RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 POLD4Q9HCU8 107 aa22.7■■□□□ 1.22
PPP1R3F-201ENST00000055335 TBC1D2BQ9UPU7 963 aa22.7■■□□□ 1.22
PPP1R3F-201ENST00000055335 MRC1P22897 1456 aa22.7■■□□□ 1.22
PPP1R3F-201ENST00000055335 ERICH2A1L162 156 aa22.69■■□□□ 1.22
PPP1R3F-201ENST00000055335 ERCC5P28715 1186 aaPredicted RBP22.69■■□□□ 1.22
PPP1R3F-201ENST00000055335 CCT5P48643 541 aa22.69■■□□□ 1.22
PPP1R3F-201ENST00000055335 KANK3Q6NY19 840 aa22.69■■□□□ 1.22
PPP1R3F-201ENST00000055335 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.69■■□□□ 1.22
PPP1R3F-201ENST00000055335 MMS19Q96T76 1030 aa22.69■■□□□ 1.22
PPP1R3F-201ENST00000055335 EHD4Q9H223 541 aa22.69■■□□□ 1.22
PPP1R3F-201ENST00000055335 PRKAB2O43741 272 aa22.69■■□□□ 1.22
PPP1R3F-201ENST00000055335 KRT31Q15323 416 aa22.69■■□□□ 1.22
PPP1R3F-201ENST00000055335 WHAMMP3Q1A5X7 153 aa22.69■■□□□ 1.22
PPP1R3F-201ENST00000055335 DEF6Q9H4E7 631 aa22.69■■□□□ 1.22
PPP1R3F-201ENST00000055335 LTN1O94822 1766 aa22.69■■□□□ 1.22
PPP1R3F-201ENST00000055335 FAM237AA0A1B0GTK4 181 aa22.69■■□□□ 1.22
PPP1R3F-201ENST00000055335 CCDC122Q5T0U0 273 aa22.69■■□□□ 1.22
PPP1R3F-201ENST00000055335 KRT28Q7Z3Y7 464 aa22.69■■□□□ 1.22
PPP1R3F-201ENST00000055335 KIAA1328Q86T90 577 aa22.69■■□□□ 1.22
PPP1R3F-201ENST00000055335 WASF1Q92558 559 aa22.69■■□□□ 1.22
PPP1R3F-201ENST00000055335 PAGE5Q96GU1 130 aa22.69■■□□□ 1.22
PPP1R3F-201ENST00000055335 TMEM87BQ96K49 555 aa22.69■■□□□ 1.22
PPP1R3F-201ENST00000055335 ABHD10Q9NUJ1 306 aa22.69■■□□□ 1.22
PPP1R3F-201ENST00000055335 KDM6AO15550 1401 aaPredicted RBP22.68■■□□□ 1.22
PPP1R3F-201ENST00000055335 ADD2P35612 726 aa22.68■■□□□ 1.22
PPP1R3F-201ENST00000055335 DPYDQ12882 1025 aa22.68■■□□□ 1.22
PPP1R3F-201ENST00000055335 TMTC1Q8IUR5 882 aa22.68■■□□□ 1.22
PPP1R3F-201ENST00000055335 CTAGE1Q96RT6 745 aa22.68■■□□□ 1.22
PPP1R3F-201ENST00000055335 PSMB7Q99436 277 aa22.68■■□□□ 1.22
PPP1R3F-201ENST00000055335 JADE2Q9NQC1 790 aa22.68■■□□□ 1.22
PPP1R3F-201ENST00000055335 MKRN1Q9UHC7 482 aaKnown RBP22.68■■□□□ 1.22
PPP1R3F-201ENST00000055335 TRIM75PA6NK02 468 aa22.68■■□□□ 1.22
PPP1R3F-201ENST00000055335 GGCXP38435 758 aa22.68■■□□□ 1.22
PPP1R3F-201ENST00000055335 STIM1Q13586 685 aa22.68■■□□□ 1.22
PPP1R3F-201ENST00000055335 WTAPQ15007 396 aa22.68■■□□□ 1.22
PPP1R3F-201ENST00000055335 CYP26C1Q6V0L0 522 aa22.68■■□□□ 1.22
PPP1R3F-201ENST00000055335 MFSD6Q6ZSS7 791 aa22.68■■□□□ 1.22
PPP1R3F-201ENST00000055335 RASSF8Q8NHQ8 419 aa22.68■■□□□ 1.22
PPP1R3F-201ENST00000055335 PCMTD1Q96MG8 357 aaPredicted RBP22.68■■□□□ 1.22
PPP1R3F-201ENST00000055335 MINDY4BA8MYZ0 360 aa22.67■■□□□ 1.22
PPP1R3F-201ENST00000055335 MBD4O95243 580 aa22.67■■□□□ 1.22
PPP1R3F-201ENST00000055335 FMNL1O95466 1100 aaPredicted RBP22.67■■□□□ 1.22
PPP1R3F-201ENST00000055335 TSR1Q2NL82 804 aaKnown RBP22.67■■□□□ 1.22
PPP1R3F-201ENST00000055335 PPM1EQ8WY54 764 aa22.67■■□□□ 1.22
PPP1R3F-201ENST00000055335 DCAF5Q96JK2 942 aa22.67■■□□□ 1.22
PPP1R3F-201ENST00000055335 GNL3LQ9NVN8 582 aaKnown RBP22.67■■□□□ 1.22
PPP1R3F-201ENST00000055335 ATP1A1P05023 1023 aaKnown RBP22.67■■□□□ 1.22
PPP1R3F-201ENST00000055335 APTXQ7Z2E3 356 aaKnown RBP22.67■■□□□ 1.22
PPP1R3F-201ENST00000055335 ANKRD20A12PQ8NF67 263 aa22.67■■□□□ 1.22
PPP1R3F-201ENST00000055335 SRPRBQ9Y5M8 271 aaKnown RBP22.67■■□□□ 1.22
PPP1R3F-201ENST00000055335 UBR1Q8IWV7 1749 aa22.67■■□□□ 1.22
PPP1R3F-201ENST00000055335 MACROD2A1Z1Q3 448 aa22.67■■□□□ 1.22
PPP1R3F-201ENST00000055335 ZNF185O15231 689 aa22.67■■□□□ 1.22
PPP1R3F-201ENST00000055335 MAGEB6Q8N7X4 407 aa22.67■■□□□ 1.22
PPP1R3F-201ENST00000055335 TRIML1Q8N9V2 468 aa22.67■■□□□ 1.22
PPP1R3F-201ENST00000055335 IQUBQ8NA54 791 aa22.67■■□□□ 1.22
PPP1R3F-201ENST00000055335 MIGA1Q8NAN2 632 aa22.67■■□□□ 1.22
PPP1R3F-201ENST00000055335 CEP131Q9UPN4 1083 aa22.67■■□□□ 1.22
PPP1R3F-201ENST00000055335 PHKA1P46020 1223 aa22.66■■□□□ 1.22
PPP1R3F-201ENST00000055335 EPN1Q9Y6I3 576 aaPredicted RBP22.66■■□□□ 1.22
PPP1R3F-201ENST00000055335 PDE6AP16499 860 aa22.66■■□□□ 1.22
PPP1R3F-201ENST00000055335 EARS2Q5JPH6 523 aaKnown RBP22.66■■□□□ 1.22
PPP1R3F-201ENST00000055335 MED4Q9NPJ6 270 aa22.66■■□□□ 1.22
PPP1R3F-201ENST00000055335 ARHGAP25P42331 645 aa22.65■■□□□ 1.22
PPP1R3F-201ENST00000055335 LOC102724159A0A0B4J2E5 919 aa22.65■■□□□ 1.22
PPP1R3F-201ENST00000055335 SYF2O95926 243 aaKnown RBP22.65■■□□□ 1.22
PPP1R3F-201ENST00000055335 PWP2Q15269 919 aaKnown RBP22.65■■□□□ 1.22
PPP1R3F-201ENST00000055335 PLIN2Q99541 437 aa22.65■■□□□ 1.22
PPP1R3F-201ENST00000055335 NT5DC1Q5TFE4 455 aa22.64■■□□□ 1.22
PPP1R3F-201ENST00000055335 SAR1BQ9Y6B6 198 aa22.64■■□□□ 1.22
PPP1R3F-201ENST00000055335 PPFIA4O75335 1185 aa22.64■■□□□ 1.22
PPP1R3F-201ENST00000055335 IFNAR1P17181 557 aa22.64■■□□□ 1.22
PPP1R3F-201ENST00000055335 IBSPP21815 317 aaPredicted RBP22.64■■□□□ 1.22
PPP1R3F-201ENST00000055335 CORO7P57737 925 aa22.64■■□□□ 1.22
PPP1R3F-201ENST00000055335 IFNL3Q8IZI9 196 aa22.64■■□□□ 1.22
PPP1R3F-201ENST00000055335 SAMM50Q9Y512 469 aa22.64■■□□□ 1.22
PPP1R3F-201ENST00000055335 CIAO1O76071 339 aa22.64■■□□□ 1.21
PPP1R3F-201ENST00000055335 BAZ2BQ9UIF8 2168 aaKnown RBP22.64■■□□□ 1.21
PPP1R3F-201ENST00000055335 WNT7AO00755 349 aa22.63■■□□□ 1.21
PPP1R3F-201ENST00000055335 COPB1P53618 953 aaKnown RBP22.63■■□□□ 1.21
PPP1R3F-201ENST00000055335 IQSEC3Q9UPP2 1182 aaPredicted RBP22.63■■□□□ 1.21
PPP1R3F-201ENST00000055335 PPP1R3GB7ZBB8 358 aa22.63■■□□□ 1.21
PPP1R3F-201ENST00000055335 NDUFA10O95299 355 aa22.63■■□□□ 1.21
PPP1R3F-201ENST00000055335 MYBL2P10244 700 aa22.63■■□□□ 1.21
PPP1R3F-201ENST00000055335 C2orf54Q08AI8 447 aa22.63■■□□□ 1.21
PPP1R3F-201ENST00000055335 CUL4BQ13620 913 aa22.63■■□□□ 1.21
PPP1R3F-201ENST00000055335 MAP9Q49MG5 647 aa22.63■■□□□ 1.21
PPP1R3F-201ENST00000055335 UBAC1Q9BSL1 405 aa22.63■■□□□ 1.21
PPP1R3F-201ENST00000055335 TRIM49BA6NDI0 452 aa22.63■■□□□ 1.21
PPP1R3F-201ENST00000055335 STRN4Q9NRL3 753 aa22.63■■□□□ 1.21
PPP1R3F-201ENST00000055335 GOLGA6CA6NDK9 693 aa22.62■■□□□ 1.21
PPP1R3F-201ENST00000055335 KCNJ18B7U540 433 aa22.62■■□□□ 1.21
PPP1R3F-201ENST00000055335 DEXIO95424 95 aa22.62■■□□□ 1.21
PPP1R3F-201ENST00000055335 GOLGA6DP0CG33 693 aa22.62■■□□□ 1.21
PPP1R3F-201ENST00000055335 DNA2P51530 1060 aa22.62■■□□□ 1.21
PPP1R3F-201ENST00000055335 KCNJ12Q14500 433 aa22.62■■□□□ 1.21
PPP1R3F-201ENST00000055335 PAXIP1Q6ZW49 1069 aaPredicted RBP22.62■■□□□ 1.21
PPP1R3F-201ENST00000055335 FAM76AQ8TAV0 307 aa22.62■■□□□ 1.21
PPP1R3F-201ENST00000055335 NELFBQ8WX92 580 aa22.62■■□□□ 1.21
PPP1R3F-201ENST00000055335 GOLGA6AQ9NYA3 693 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms