RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 HAUS7Q99871 368 aa19.83■□□□□ 0.77
EXTL3-201ENST00000220562 GINS2Q9Y248 185 aa19.83■□□□□ 0.77
EXTL3-201ENST00000220562 SERTAD1Q9UHV2 236 aa19.83■□□□□ 0.76
EXTL3-201ENST00000220562 MAGEA1P43355 309 aa19.83■□□□□ 0.76
EXTL3-201ENST00000220562 GKAP1Q5VSY0 366 aaPredicted RBP19.83■□□□□ 0.76
EXTL3-201ENST00000220562 CDCA7Q9BWT1 371 aaPredicted RBP19.82■□□□□ 0.76
EXTL3-201ENST00000220562 KRT19P08727 400 aa19.82■□□□□ 0.76
EXTL3-201ENST00000220562 PPP2R5DQ14738 602 aa19.82■□□□□ 0.76
EXTL3-201ENST00000220562 CPXCR1Q8N123 301 aa19.82■□□□□ 0.76
EXTL3-201ENST00000220562 PFDN4Q9NQP4 134 aa19.82■□□□□ 0.76
EXTL3-201ENST00000220562 FAM184BQ9ULE4 1060 aa19.82■□□□□ 0.76
EXTL3-201ENST00000220562 NOD1Q9Y239 953 aa19.82■□□□□ 0.76
EXTL3-201ENST00000220562 NDUFAB1O14561 156 aa19.82■□□□□ 0.76
EXTL3-201ENST00000220562 HSPA2P54652 639 aa19.82■□□□□ 0.76
EXTL3-201ENST00000220562 PPARAQ07869 468 aa19.82■□□□□ 0.76
EXTL3-201ENST00000220562 TYW1BQ6NUM6 668 aa19.82■□□□□ 0.76
EXTL3-201ENST00000220562 SYCE1Q8N0S2 351 aa19.82■□□□□ 0.76
EXTL3-201ENST00000220562 MKRN1Q9UHC7 482 aaKnown RBP19.82■□□□□ 0.76
EXTL3-201ENST00000220562 CFBP00751 764 aa19.82■□□□□ 0.76
EXTL3-201ENST00000220562 BCRP11274 1271 aa19.82■□□□□ 0.76
EXTL3-201ENST00000220562 UHRF1BP1Q6BDS2 1440 aa19.82■□□□□ 0.76
EXTL3-201ENST00000220562 DSCC1Q9BVC3 393 aa19.82■□□□□ 0.76
EXTL3-201ENST00000220562 ZNF445P59923 1031 aa19.82■□□□□ 0.76
EXTL3-201ENST00000220562 DCUN1D2Q6PH85 259 aa19.82■□□□□ 0.76
EXTL3-201ENST00000220562 ZNF408Q9H9D4 720 aa19.81■□□□□ 0.76
EXTL3-201ENST00000220562 WDR70Q9NW82 654 aa19.81■□□□□ 0.76
EXTL3-201ENST00000220562 HGSO14964 777 aaPredicted RBP19.81■□□□□ 0.76
EXTL3-201ENST00000220562 TFAP4Q01664 338 aa19.81■□□□□ 0.76
EXTL3-201ENST00000220562 PPP2R5BQ15173 497 aa19.81■□□□□ 0.76
EXTL3-201ENST00000220562 TAOK1Q7L7X3 1001 aa19.81■□□□□ 0.76
EXTL3-201ENST00000220562 LMBRD1Q9NUN5 540 aa19.81■□□□□ 0.76
EXTL3-201ENST00000220562 LMTK3Q96Q04 1460 aa19.81■□□□□ 0.76
EXTL3-201ENST00000220562 PER1O15534 1290 aaPredicted RBP19.81■□□□□ 0.76
EXTL3-201ENST00000220562 ZNF131P52739 623 aa19.81■□□□□ 0.76
EXTL3-201ENST00000220562 GOLGA6BA6NDN3 693 aa19.81■□□□□ 0.76
EXTL3-201ENST00000220562 ARHGAP6O43182 974 aa19.81■□□□□ 0.76
EXTL3-201ENST00000220562 NEDD9Q14511 834 aa19.81■□□□□ 0.76
EXTL3-201ENST00000220562 AZI2Q9H6S1 392 aa19.81■□□□□ 0.76
EXTL3-201ENST00000220562 ERCC6LQ2NKX8 1250 aa19.81■□□□□ 0.76
EXTL3-201ENST00000220562 GBP6Q6ZN66 633 aa19.81■□□□□ 0.76
EXTL3-201ENST00000220562 PRKG1Q13976 671 aa19.8■□□□□ 0.76
EXTL3-201ENST00000220562 ME3Q16798 604 aa19.8■□□□□ 0.76
EXTL3-201ENST00000220562 ARHGAP44Q17R89 818 aa19.8■□□□□ 0.76
EXTL3-201ENST00000220562 LSM14BQ9BX40 385 aaKnown RBP19.8■□□□□ 0.76
EXTL3-201ENST00000220562 RASSF4Q9H2L5 321 aa19.8■□□□□ 0.76
EXTL3-201ENST00000220562 GPHNQ9NQX3 736 aaPredicted RBP19.8■□□□□ 0.76
EXTL3-201ENST00000220562 SHANK2Q9UPX8 1470 aa19.8■□□□□ 0.76
EXTL3-201ENST00000220562 GIGYF1O75420 1035 aaPredicted RBP19.8■□□□□ 0.76
EXTL3-201ENST00000220562 LRMPQ12912 555 aa19.8■□□□□ 0.76
EXTL3-201ENST00000220562 RRAGAQ7L523 313 aa19.8■□□□□ 0.76
EXTL3-201ENST00000220562 CCDC105Q8IYK2 499 aa19.8■□□□□ 0.76
EXTL3-201ENST00000220562 STK32BQ9NY57 414 aa19.8■□□□□ 0.76
EXTL3-201ENST00000220562 RPS6KA1Q15418 735 aa19.8■□□□□ 0.76
EXTL3-201ENST00000220562 WDR62O43379 1518 aa19.8■□□□□ 0.76
EXTL3-201ENST00000220562 FLOT1O75955 427 aa19.79■□□□□ 0.76
EXTL3-201ENST00000220562 CFAP221Q4G0U5 840 aa19.79■□□□□ 0.76
EXTL3-201ENST00000220562 CMTR1Q8N1G2 835 aaKnown RBP19.79■□□□□ 0.76
EXTL3-201ENST00000220562 PLEKHA4Q9H4M7 779 aa19.79■□□□□ 0.76
EXTL3-201ENST00000220562 GABPAQ06546 454 aa19.79■□□□□ 0.76
EXTL3-201ENST00000220562 HHATQ5VTY9 493 aa19.79■□□□□ 0.76
EXTL3-201ENST00000220562 TPH2Q8IWU9 490 aa19.79■□□□□ 0.76
EXTL3-201ENST00000220562 FAM207AQ9NSI2 230 aaPredicted RBP19.79■□□□□ 0.76
EXTL3-201ENST00000220562 H0YIN7 160 aa19.79■□□□□ 0.76
EXTL3-201ENST00000220562 GBP1P32455 592 aa19.79■□□□□ 0.76
EXTL3-201ENST00000220562 ADKP55263 362 aaKnown RBP19.79■□□□□ 0.76
EXTL3-201ENST00000220562 PEX26Q7Z412 305 aa19.79■□□□□ 0.76
EXTL3-201ENST00000220562 RRAGDQ9NQL2 400 aaPredicted RBP19.79■□□□□ 0.76
EXTL3-201ENST00000220562 RPUSD2Q8IZ73 545 aaKnown RBP19.79■□□□□ 0.76
EXTL3-201ENST00000220562 TSKSQ9UJT2 592 aa19.79■□□□□ 0.76
EXTL3-201ENST00000220562 NAA25Q14CX7 972 aa19.79■□□□□ 0.76
EXTL3-201ENST00000220562 ARHGEF10O15013 1369 aa19.79■□□□□ 0.76
EXTL3-201ENST00000220562 PRPF6O94906 941 aaKnown RBP19.78■□□□□ 0.76
EXTL3-201ENST00000220562 PAK2Q13177 524 aa19.78■□□□□ 0.76
EXTL3-201ENST00000220562 LARGE2Q8N3Y3 721 aa19.78■□□□□ 0.76
EXTL3-201ENST00000220562 SMCO2A6NFE2 343 aa19.78■□□□□ 0.76
EXTL3-201ENST00000220562 NEURL1BA8MQ27 555 aa19.78■□□□□ 0.76
EXTL3-201ENST00000220562 NSMFQ6X4W1 530 aa19.78■□□□□ 0.76
EXTL3-201ENST00000220562 ORAI2Q96SN7 254 aa19.78■□□□□ 0.76
EXTL3-201ENST00000220562 EIF4A1P60842 406 aaKnown RBP19.78■□□□□ 0.76
EXTL3-201ENST00000220562 BRDTQ58F21 947 aaPredicted RBP19.78■□□□□ 0.76
EXTL3-201ENST00000220562 DNAJC10Q8IXB1 793 aa19.78■□□□□ 0.76
EXTL3-201ENST00000220562 TBC1D31Q96DN5 1066 aa19.78■□□□□ 0.76
EXTL3-201ENST00000220562 RUFY4Q6ZNE9 571 aa19.77■□□□□ 0.76
EXTL3-201ENST00000220562 RDH13Q8NBN7 331 aa19.77■□□□□ 0.76
EXTL3-201ENST00000220562 ARPP21Q9UBL0 812 aaPredicted RBP19.77■□□□□ 0.76
EXTL3-201ENST00000220562 ATP5JP18859 108 aa19.77■□□□□ 0.76
EXTL3-201ENST00000220562 REXO1Q8N1G1 1221 aaKnown RBP19.77■□□□□ 0.76
EXTL3-201ENST00000220562 MYRIPQ8NFW9 859 aa19.77■□□□□ 0.76
EXTL3-201ENST00000220562 EDC3Q96F86 508 aaKnown RBP19.77■□□□□ 0.76
EXTL3-201ENST00000220562 XPO4Q9C0E2 1151 aaKnown RBP19.77■□□□□ 0.76
EXTL3-201ENST00000220562 PLCB1Q9NQ66 1216 aa19.77■□□□□ 0.76
EXTL3-201ENST00000220562 IFIH1Q9BYX4 1025 aaKnown RBP19.77■□□□□ 0.76
EXTL3-201ENST00000220562 IVNS1ABPQ9Y6Y0 642 aa19.77■□□□□ 0.76
EXTL3-201ENST00000220562 FRMPD2Q68DX3 1309 aaPredicted RBP19.77■□□□□ 0.75
EXTL3-201ENST00000220562 CD19P15391 556 aa19.77■□□□□ 0.75
EXTL3-201ENST00000220562 CTSWP56202 376 aa19.77■□□□□ 0.75
EXTL3-201ENST00000220562 LONRF2Q1L5Z9 754 aa19.77■□□□□ 0.75
EXTL3-201ENST00000220562 CASC4Q6P4E1 433 aa19.77■□□□□ 0.75
EXTL3-201ENST00000220562 NLRC4Q9NPP4 1024 aa19.77■□□□□ 0.75
EXTL3-201ENST00000220562 TBC1D8O95759 1140 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms