RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 SPACA7Q96KW9 195 aa9.39□□□□□ -0.91
CCL1-201ENST00000225842 GPN3Q9UHW5 284 aaPredicted RBP9.39□□□□□ -0.91
CCL1-201ENST00000225842 ARHGEF28Q8N1W1 1705 aaKnown RBP9.39□□□□□ -0.91
CCL1-201ENST00000225842 NHSQ6T4R5 1651 aa9.39□□□□□ -0.91
CCL1-201ENST00000225842 KDM2BQ8NHM5 1336 aa9.38□□□□□ -0.91
CCL1-201ENST00000225842 TLR3O15455 904 aaKnown RBP9.38□□□□□ -0.91
CCL1-201ENST00000225842 KLF4O43474 513 aa9.38□□□□□ -0.91
CCL1-201ENST00000225842 MAP3K6O95382 1288 aa9.38□□□□□ -0.91
CCL1-201ENST00000225842 AVPP01185 164 aa9.38□□□□□ -0.91
CCL1-201ENST00000225842 IL2RBP14784 551 aa9.38□□□□□ -0.91
CCL1-201ENST00000225842 ZNF157P51786 506 aaPredicted RBP9.38□□□□□ -0.91
CCL1-201ENST00000225842 FAAP100Q0VG06 881 aa9.38□□□□□ -0.91
CCL1-201ENST00000225842 LAMC2Q13753 1193 aa9.38□□□□□ -0.91
CCL1-201ENST00000225842 COL9A2Q14055 689 aaPredicted RBP9.38□□□□□ -0.91
CCL1-201ENST00000225842 ARHGEF25Q86VW2 580 aa9.38□□□□□ -0.91
CCL1-201ENST00000225842 FLAD1Q8NFF5 587 aa9.38□□□□□ -0.91
CCL1-201ENST00000225842 ABHD17AQ96GS6 310 aa9.38□□□□□ -0.91
CCL1-201ENST00000225842 BHLHE41Q9C0J9 482 aaPredicted RBP9.38□□□□□ -0.91
CCL1-201ENST00000225842 RRAGCQ9HB90 399 aa9.38□□□□□ -0.91
CCL1-201ENST00000225842 PRDM10Q9NQV6 1147 aa9.38□□□□□ -0.91
CCL1-201ENST00000225842 SIRPGQ9P1W8 387 aa9.38□□□□□ -0.91
CCL1-201ENST00000225842 COL24A1Q17RW2 1714 aa9.38□□□□□ -0.91
CCL1-201ENST00000225842 AKAP12Q02952 1782 aa9.37□□□□□ -0.91
CCL1-201ENST00000225842 J3QW42 95 aa9.37□□□□□ -0.91
CCL1-201ENST00000225842 NFKBIEO00221 500 aa9.37□□□□□ -0.91
CCL1-201ENST00000225842 U2SURPO15042 1029 aaKnown RBP9.37□□□□□ -0.91
CCL1-201ENST00000225842 RAB33AQ14088 237 aa9.37□□□□□ -0.91
CCL1-201ENST00000225842 SEZ6Q53EL9 994 aa9.37□□□□□ -0.91
CCL1-201ENST00000225842 AGMOQ6ZNB7 445 aa9.37□□□□□ -0.91
CCL1-201ENST00000225842 HFE2Q6ZVN8 426 aa9.37□□□□□ -0.91
CCL1-201ENST00000225842 FBXO27Q8NI29 283 aa9.37□□□□□ -0.91
CCL1-201ENST00000225842 DDX54Q8TDD1 881 aaKnown RBP9.37□□□□□ -0.91
CCL1-201ENST00000225842 NXPE3Q969Y0 559 aa9.37□□□□□ -0.91
CCL1-201ENST00000225842 SRRTQ9BXP5 876 aaKnown RBP9.37□□□□□ -0.91
CCL1-201ENST00000225842 ZNF576Q9H609 170 aa9.37□□□□□ -0.91
CCL1-201ENST00000225842 PPT2Q9UMR5 302 aa9.37□□□□□ -0.91
CCL1-201ENST00000225842 R3HCC1Q9Y3T6 440 aaKnown RBP9.37□□□□□ -0.91
CCL1-201ENST00000225842 CCDC85CA6NKD9 419 aa9.36□□□□□ -0.91
CCL1-201ENST00000225842 PDE2AO00408 941 aaPredicted RBP9.36□□□□□ -0.91
CCL1-201ENST00000225842 FOXN1O15353 648 aa9.36□□□□□ -0.91
CCL1-201ENST00000225842 HOXD8P13378 290 aaPredicted RBP9.36□□□□□ -0.91
CCL1-201ENST00000225842 ATP11AP98196 1134 aa9.36□□□□□ -0.91
CCL1-201ENST00000225842 BNC2Q6ZN30 1099 aaPredicted RBP9.36□□□□□ -0.91
CCL1-201ENST00000225842 TMEM102Q8N9M5 508 aaPredicted RBP9.36□□□□□ -0.91
CCL1-201ENST00000225842 DCAF11Q8TEB1 546 aa9.36□□□□□ -0.91
CCL1-201ENST00000225842 MKL1Q969V6 931 aa9.36□□□□□ -0.91
CCL1-201ENST00000225842 ABHD8Q96I13 439 aa9.36□□□□□ -0.91
CCL1-201ENST00000225842 RASSF4Q9H2L5 321 aa9.36□□□□□ -0.91
CCL1-201ENST00000225842 IGFLR1Q9H665 355 aa9.36□□□□□ -0.91
CCL1-201ENST00000225842 PCDHB5Q9Y5E4 795 aa9.36□□□□□ -0.91
CCL1-201ENST00000225842 CPSF1Q10570 1443 aaKnown RBP9.36□□□□□ -0.91
CCL1-201ENST00000225842 F13A1P00488 732 aa9.35□□□□□ -0.91
CCL1-201ENST00000225842 NRLP54845 237 aa9.35□□□□□ -0.91
CCL1-201ENST00000225842 DBN1Q16643 649 aa9.35□□□□□ -0.91
CCL1-201ENST00000225842 KCNH5Q8NCM2 988 aa9.35□□□□□ -0.91
CCL1-201ENST00000225842 JARID2Q92833 1246 aaPredicted RBP9.35□□□□□ -0.91
CCL1-201ENST00000225842 NDFIP2Q9NV92 336 aa9.35□□□□□ -0.91
CCL1-201ENST00000225842 SNTG2Q9NY99 539 aa9.35□□□□□ -0.91
CCL1-201ENST00000225842 PRKAG3Q9UGI9 489 aa9.35□□□□□ -0.91
CCL1-201ENST00000225842 ABCC6O95255 1503 aa9.35□□□□□ -0.91
CCL1-201ENST00000225842 LOC102724428A0A0B4J2F2 783 aa9.34□□□□□ -0.91
CCL1-201ENST00000225842 SMAD7O15105 426 aaKnown RBP9.34□□□□□ -0.91
CCL1-201ENST00000225842 LMNB1P20700 586 aa9.34□□□□□ -0.91
CCL1-201ENST00000225842 CTCFP49711 727 aaPredicted RBP9.34□□□□□ -0.91
CCL1-201ENST00000225842 SIK1P57059 783 aa9.34□□□□□ -0.91
CCL1-201ENST00000225842 PTSQ03393 145 aa9.34□□□□□ -0.91
CCL1-201ENST00000225842 SLITRK4Q8IW52 837 aa9.34□□□□□ -0.91
CCL1-201ENST00000225842 SHDQ96IW2 340 aa9.34□□□□□ -0.91
CCL1-201ENST00000225842 DEPDC7Q96QD5 511 aa9.34□□□□□ -0.91
CCL1-201ENST00000225842 PBX4Q9BYU1 374 aa9.34□□□□□ -0.91
CCL1-201ENST00000225842 MUC3BQ9H195 1237 aa9.34□□□□□ -0.91
CCL1-201ENST00000225842 PLEKHG2Q9H7P9 1386 aa9.34□□□□□ -0.91
CCL1-201ENST00000225842 QSER1Q2KHR3 1735 aa9.34□□□□□ -0.92
CCL1-201ENST00000225842 SLC35F4A4IF30 521 aa9.33□□□□□ -0.92
CCL1-201ENST00000225842 FAM221BA6H8Z2 402 aa9.33□□□□□ -0.92
CCL1-201ENST00000225842 ZBTB42B2RXF5 422 aa9.33□□□□□ -0.92
CCL1-201ENST00000225842 H7C1W4 665 aa9.33□□□□□ -0.92
CCL1-201ENST00000225842 HMGB2P26583 209 aaKnown RBP9.33□□□□□ -0.92
CCL1-201ENST00000225842 MCM4P33991 863 aa9.33□□□□□ -0.92
CCL1-201ENST00000225842 RPS26P62854 115 aaKnown RBP9.33□□□□□ -0.92
CCL1-201ENST00000225842 TBC1D8BQ0IIM8 1120 aa9.33□□□□□ -0.92
CCL1-201ENST00000225842 FBXW10Q5XX13 1052 aa9.33□□□□□ -0.92
CCL1-201ENST00000225842 TRIM42Q8IWZ5 723 aa9.33□□□□□ -0.92
CCL1-201ENST00000225842 EFCC1Q9HA90 598 aa9.33□□□□□ -0.92
CCL1-201ENST00000225842 TMEM39AQ9NV64 488 aa9.33□□□□□ -0.92
CCL1-201ENST00000225842 BTAF1O14981 1849 aa9.33□□□□□ -0.92
CCL1-201ENST00000225842 SLIT3O75094 1523 aa9.32□□□□□ -0.92
CCL1-201ENST00000225842 KCPQ6ZWJ8 1503 aa9.32□□□□□ -0.92
CCL1-201ENST00000225842 TRPM1Q7Z4N2 1603 aa9.32□□□□□ -0.92
CCL1-201ENST00000225842 A0A0G2JLW4 131 aa9.32□□□□□ -0.92
CCL1-201ENST00000225842 AXIN1O15169 862 aa9.32□□□□□ -0.92
CCL1-201ENST00000225842 CLSTN1O94985 981 aa9.32□□□□□ -0.92
CCL1-201ENST00000225842 HSD3B2P26439 372 aa9.32□□□□□ -0.92
CCL1-201ENST00000225842 SEPT6Q14141 434 aa9.32□□□□□ -0.92
CCL1-201ENST00000225842 RPS26P11Q5JNZ5 115 aaPredicted RBP9.32□□□□□ -0.92
CCL1-201ENST00000225842 RASIP1Q5U651 963 aa9.32□□□□□ -0.92
CCL1-201ENST00000225842 PLD4Q96BZ4 506 aa9.32□□□□□ -0.92
CCL1-201ENST00000225842 GPATCH3Q96I76 525 aa9.32□□□□□ -0.92
CCL1-201ENST00000225842 MIR1-1HGQ9H1L0 117 aa9.32□□□□□ -0.92
CCL1-201ENST00000225842 USP47Q96K76 1375 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms