
PCDHB6-201ENST00000231136 ZRSR1Q15695 479 aaKnown RBP15.04■□□□□ -0
PCDHB6-201ENST00000231136 LRRC47Q8N1G4 583 aaKnown RBP15.04■□□□□ -0
PCDHB6-201ENST00000231136 FBXL16Q8N461 479 aa15.04■□□□□ -0
PCDHB6-201ENST00000231136 SRBD1Q8N5C6 995 aaKnown RBP15.04■□□□□ -0
PCDHB6-201ENST00000231136 UPF1Q92900 1129 aaKnown RBP eCLIP15.04■□□□□ -0
PCDHB6-201ENST00000231136 MRVI1Q9Y6F6 885 aa15.04■□□□□ -0
PCDHB6-201ENST00000231136 NRXN2Q9P2S2 1712 aa15.04■□□□□ -0
PCDHB6-201ENST00000231136 GAKO14976 1311 aa15.04■□□□□ -0
PCDHB6-201ENST00000231136 DHX16O60231 1041 aaKnown RBP15.04■□□□□ -0
PCDHB6-201ENST00000231136 AKR1B1P15121 316 aa15.04■□□□□ -0
PCDHB6-201ENST00000231136 MARCKSP29966 332 aaPredicted RBP15.04■□□□□ -0
PCDHB6-201ENST00000231136 SSRP1Q08945 709 aaKnown RBP15.04■□□□□ -0
PCDHB6-201ENST00000231136 FAM13BQ9NYF5 915 aa15.04■□□□□ -0
PCDHB6-201ENST00000231136 CCDC39Q9UFE4 941 aa15.04■□□□□ -0
PCDHB6-201ENST00000231136 COL4A5P29400 1685 aa15.03■□□□□ -0
PCDHB6-201ENST00000231136 CATIPQ7Z7H3 387 aa15.03■□□□□ -0
PCDHB6-201ENST00000231136 CEP95Q96GE4 821 aa15.03■□□□□ -0
PCDHB6-201ENST00000231136 SBK1Q52WX2 424 aa15.03■□□□□ -0
PCDHB6-201ENST00000231136 USP17L2Q6R6M4 530 aa15.03■□□□□ -0
PCDHB6-201ENST00000231136 GPKOWQ92917 476 aaPredicted RBP eCLIP15.03■□□□□ -0
PCDHB6-201ENST00000231136 SDF4Q9BRK5 362 aa15.03■□□□□ -0
PCDHB6-201ENST00000231136 TRIM5Q9C035 493 aa15.03■□□□□ -0
PCDHB6-201ENST00000231136 SLC3A2P08195 630 aaKnown RBP15.02■□□□□ -0
PCDHB6-201ENST00000231136 CFAP100Q494V2 611 aa15.02■□□□□ -0
PCDHB6-201ENST00000231136 CCDC93Q567U6 631 aa15.02■□□□□ -0
PCDHB6-201ENST00000231136 CRACR2BQ8N4Y2 399 aaPredicted RBP15.02■□□□□ -0
PCDHB6-201ENST00000231136 SCAND2PQ9GZW5 306 aaPredicted RBP15.02■□□□□ -0
PCDHB6-201ENST00000231136 DNAJC25Q9H1X3 360 aa15.02■□□□□ -0
PCDHB6-201ENST00000231136 LTBP1Q14766 1721 aa15.02■□□□□ -0
PCDHB6-201ENST00000231136 SLC35G1Q2M3R5 365 aa15.02□□□□□ -0.01
PCDHB6-201ENST00000231136 ANO6Q4KMQ2 910 aa15.02□□□□□ -0.01
PCDHB6-201ENST00000231136 STRIP1Q5VSL9 837 aa15.02□□□□□ -0.01
PCDHB6-201ENST00000231136 SH3BP5LQ7L8J4 393 aa15.02□□□□□ -0.01
PCDHB6-201ENST00000231136 UBA5Q9GZZ9 404 aa15.02□□□□□ -0.01
PCDHB6-201ENST00000231136 PIM2Q9P1W9 311 aa15.02□□□□□ -0.01
PCDHB6-201ENST00000231136 FRMPD2Q68DX3 1309 aaPredicted RBP15.02□□□□□ -0.01
PCDHB6-201ENST00000231136 BIN1O00499 593 aa15.02□□□□□ -0.01
PCDHB6-201ENST00000231136 GDF11O95390 407 aa15.02□□□□□ -0.01
PCDHB6-201ENST00000231136 HMGB2P26583 209 aaKnown RBP15.02□□□□□ -0.01
PCDHB6-201ENST00000231136 POLD1P28340 1107 aa15.02□□□□□ -0.01
PCDHB6-201ENST00000231136 EARS2Q5JPH6 523 aaKnown RBP15.02□□□□□ -0.01
PCDHB6-201ENST00000231136 SPECC1Q5M775 1068 aa15.02□□□□□ -0.01
PCDHB6-201ENST00000231136 PNMA1Q8ND90 353 aa15.02□□□□□ -0.01
PCDHB6-201ENST00000231136 TMEM47Q9BQJ4 181 aa15.02□□□□□ -0.01
PCDHB6-201ENST00000231136 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.02□□□□□ -0.01
PCDHB6-201ENST00000231136 CCDC88AQ3V6T2 1871 aa15.02□□□□□ -0.01
PCDHB6-201ENST00000231136 FGRP09769 529 aa15.01□□□□□ -0.01
PCDHB6-201ENST00000231136 PRELPP51888 382 aa15.01□□□□□ -0.01
PCDHB6-201ENST00000231136 HOMER1Q86YM7 354 aa15.01□□□□□ -0.01
PCDHB6-201ENST00000231136 AMOTL1Q8IY63 956 aa15.01□□□□□ -0.01
PCDHB6-201ENST00000231136 VEZTQ9HBM0 779 aa15.01□□□□□ -0.01
PCDHB6-201ENST00000231136 FAM198AQ9UFP1 575 aa15.01□□□□□ -0.01
PCDHB6-201ENST00000231136 ORC4O43929 436 aa15.01□□□□□ -0.01
PCDHB6-201ENST00000231136 KIF23Q02241 960 aaPredicted RBP15.01□□□□□ -0.01
PCDHB6-201ENST00000231136 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.01□□□□□ -0.01
PCDHB6-201ENST00000231136 KAT14Q9H8E8 782 aa15.01□□□□□ -0.01
PCDHB6-201ENST00000231136 WDR19Q8NEZ3 1342 aa15.01□□□□□ -0.01
PCDHB6-201ENST00000231136 CPLX2Q6PUV4 134 aaKnown RBP15□□□□□ -0.01
PCDHB6-201ENST00000231136 CCDC84Q86UT8 332 aaPredicted RBP15□□□□□ -0.01
PCDHB6-201ENST00000231136 FAM163AQ96GL9 167 aaPredicted RBP15□□□□□ -0.01
PCDHB6-201ENST00000231136 DNAJC18Q9H819 358 aa15□□□□□ -0.01
PCDHB6-201ENST00000231136 CCDC73Q6ZRK6 1079 aa15□□□□□ -0.01
PCDHB6-201ENST00000231136 MTFR1LQ9H019 292 aa15□□□□□ -0.01
PCDHB6-201ENST00000231136 KIF3AQ9Y496 699 aa15□□□□□ -0.01
PCDHB6-201ENST00000231136 ASTN2O75129 1339 aaPredicted RBP15□□□□□ -0.01
PCDHB6-201ENST00000231136 C10orf71Q711Q0 1435 aa15□□□□□ -0.01
PCDHB6-201ENST00000231136 BECN2A8MW95 431 aa15□□□□□ -0.01
PCDHB6-201ENST00000231136 WNT7AO00755 349 aa15□□□□□ -0.01
PCDHB6-201ENST00000231136 JAG1P78504 1218 aa15□□□□□ -0.01
PCDHB6-201ENST00000231136 TYRO3Q06418 890 aa15□□□□□ -0.01
PCDHB6-201ENST00000231136 STK38Q15208 465 aa15□□□□□ -0.01
PCDHB6-201ENST00000231136 DALRD3Q5D0E6 543 aaKnown RBP15□□□□□ -0.01
PCDHB6-201ENST00000231136 MIGA2Q7L4E1 593 aa15□□□□□ -0.01
PCDHB6-201ENST00000231136 CCAR1Q8IX12 1150 aaKnown RBP15□□□□□ -0.01
PCDHB6-201ENST00000231136 RASGRP4Q8TDF6 673 aa15□□□□□ -0.01
PCDHB6-201ENST00000231136 OSBPL5Q9H0X9 879 aaPredicted RBP15□□□□□ -0.01
PCDHB6-201ENST00000231136 FZD1Q9UP38 647 aa15□□□□□ -0.01
PCDHB6-201ENST00000231136 GJA3Q9Y6H8 435 aa15□□□□□ -0.01
PCDHB6-201ENST00000231136 IFNAR1P17181 557 aa14.99□□□□□ -0.01
PCDHB6-201ENST00000231136 CXCL9Q07325 125 aa14.99□□□□□ -0.01
PCDHB6-201ENST00000231136 PKN1Q16512 942 aa14.99□□□□□ -0.01
PCDHB6-201ENST00000231136 SAMD1Q6SPF0 538 aaPredicted RBP14.99□□□□□ -0.01
PCDHB6-201ENST00000231136 ZKSCAN5Q9Y2L8 839 aa14.99□□□□□ -0.01
PCDHB6-201ENST00000231136 LRRC37AA6NMS7 1700 aa14.99□□□□□ -0.01
PCDHB6-201ENST00000231136 NFKBIEO00221 500 aa14.99□□□□□ -0.01
PCDHB6-201ENST00000231136 FMNL1O95466 1100 aaPredicted RBP14.99□□□□□ -0.01
PCDHB6-201ENST00000231136 NBPF9Q3BBW0 867 aa14.99□□□□□ -0.01
PCDHB6-201ENST00000231136 SLF2Q8IX21 1173 aa14.99□□□□□ -0.01
PCDHB6-201ENST00000231136 CLIP2Q9UDT6 1046 aa14.99□□□□□ -0.01
PCDHB6-201ENST00000231136 A0A1B0GVL5 298 aa14.98□□□□□ -0.01
PCDHB6-201ENST00000231136 PRAMEF18Q5VWM3 479 aa14.98□□□□□ -0.01
PCDHB6-201ENST00000231136 C16orf86Q6ZW13 317 aa14.98□□□□□ -0.01
PCDHB6-201ENST00000231136 DIS3L2Q8IYB7 885 aaKnown RBP14.98□□□□□ -0.01
PCDHB6-201ENST00000231136 CFAP45Q9UL16 551 aa14.98□□□□□ -0.01
PCDHB6-201ENST00000231136 USP17L5A8MUK1 530 aa14.98□□□□□ -0.01
PCDHB6-201ENST00000231136 GOLGA6L19H0YKK7 550 aa14.98□□□□□ -0.01
PCDHB6-201ENST00000231136 KINO60870 393 aaKnown RBP14.98□□□□□ -0.01
PCDHB6-201ENST00000231136 LETM1O95202 739 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms