RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 CALM3P0DP25 149 aa12.42□□□□□ -0.42
CDCA3-201ENST00000229265 MAP2K1Q02750 393 aaPredicted RBP12.42□□□□□ -0.42
CDCA3-201ENST00000229265 STK3Q13188 491 aa12.42□□□□□ -0.42
CDCA3-201ENST00000229265 UVSSAQ2YD98 709 aa12.42□□□□□ -0.42
CDCA3-201ENST00000229265 BRAPQ7Z569 592 aa12.42□□□□□ -0.42
CDCA3-201ENST00000229265 OGFOD1Q8N543 542 aa12.42□□□□□ -0.42
CDCA3-201ENST00000229265 TCEANC2Q96MN5 208 aa12.42□□□□□ -0.42
CDCA3-201ENST00000229265 PTPN18Q99952 460 aa12.42□□□□□ -0.42
CDCA3-201ENST00000229265 GZF1Q9H116 711 aaPredicted RBP12.42□□□□□ -0.42
CDCA3-201ENST00000229265 ARMT1Q9H993 441 aa12.42□□□□□ -0.42
CDCA3-201ENST00000229265 RCOR1Q9UKL0 485 aa12.42□□□□□ -0.42
CDCA3-201ENST00000229265 KLF18A0A0U1RQI7 1052 aa12.41□□□□□ -0.42
CDCA3-201ENST00000229265 PTPDC1A2A3K4 754 aa12.41□□□□□ -0.42
CDCA3-201ENST00000229265 IGF2BP3O00425 579 aaKnown RBP eCLIP12.41□□□□□ -0.42
CDCA3-201ENST00000229265 CTDNEP1O95476 244 aa12.41□□□□□ -0.42
CDCA3-201ENST00000229265 TBC1D8O95759 1140 aa12.41□□□□□ -0.42
CDCA3-201ENST00000229265 XRCC6P12956 609 aaKnown RBP eCLIP12.41□□□□□ -0.42
CDCA3-201ENST00000229265 PLCG2P16885 1265 aa12.41□□□□□ -0.42
CDCA3-201ENST00000229265 ANTXR2P58335 489 aa12.41□□□□□ -0.42
CDCA3-201ENST00000229265 HAND2P61296 217 aa12.41□□□□□ -0.42
CDCA3-201ENST00000229265 PPARAQ07869 468 aa12.41□□□□□ -0.42
CDCA3-201ENST00000229265 NOGQ13253 232 aa12.41□□□□□ -0.42
CDCA3-201ENST00000229265 CCDC183Q5T5S1 534 aa12.41□□□□□ -0.42
CDCA3-201ENST00000229265 CAVIN1Q6NZI2 390 aaKnown RBP12.41□□□□□ -0.42
CDCA3-201ENST00000229265 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.41□□□□□ -0.42
CDCA3-201ENST00000229265 SH3BP5LQ7L8J4 393 aa12.41□□□□□ -0.42
CDCA3-201ENST00000229265 FBXO18Q8NFZ0 1043 aa12.41□□□□□ -0.42
CDCA3-201ENST00000229265 CDK5RAP2Q96SN8 1893 aa12.41□□□□□ -0.42
CDCA3-201ENST00000229265 MRIQ9BWK5 157 aa12.41□□□□□ -0.42
CDCA3-201ENST00000229265 NBPF3Q9H094 633 aa12.41□□□□□ -0.42
CDCA3-201ENST00000229265 ZNF287Q9HBT7 754 aa12.41□□□□□ -0.42
CDCA3-201ENST00000229265 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.41□□□□□ -0.42
CDCA3-201ENST00000229265 HPS5Q9UPZ3 1129 aa12.41□□□□□ -0.42
CDCA3-201ENST00000229265 DAGLAQ9Y4D2 1042 aa12.41□□□□□ -0.42
CDCA3-201ENST00000229265 MKI67P46013 3256 aaKnown RBP12.41□□□□□ -0.42
CDCA3-201ENST00000229265 CCDC69A6NI79 296 aa12.4□□□□□ -0.42
CDCA3-201ENST00000229265 IFIT3O14879 490 aaKnown RBP12.4□□□□□ -0.42
CDCA3-201ENST00000229265 ZBTB43O43298 467 aa12.4□□□□□ -0.42
CDCA3-201ENST00000229265 ORC4O43929 436 aa12.4□□□□□ -0.42
CDCA3-201ENST00000229265 LDHBP07195 334 aaKnown RBP12.4□□□□□ -0.42
CDCA3-201ENST00000229265 RBM5P52756 815 aaKnown RBP eCLIP12.4□□□□□ -0.42
CDCA3-201ENST00000229265 MECOMQ03112 1051 aa12.4□□□□□ -0.42
CDCA3-201ENST00000229265 DNM1Q05193 864 aaKnown RBP12.4□□□□□ -0.42
CDCA3-201ENST00000229265 RESTQ13127 1097 aa12.4□□□□□ -0.42
CDCA3-201ENST00000229265 SPRYD7Q5W111 196 aa12.4□□□□□ -0.42
CDCA3-201ENST00000229265 APOBEC3FQ8IUX4 373 aaKnown RBP12.4□□□□□ -0.42
CDCA3-201ENST00000229265 LCORLQ8N3X6 602 aa12.4□□□□□ -0.42
CDCA3-201ENST00000229265 MAP3K14Q99558 947 aa12.4□□□□□ -0.42
CDCA3-201ENST00000229265 EPB41L4AQ9HCS5 686 aaPredicted RBP12.4□□□□□ -0.42
CDCA3-201ENST00000229265 ARPP21Q9UBL0 812 aaPredicted RBP12.4□□□□□ -0.42
CDCA3-201ENST00000229265 FAM198AQ9UFP1 575 aa12.4□□□□□ -0.42
CDCA3-201ENST00000229265 BRPF3Q9ULD4 1205 aa12.4□□□□□ -0.42
CDCA3-201ENST00000229265 SLC12A7Q9Y666 1083 aa12.4□□□□□ -0.42
CDCA3-201ENST00000229265 STK36Q9NRP7 1315 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 GOLGA6L4A6NEF3 574 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 CAVIN2O95810 425 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 IFNAR1P17181 557 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 METAP2P50579 478 aaKnown RBP eCLIP12.39□□□□□ -0.43
CDCA3-201ENST00000229265 COL9A3Q14050 684 aaPredicted RBP12.39□□□□□ -0.43
CDCA3-201ENST00000229265 TTLL12Q14166 644 aaPredicted RBP12.39□□□□□ -0.43
CDCA3-201ENST00000229265 WTAPQ15007 396 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 MAP3K11Q16584 847 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 TMEM67Q5HYA8 995 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 CDC42EP5Q6NZY7 148 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 APOA5Q6Q788 366 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 CYB5R4Q7L1T6 521 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 IQCA1Q86XH1 822 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 TBC1D10CQ8IV04 446 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 AMOTL1Q8IY63 956 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 FAM177A1Q8N128 213 aaPredicted RBP12.39□□□□□ -0.43
CDCA3-201ENST00000229265 ABHD8Q96I13 439 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 WNK4Q96J92 1243 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 NOL10Q9BSC4 688 aaKnown RBP12.39□□□□□ -0.43
CDCA3-201ENST00000229265 MCOLN1Q9GZU1 580 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 LY9Q9HBG7 655 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 DDX4Q9NQI0 724 aaKnown RBP12.39□□□□□ -0.43
CDCA3-201ENST00000229265 SERPINA10Q9UK55 444 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 HDAC9Q9UKV0 1011 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 CNPY2Q9Y2B0 182 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 ATRNL1Q5VV63 1379 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 DOCK2Q92608 1830 aa12.39□□□□□ -0.43
CDCA3-201ENST00000229265 B4E1Z4 1266 aa12.38□□□□□ -0.43
CDCA3-201ENST00000229265 FDPSP14324 419 aaKnown RBP12.38□□□□□ -0.43
CDCA3-201ENST00000229265 CCT2P78371 535 aaKnown RBP12.38□□□□□ -0.43
CDCA3-201ENST00000229265 PDE4BQ07343 736 aa12.38□□□□□ -0.43
CDCA3-201ENST00000229265 RRP1BQ14684 758 aaKnown RBP12.38□□□□□ -0.43
CDCA3-201ENST00000229265 FOXD4L5Q5VV16 416 aaPredicted RBP12.38□□□□□ -0.43
CDCA3-201ENST00000229265 FOXD4L4Q8WXT5 416 aaPredicted RBP12.38□□□□□ -0.43
CDCA3-201ENST00000229265 ANKS1AQ92625 1134 aa12.38□□□□□ -0.43
CDCA3-201ENST00000229265 SPATA32Q96LK8 384 aa12.38□□□□□ -0.43
CDCA3-201ENST00000229265 ZDHHC15Q96MV8 337 aa12.38□□□□□ -0.43
CDCA3-201ENST00000229265 LRRC2Q9BYS8 371 aa12.38□□□□□ -0.43
CDCA3-201ENST00000229265 RBM28Q9NW13 759 aaKnown RBP12.38□□□□□ -0.43
CDCA3-201ENST00000229265 TMEM63CQ9P1W3 806 aa12.38□□□□□ -0.43
CDCA3-201ENST00000229265 ORC3Q9UBD5 711 aaPredicted RBP12.38□□□□□ -0.43
CDCA3-201ENST00000229265 PHIPQ8WWQ0 1821 aa12.38□□□□□ -0.43
CDCA3-201ENST00000229265 GOLGA8BA8MQT2 603 aa12.37□□□□□ -0.43
CDCA3-201ENST00000229265 CTAGE5O15320 804 aa12.37□□□□□ -0.43
CDCA3-201ENST00000229265 JAK2O60674 1132 aa12.37□□□□□ -0.43
CDCA3-201ENST00000229265 KDM4AO75164 1064 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 217.5 ms