RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 GOLPH3LQ9H4A5 285 aa13.01□□□□□ -0.33
GPATCH1-201ENST00000170564 SAP30BPQ9UHR5 308 aaKnown RBP13.01□□□□□ -0.33
GPATCH1-201ENST00000170564 RCOR1Q9UKL0 485 aa13.01□□□□□ -0.33
GPATCH1-201ENST00000170564 ELF2Q15723 593 aa13□□□□□ -0.33
GPATCH1-201ENST00000170564 TMED8Q6PL24 325 aaPredicted RBP13□□□□□ -0.33
GPATCH1-201ENST00000170564 UBAC1Q9BSL1 405 aa13□□□□□ -0.33
GPATCH1-201ENST00000170564 ST7Q9NRC1 585 aa13□□□□□ -0.33
GPATCH1-201ENST00000170564 PLEKHA8P1O95397 391 aa13□□□□□ -0.33
GPATCH1-201ENST00000170564 ALDH1B1P30837 517 aa13□□□□□ -0.33
GPATCH1-201ENST00000170564 KRT40Q6A162 431 aa13□□□□□ -0.33
GPATCH1-201ENST00000170564 DPP8Q6V1X1 898 aaPredicted RBP13□□□□□ -0.33
GPATCH1-201ENST00000170564 C2CD5Q86YS7 1000 aa13□□□□□ -0.33
GPATCH1-201ENST00000170564 KRT222Q8N1A0 295 aa13□□□□□ -0.33
GPATCH1-201ENST00000170564 PLCD3Q8N3E9 789 aa13□□□□□ -0.33
GPATCH1-201ENST00000170564 CRACR2BQ8N4Y2 399 aaPredicted RBP13□□□□□ -0.33
GPATCH1-201ENST00000170564 ZNF622Q969S3 477 aaKnown RBP eCLIP13□□□□□ -0.334e-6■■□□□ 11.8
GPATCH1-201ENST00000170564 FAM163AQ96GL9 167 aaPredicted RBP13□□□□□ -0.33
GPATCH1-201ENST00000170564 SLC26A6Q9BXS9 759 aa13□□□□□ -0.33
GPATCH1-201ENST00000170564 DAGLAQ9Y4D2 1042 aa13□□□□□ -0.33
GPATCH1-201ENST00000170564 PCDHAC2Q9Y5I4 1007 aa13□□□□□ -0.33
GPATCH1-201ENST00000170564 FLT1P17948 1338 aa13□□□□□ -0.33
GPATCH1-201ENST00000170564 USP27XA6NNY8 438 aa13□□□□□ -0.33
GPATCH1-201ENST00000170564 CCDC144BQ3MJ40 725 aa13□□□□□ -0.33
GPATCH1-201ENST00000170564 PAXBP1Q9Y5B6 917 aa13□□□□□ -0.33
GPATCH1-201ENST00000170564 IARSP41252 1262 aaKnown RBP12.99□□□□□ -0.33
GPATCH1-201ENST00000170564 PKN1Q16512 942 aa12.99□□□□□ -0.33
GPATCH1-201ENST00000170564 RTN1Q16799 776 aa12.99□□□□□ -0.33
GPATCH1-201ENST00000170564 COA1Q9GZY4 146 aa12.99□□□□□ -0.33
GPATCH1-201ENST00000170564 STK36Q9NRP7 1315 aa12.99□□□□□ -0.33
GPATCH1-201ENST00000170564 hCG_1642624A0A1W2PR95 340 aa12.99□□□□□ -0.33
GPATCH1-201ENST00000170564 SKILP12757 684 aa12.99□□□□□ -0.33
GPATCH1-201ENST00000170564 VEGFAP15692 232 aaPredicted RBP12.99□□□□□ -0.33
GPATCH1-201ENST00000170564 NUP133Q8WUM0 1156 aa12.99□□□□□ -0.33
GPATCH1-201ENST00000170564 DBNDD1Q9H9R9 158 aa12.99□□□□□ -0.33
GPATCH1-201ENST00000170564 F8W031 263 aaPredicted RBP12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 USP5P45974 858 aa12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 SART3Q15020 963 aaKnown RBP12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 RASGRP2Q7LDG7 609 aa12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 ERCC4Q92889 916 aaPredicted RBP12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 DDX4Q9NQI0 724 aaKnown RBP12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 ZNF219Q9P2Y4 722 aaPredicted RBP12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 COL4A5P29400 1685 aa12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 CCDC66A2RUB6 948 aa12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 PCP11498 1178 aaKnown RBP12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 GSTO1P78417 241 aa12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 SNW1Q13573 536 aaKnown RBP12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 MYSM1Q5VVJ2 828 aa12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 KIF18AQ8NI77 898 aa12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 DDX41Q9UJV9 622 aaKnown RBP12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 SIPA1L1O43166 1804 aa12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 USP17L3A6NCW0 530 aa12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 USP17L4A6NCW7 530 aa12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 ADAMTS3O15072 1205 aa12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 HMGB2P26583 209 aaKnown RBP12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 IFIT1BQ5T764 474 aaKnown RBP12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 USP17L1Q7RTZ2 530 aa12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 ZBTB9Q96C00 473 aa12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 KCNJ14Q9UNX9 436 aa12.98□□□□□ -0.33
GPATCH1-201ENST00000170564 SLURP2P0DP57 97 aa12.97□□□□□ -0.33
GPATCH1-201ENST00000170564 SLC35G1Q2M3R5 365 aa12.97□□□□□ -0.33
GPATCH1-201ENST00000170564 TAF3Q5VWG9 929 aa12.97□□□□□ -0.33
GPATCH1-201ENST00000170564 LINC00301Q8NCQ3 95 aa12.97□□□□□ -0.33
GPATCH1-201ENST00000170564 ZC3H12CQ9C0D7 883 aaKnown RBP12.97□□□□□ -0.33
GPATCH1-201ENST00000170564 RTEL1Q9NZ71 1219 aa12.97□□□□□ -0.33
GPATCH1-201ENST00000170564 ERICH2A1L162 156 aa12.97□□□□□ -0.33
GPATCH1-201ENST00000170564 RCAN1P53805 252 aa12.97□□□□□ -0.33
GPATCH1-201ENST00000170564 GABPB1Q06547 395 aaPredicted RBP12.97□□□□□ -0.33
GPATCH1-201ENST00000170564 TMTC2Q8N394 836 aa12.97□□□□□ -0.33
GPATCH1-201ENST00000170564 CFAP45Q9UL16 551 aa12.97□□□□□ -0.33
GPATCH1-201ENST00000170564 CDKL5O76039 1030 aa12.97□□□□□ -0.33
GPATCH1-201ENST00000170564 BAG3O95817 575 aa12.97□□□□□ -0.33
GPATCH1-201ENST00000170564 RASA1P20936 1047 aa12.97□□□□□ -0.33
GPATCH1-201ENST00000170564 SCNN1DP51172 638 aa12.97□□□□□ -0.33
GPATCH1-201ENST00000170564 KMT5BQ4FZB7 885 aa12.97□□□□□ -0.33
GPATCH1-201ENST00000170564 STYK1Q6J9G0 422 aa12.97□□□□□ -0.33
GPATCH1-201ENST00000170564 ZNF397Q8NF99 534 aaPredicted RBP12.97□□□□□ -0.33
GPATCH1-201ENST00000170564 PCDHA7Q9UN72 937 aa12.97□□□□□ -0.33
GPATCH1-201ENST00000170564 WDHD1O75717 1129 aaPredicted RBP12.96□□□□□ -0.33
GPATCH1-201ENST00000170564 SLFN14P0C7P3 912 aa12.96□□□□□ -0.33
GPATCH1-201ENST00000170564 TFAP4Q01664 338 aa12.96□□□□□ -0.33
GPATCH1-201ENST00000170564 PDE4CQ08493 712 aa12.96□□□□□ -0.33
GPATCH1-201ENST00000170564 SSRP1Q08945 709 aaKnown RBP12.96□□□□□ -0.33
GPATCH1-201ENST00000170564 ZRSR1Q15695 479 aaKnown RBP12.96□□□□□ -0.33
GPATCH1-201ENST00000170564 TEX11Q8IYF3 940 aa12.96□□□□□ -0.33
GPATCH1-201ENST00000170564 SRBD1Q8N5C6 995 aaKnown RBP12.96□□□□□ -0.33
GPATCH1-201ENST00000170564 OXER1Q8TDS5 423 aa12.96□□□□□ -0.33
GPATCH1-201ENST00000170564 TBC1D22AQ8WUA7 517 aa12.96□□□□□ -0.33
GPATCH1-201ENST00000170564 MAP3K14Q99558 947 aa12.96□□□□□ -0.33
GPATCH1-201ENST00000170564 H0YIN7 160 aa12.96□□□□□ -0.33
GPATCH1-201ENST00000170564 POLR3GO15318 223 aaPredicted RBP12.96□□□□□ -0.33
GPATCH1-201ENST00000170564 IQCA1Q86XH1 822 aa12.96□□□□□ -0.33
GPATCH1-201ENST00000170564 ENGASEQ8NFI3 743 aa12.96□□□□□ -0.33
GPATCH1-201ENST00000170564 CHMP4CQ96CF2 233 aa12.96□□□□□ -0.33
GPATCH1-201ENST00000170564 C10orf71Q711Q0 1435 aa12.96□□□□□ -0.34
GPATCH1-201ENST00000170564 BTBD18B2RXH4 712 aa12.96□□□□□ -0.34
GPATCH1-201ENST00000170564 KCNA3P22001 575 aa12.96□□□□□ -0.34
GPATCH1-201ENST00000170564 TOB1P50616 345 aaPredicted RBP12.96□□□□□ -0.34
GPATCH1-201ENST00000170564 NPY5RQ15761 445 aa12.96□□□□□ -0.34
GPATCH1-201ENST00000170564 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.96□□□□□ -0.34
GPATCH1-201ENST00000170564 DDX19AQ9NUU7 478 aaKnown RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms