RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.13■□□□□ 0.011e-6■■■□□ 14.7
TGFBR3-201ENST00000212355 DUOX2Q9NRD8 1548 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 ATP10BO94823 1461 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 KLHL30Q0D2K2 578 aa15.12■□□□□ 0.01
TGFBR3-201ENST00000212355 NSMFQ6X4W1 530 aa15.12■□□□□ 0.01
TGFBR3-201ENST00000212355 DPH5Q9H2P9 285 aa15.12■□□□□ 0.01
TGFBR3-201ENST00000212355 ARID4AP29374 1257 aaPredicted RBP15.12■□□□□ 0.01
TGFBR3-201ENST00000212355 MAGEA1P43355 309 aa15.12■□□□□ 0.01
TGFBR3-201ENST00000212355 ADCY7P51828 1080 aa15.12■□□□□ 0.01
TGFBR3-201ENST00000212355 KCNQ4P56696 695 aa15.12■□□□□ 0.01
TGFBR3-201ENST00000212355 ZNF365Q70YC5 407 aa15.12■□□□□ 0.01
TGFBR3-201ENST00000212355 MAGED2Q9UNF1 606 aaPredicted RBP15.12■□□□□ 0.01
TGFBR3-201ENST00000212355 PDE8AO60658 829 aa15.12■□□□□ 0.01
TGFBR3-201ENST00000212355 UBXN2AP68543 259 aa15.12■□□□□ 0.01
TGFBR3-201ENST00000212355 EXOC3O60645 756 aa15.12■□□□□ 0.01
TGFBR3-201ENST00000212355 CD2BP2O95400 341 aaKnown RBP15.12■□□□□ 0.01
TGFBR3-201ENST00000212355 DOK7Q18PE1 504 aa15.12■□□□□ 0.01
TGFBR3-201ENST00000212355 PHLDB2Q86SQ0 1253 aa15.12■□□□□ 0.01
TGFBR3-201ENST00000212355 USP28Q96RU2 1077 aa15.12■□□□□ 0.01
TGFBR3-201ENST00000212355 A2MP01023 1474 aa15.12■□□□□ 0.01
TGFBR3-201ENST00000212355 STRN3Q13033 797 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 LRRC43Q8N309 656 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 KIFAP3Q92845 792 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 PGBD1Q96JS3 809 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 YTHDC2Q9H6S0 1430 aaKnown RBP15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 ENC1O14682 589 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 NDUFA8P51970 172 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 LACTBP83111 547 aaPredicted RBP15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 ATP11AP98196 1134 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 TTLL7Q6ZT98 887 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 GAS2L3Q86XJ1 694 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 GRAMD1CQ8IYS0 662 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 ANKRD13CQ8N6S4 541 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 SLC1A4P43007 532 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 GCKRQ14397 625 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 SLC52A2Q9HAB3 445 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 GGA1Q9UJY5 639 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 PYCARDQ9ULZ3 195 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 ITSN2Q9NZM3 1697 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 INPP5BP32019 993 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 CD19P15391 556 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 PLCG2P16885 1265 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 MRPL12P52815 198 aaKnown RBP15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 LONRF2Q1L5Z9 754 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 KAZNQ674X7 775 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 TMEM87BQ96K49 555 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 VPS37BQ9H9H4 285 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 THRAP3Q9Y2W1 955 aaKnown RBP15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 PRAMEF22A3QJZ6 481 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 CACNB1Q02641 598 aaPredicted RBP15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 FAM102BQ5T8I3 360 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 CCDC170Q8IYT3 715 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 KBTBD3Q8NAB2 608 aa15.11■□□□□ 0.01
TGFBR3-201ENST00000212355 CIB2O75838 187 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 DDX12PQ92771 950 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 SLC39A2Q9NP94 309 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 TTF2Q9UNY4 1162 aaKnown RBP15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 NOP56O00567 594 aaKnown RBP15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 TRIM68Q6AZZ1 485 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 UNC5CLQ8IV45 518 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 ZNF496Q96IT1 587 aaPredicted RBP15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 UHRF1BP1Q6BDS2 1440 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 SYNJ2BP-COX16A0A087WUM0 186 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 ITIH3Q06033 890 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 ADCK5Q3MIX3 580 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 SFMBT2Q5VUG0 894 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 IFT20Q8IY31 132 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 IFIH1Q9BYX4 1025 aaKnown RBP15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 PICK1Q9NRD5 415 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 COX16Q9P0S2 106 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 KCNK3O14649 394 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 PPARAQ07869 468 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 DCUN1D2Q6PH85 259 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 PEX26Q7Z412 305 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 TTC6Q86TZ1 520 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 ASXL2Q76L83 1435 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 SMCO2A6NFE2 343 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 CETN3O15182 167 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 SAT1P21673 171 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 SNX16P57768 344 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 SLC9C1Q4G0N8 1177 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 RPUSD2Q8IZ73 545 aaKnown RBP15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 VPS52Q8N1B4 723 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 PTPN22Q9Y2R2 807 aa15.1■□□□□ 0.01
TGFBR3-201ENST00000212355 KRT15P19012 456 aa15.09■□□□□ 0.01
TGFBR3-201ENST00000212355 ADORA1P30542 326 aa15.09■□□□□ 0.01
TGFBR3-201ENST00000212355 IRX3P78415 501 aaPredicted RBP15.09■□□□□ 0.01
TGFBR3-201ENST00000212355 RASGRP4Q8TDF6 673 aa15.09■□□□□ 0.01
TGFBR3-201ENST00000212355 LRRC45Q96CN5 670 aa15.09■□□□□ 0.01
TGFBR3-201ENST00000212355 ST7Q9NRC1 585 aa15.09■□□□□ 0.01
TGFBR3-201ENST00000212355 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.09■□□□□ 0.01
TGFBR3-201ENST00000212355 KCNJ18B7U540 433 aa15.09■□□□□ 0.01
TGFBR3-201ENST00000212355 SMTNP53814 917 aa15.09■□□□□ 0.01
TGFBR3-201ENST00000212355 CLNS1AP54105 237 aaKnown RBP15.09■□□□□ 0.01
TGFBR3-201ENST00000212355 KCNJ12Q14500 433 aa15.09■□□□□ 0.01
TGFBR3-201ENST00000212355 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.09■□□□□ 0.01
TGFBR3-201ENST00000212355 SEPT10Q9P0V9 454 aa15.09■□□□□ 0.01
TGFBR3-201ENST00000212355 DDX41Q9UJV9 622 aaKnown RBP15.09■□□□□ 0.01
TGFBR3-201ENST00000212355 ZWINTO95229 277 aa15.09■□□□□ 0.01
TGFBR3-201ENST00000212355 SESN3P58005 492 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms