RNA–Protein interactions for RNA: ENST00000226524.3

PF4V1-201, Transcript of platelet factor 4 variant 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PF4V1, Length 522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1-201ENST00000226524 SIPA1L1O43166 1804 aa12.95□□□□□ -0.34
PF4V1-201ENST00000226524 TNRC18O15417 2968 aaPredicted RBP12.94□□□□□ -0.34
PF4V1-201ENST00000226524 MBD4O95243 580 aa12.94□□□□□ -0.34
PF4V1-201ENST00000226524 SGPL1O95470 568 aa12.94□□□□□ -0.34
PF4V1-201ENST00000226524 INHAP05111 366 aa12.94□□□□□ -0.34
PF4V1-201ENST00000226524 XRCC5P13010 732 aaKnown RBP12.94□□□□□ -0.34
PF4V1-201ENST00000226524 GNAT2P19087 354 aa12.94□□□□□ -0.34
PF4V1-201ENST00000226524 PLCD1P51178 756 aa12.94□□□□□ -0.34
PF4V1-201ENST00000226524 ERVK-9P63128 1117 aa12.94□□□□□ -0.34
PF4V1-201ENST00000226524 ERVK-24P63145 666 aa12.94□□□□□ -0.34
PF4V1-201ENST00000226524 GABPAQ06546 454 aa12.94□□□□□ -0.34
PF4V1-201ENST00000226524 MTFR1Q15390 333 aa12.94□□□□□ -0.34
PF4V1-201ENST00000226524 LCORLQ8N3X6 602 aa12.94□□□□□ -0.34
PF4V1-201ENST00000226524 U2AF1L4Q8WU68 220 aaKnown RBP12.94□□□□□ -0.34
PF4V1-201ENST00000226524 SDR42E1Q8WUS8 393 aa12.94□□□□□ -0.34
PF4V1-201ENST00000226524 LPAR1Q92633 364 aa12.94□□□□□ -0.34
PF4V1-201ENST00000226524 ARMT1Q9H993 441 aa12.94□□□□□ -0.34
PF4V1-201ENST00000226524 EMILIN3Q9NT22 766 aa12.94□□□□□ -0.34
PF4V1-201ENST00000226524 ARPP21Q9UBL0 812 aaPredicted RBP12.94□□□□□ -0.34
PF4V1-201ENST00000226524 TTC41PQ6P2S7 1318 aa12.93□□□□□ -0.34
PF4V1-201ENST00000226524 SLC34A2O95436 690 aa12.93□□□□□ -0.34
PF4V1-201ENST00000226524 TFRCP02786 760 aaKnown RBP12.93□□□□□ -0.34
PF4V1-201ENST00000226524 SHMT1P34896 483 aa12.93□□□□□ -0.34
PF4V1-201ENST00000226524 RGS2P41220 211 aa12.93□□□□□ -0.34
PF4V1-201ENST00000226524 C20orf194Q5TEA3 1177 aa12.93□□□□□ -0.34
PF4V1-201ENST00000226524 GIMAP6Q6P9H5 292 aa12.93□□□□□ -0.34
PF4V1-201ENST00000226524 LBX2Q6XYB7 198 aa12.93□□□□□ -0.34
PF4V1-201ENST00000226524 CATSPERGQ6ZRH7 1159 aa12.93□□□□□ -0.34
PF4V1-201ENST00000226524 ANKLE1Q8NAG6 615 aa12.93□□□□□ -0.34
PF4V1-201ENST00000226524 HMX1Q9NP08 348 aaPredicted RBP12.93□□□□□ -0.34
PF4V1-201ENST00000226524 NR2E3Q9Y5X4 410 aa12.93□□□□□ -0.34
PF4V1-201ENST00000226524 SLC4A4Q9Y6R1 1079 aa12.93□□□□□ -0.34
PF4V1-201ENST00000226524 IVNS1ABPQ9Y6Y0 642 aa12.93□□□□□ -0.34
PF4V1-201ENST00000226524 HTTP42858 3142 aa12.93□□□□□ -0.34
PF4V1-201ENST00000226524 NAV1Q8NEY1 1877 aa12.93□□□□□ -0.34
PF4V1-201ENST00000226524 ZSWIM8A7E2V4 1837 aa12.92□□□□□ -0.34
PF4V1-201ENST00000226524 RPTORQ8N122 1335 aa12.92□□□□□ -0.34
PF4V1-201ENST00000226524 ELNP15502 786 aa12.92□□□□□ -0.34
PF4V1-201ENST00000226524 VCAM1P19320 739 aa12.92□□□□□ -0.34
PF4V1-201ENST00000226524 C12orf60Q5U649 245 aa12.92□□□□□ -0.34
PF4V1-201ENST00000226524 PLEKHH3Q7Z736 793 aa12.92□□□□□ -0.34
PF4V1-201ENST00000226524 MB21D1Q8N884 522 aa12.92□□□□□ -0.34
PF4V1-201ENST00000226524 KBTBD3Q8NAB2 608 aa12.92□□□□□ -0.34
PF4V1-201ENST00000226524 DPF3Q92784 378 aa12.92□□□□□ -0.34
PF4V1-201ENST00000226524 PAGR1Q9BTK6 254 aa12.92□□□□□ -0.34
PF4V1-201ENST00000226524 FARP2O94887 1054 aaPredicted RBP12.91□□□□□ -0.34
PF4V1-201ENST00000226524 JAG1P78504 1218 aa12.91□□□□□ -0.34
PF4V1-201ENST00000226524 COG2Q14746 738 aa12.91□□□□□ -0.34
PF4V1-201ENST00000226524 SEPT2Q15019 361 aa12.91□□□□□ -0.34
PF4V1-201ENST00000226524 ZYXQ15942 572 aaKnown RBP12.91□□□□□ -0.34
PF4V1-201ENST00000226524 APPBP2Q92624 585 aa12.91□□□□□ -0.34
PF4V1-201ENST00000226524 EDC3Q96F86 508 aaKnown RBP12.91□□□□□ -0.34
PF4V1-201ENST00000226524 UNC93B1Q9H1C4 597 aa12.91□□□□□ -0.34
PF4V1-201ENST00000226524 KANSL2Q9H9L4 492 aa12.91□□□□□ -0.34
PF4V1-201ENST00000226524 PAK6Q9NQU5 681 aaPredicted RBP12.91□□□□□ -0.34
PF4V1-201ENST00000226524 SLC5A4Q9NY91 659 aa12.91□□□□□ -0.34
PF4V1-201ENST00000226524 RBPJLQ9UBG7 517 aa12.91□□□□□ -0.34
PF4V1-201ENST00000226524 GJD2Q9UKL4 321 aa12.91□□□□□ -0.34
PF4V1-201ENST00000226524 USP17L12C9JPN9 530 aa12.9□□□□□ -0.34
PF4V1-201ENST00000226524 USP17L21D6R901 530 aa12.9□□□□□ -0.34
PF4V1-201ENST00000226524 STRNO43815 780 aa12.9□□□□□ -0.34
PF4V1-201ENST00000226524 SMARCA5O60264 1052 aaPredicted RBP12.9□□□□□ -0.34
PF4V1-201ENST00000226524 ZKSCAN1P17029 563 aaPredicted RBP12.9□□□□□ -0.34
PF4V1-201ENST00000226524 RRP1P56182 461 aaKnown RBP12.9□□□□□ -0.34
PF4V1-201ENST00000226524 ICA1Q05084 483 aa12.9□□□□□ -0.34
PF4V1-201ENST00000226524 C16orf86Q6ZW13 317 aa12.9□□□□□ -0.34
PF4V1-201ENST00000226524 GPR142Q7Z601 462 aa12.9□□□□□ -0.34
PF4V1-201ENST00000226524 DEFB118Q96PH6 123 aa12.9□□□□□ -0.34
PF4V1-201ENST00000226524 APBA2Q99767 749 aa12.9□□□□□ -0.34
PF4V1-201ENST00000226524 NACAP1Q9BZK3 213 aa12.9□□□□□ -0.34
PF4V1-201ENST00000226524 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.9□□□□□ -0.34
PF4V1-201ENST00000226524 RPAP3Q9H6T3 665 aaPredicted RBP12.9□□□□□ -0.34
PF4V1-201ENST00000226524 GOPCQ9HD26 462 aa12.9□□□□□ -0.34
PF4V1-201ENST00000226524 DDX60LQ5H9U9 1706 aaKnown RBP12.89□□□□□ -0.35
PF4V1-201ENST00000226524 WDR46O15213 610 aaKnown RBP12.89□□□□□ -0.35
PF4V1-201ENST00000226524 RNF113AO15541 343 aaKnown RBP12.89□□□□□ -0.35
PF4V1-201ENST00000226524 SLC3A2P08195 630 aaKnown RBP12.89□□□□□ -0.35
PF4V1-201ENST00000226524 CYP2B6P20813 491 aa12.89□□□□□ -0.35
PF4V1-201ENST00000226524 CDK8P49336 464 aa12.89□□□□□ -0.35
PF4V1-201ENST00000226524 SBK1Q52WX2 424 aa12.89□□□□□ -0.35
PF4V1-201ENST00000226524 WDR78Q5VTH9 848 aa12.89□□□□□ -0.35
PF4V1-201ENST00000226524 MFSD14CQ5VZR4 134 aa12.89□□□□□ -0.35
PF4V1-201ENST00000226524 NECAB2Q7Z6G3 386 aa12.89□□□□□ -0.35
PF4V1-201ENST00000226524 TICAM2Q86XR7 235 aa12.89□□□□□ -0.35
PF4V1-201ENST00000226524 ACER1Q8TDN7 264 aa12.89□□□□□ -0.35
PF4V1-201ENST00000226524 SHISA4Q96DD7 197 aa12.89□□□□□ -0.35
PF4V1-201ENST00000226524 TANGO6Q9C0B7 1094 aa12.89□□□□□ -0.35
PF4V1-201ENST00000226524 CRISPLD2Q9H0B8 497 aa12.89□□□□□ -0.35
PF4V1-201ENST00000226524 MKNK2Q9HBH9 465 aa12.89□□□□□ -0.35
PF4V1-201ENST00000226524 TMX2Q9Y320 296 aa12.89□□□□□ -0.35
PF4V1-201ENST00000226524 MYH7P12883 1935 aa12.88□□□□□ -0.35
PF4V1-201ENST00000226524 CENPFP49454 3210 aa12.88□□□□□ -0.35
PF4V1-201ENST00000226524 SLC15A5A6NIM6 579 aa12.88□□□□□ -0.35
PF4V1-201ENST00000226524 PRKAB2O43741 272 aa12.88□□□□□ -0.35
PF4V1-201ENST00000226524 GUCY1A2P33402 732 aa12.88□□□□□ -0.35
PF4V1-201ENST00000226524 COPB2P35606 906 aa12.88□□□□□ -0.35
PF4V1-201ENST00000226524 MAP2K5Q13163 448 aa12.88□□□□□ -0.35
PF4V1-201ENST00000226524 SHROOM1Q2M3G4 852 aaPredicted RBP12.88□□□□□ -0.35
PF4V1-201ENST00000226524 PPP4R3BQ5MIZ7 849 aa12.88□□□□□ -0.35
PF4V1-201ENST00000226524 SHCBP1Q8NEM2 672 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms