RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 DPF3Q92784 378 aa19.25■□□□□ 0.67
ERCC1-201ENST00000013807 CRNKL1Q9BZJ0 848 aaKnown RBP19.25■□□□□ 0.67
ERCC1-201ENST00000013807 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.25■□□□□ 0.67
ERCC1-201ENST00000013807 ZNF532Q9HCE3 1301 aa19.25■□□□□ 0.67
ERCC1-201ENST00000013807 USP17L15C9J2P7 530 aa19.24■□□□□ 0.67
ERCC1-201ENST00000013807 USP17L13C9JLJ4 530 aa19.24■□□□□ 0.67
ERCC1-201ENST00000013807 USP17L11C9JVI0 530 aa19.24■□□□□ 0.67
ERCC1-201ENST00000013807 USP17L18D6R9N7 530 aa19.24■□□□□ 0.67
ERCC1-201ENST00000013807 USP17L22D6RA61 530 aa19.24■□□□□ 0.67
ERCC1-201ENST00000013807 USP17L17D6RBQ6 530 aa19.24■□□□□ 0.67
ERCC1-201ENST00000013807 USP17L19D6RCP7 530 aa19.24■□□□□ 0.67
ERCC1-201ENST00000013807 USP17L20D6RJB6 530 aa19.24■□□□□ 0.67
ERCC1-201ENST00000013807 TFRCP02786 760 aaKnown RBP19.24■□□□□ 0.67
ERCC1-201ENST00000013807 USP17L24Q0WX57 530 aa19.24■□□□□ 0.67
ERCC1-201ENST00000013807 CATSPERGQ6ZRH7 1159 aa19.24■□□□□ 0.67
ERCC1-201ENST00000013807 TRMT44Q8IYL2 757 aaKnown RBP19.24■□□□□ 0.67
ERCC1-201ENST00000013807 NUDT12Q9BQG2 462 aa19.24■□□□□ 0.67
ERCC1-201ENST00000013807 RABGAP1Q9Y3P9 1069 aa19.24■□□□□ 0.67
ERCC1-201ENST00000013807 GOLIM4O00461 696 aa19.23■□□□□ 0.67
ERCC1-201ENST00000013807 GUCY1A2P33402 732 aa19.23■□□□□ 0.67
ERCC1-201ENST00000013807 TRIB2Q92519 343 aa19.23■□□□□ 0.67
ERCC1-201ENST00000013807 PRO3102Q9H379 93 aa19.23■□□□□ 0.67
ERCC1-201ENST00000013807 HMX1Q9NP08 348 aaPredicted RBP19.23■□□□□ 0.67
ERCC1-201ENST00000013807 CABP5Q9NP86 173 aa19.23■□□□□ 0.67
ERCC1-201ENST00000013807 DCP1AQ9NPI6 582 aaPredicted RBP19.23■□□□□ 0.67
ERCC1-201ENST00000013807 NR2E3Q9Y5X4 410 aa19.23■□□□□ 0.67
ERCC1-201ENST00000013807 POLR3DP05423 398 aaPredicted RBP19.22■□□□□ 0.67
ERCC1-201ENST00000013807 MORN1Q5T089 497 aa19.22■□□□□ 0.67
ERCC1-201ENST00000013807 HAUS7Q99871 368 aa19.22■□□□□ 0.67
ERCC1-201ENST00000013807 PARP14Q460N5 1801 aa19.22■□□□□ 0.67
ERCC1-201ENST00000013807 SZT2Q5T011 3432 aa19.22■□□□□ 0.67
ERCC1-201ENST00000013807 PEX10O60683 326 aa19.21■□□□□ 0.67
ERCC1-201ENST00000013807 CNMDO75829 334 aa19.21■□□□□ 0.67
ERCC1-201ENST00000013807 VCAM1P19320 739 aa19.21■□□□□ 0.67
ERCC1-201ENST00000013807 ADD2P35612 726 aa19.21■□□□□ 0.67
ERCC1-201ENST00000013807 RAB3GAP1Q15042 981 aa19.21■□□□□ 0.67
ERCC1-201ENST00000013807 GPR142Q7Z601 462 aa19.21■□□□□ 0.67
ERCC1-201ENST00000013807 ACER1Q8TDN7 264 aa19.21■□□□□ 0.67
ERCC1-201ENST00000013807 PORCNQ9H237 461 aa19.21■□□□□ 0.67
ERCC1-201ENST00000013807 ATP8A2Q9NTI2 1148 aa19.21■□□□□ 0.67
ERCC1-201ENST00000013807 PAG1Q9NWQ8 432 aa19.21■□□□□ 0.67
ERCC1-201ENST00000013807 MCM9Q9NXL9 1143 aa19.21■□□□□ 0.67
ERCC1-201ENST00000013807 ZNFX1Q9P2E3 1918 aaKnown RBP19.2■□□□□ 0.66
ERCC1-201ENST00000013807 APBB1O00213 710 aa19.2■□□□□ 0.66
ERCC1-201ENST00000013807 CYP2B6P20813 491 aa19.2■□□□□ 0.66
ERCC1-201ENST00000013807 MNX1P50219 401 aaPredicted RBP19.2■□□□□ 0.66
ERCC1-201ENST00000013807 TRIM32Q13049 653 aa19.2■□□□□ 0.66
ERCC1-201ENST00000013807 UBE3CQ15386 1083 aa19.2■□□□□ 0.66
ERCC1-201ENST00000013807 LCORLQ8N3X6 602 aa19.2■□□□□ 0.66
ERCC1-201ENST00000013807 EDC3Q96F86 508 aaKnown RBP19.2■□□□□ 0.66
ERCC1-201ENST00000013807 DNAJC2Q99543 621 aaKnown RBP19.2■□□□□ 0.66
ERCC1-201ENST00000013807 FEZ1Q99689 392 aa19.2■□□□□ 0.66
ERCC1-201ENST00000013807 SWAP70Q9UH65 585 aa19.2■□□□□ 0.66
ERCC1-201ENST00000013807 OGDHLQ9ULD0 1010 aa19.2■□□□□ 0.66
ERCC1-201ENST00000013807 FRMPD3Q5JV73 1810 aa19.2■□□□□ 0.66
ERCC1-201ENST00000013807 CCNA1P78396 465 aa19.19■□□□□ 0.66
ERCC1-201ENST00000013807 NECAB2Q7Z6G3 386 aa19.19■□□□□ 0.66
ERCC1-201ENST00000013807 PLEKHH3Q7Z736 793 aa19.19■□□□□ 0.66
ERCC1-201ENST00000013807 SDR42E1Q8WUS8 393 aa19.19■□□□□ 0.66
ERCC1-201ENST00000013807 PAWRQ96IZ0 340 aaKnown RBP19.19■□□□□ 0.66
ERCC1-201ENST00000013807 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.19■□□□□ 0.66
ERCC1-201ENST00000013807 BOLA2Q9H3K6 86 aa19.19■□□□□ 0.66
ERCC1-201ENST00000013807 A0A0G2JMZ2 1700 aa19.19■□□□□ 0.66
ERCC1-201ENST00000013807 A0A1W2PRG0 241 aa19.18■□□□□ 0.66
ERCC1-201ENST00000013807 RGS2P41220 211 aa19.18■□□□□ 0.66
ERCC1-201ENST00000013807 SEPT2Q15019 361 aa19.18■□□□□ 0.66
ERCC1-201ENST00000013807 LRRCC1Q9C099 1032 aa19.18■□□□□ 0.66
ERCC1-201ENST00000013807 ZNF236Q9UL36 1845 aa19.18■□□□□ 0.66
ERCC1-201ENST00000013807 HOXC6P09630 235 aa19.17■□□□□ 0.66
ERCC1-201ENST00000013807 EVX2Q03828 476 aa19.17■□□□□ 0.66
ERCC1-201ENST00000013807 ZYXQ15942 572 aaKnown RBP19.17■□□□□ 0.66
ERCC1-201ENST00000013807 C20orf194Q5TEA3 1177 aa19.17■□□□□ 0.66
ERCC1-201ENST00000013807 CHRDL2Q6WN34 429 aa19.17■□□□□ 0.66
ERCC1-201ENST00000013807 TMEM179Q6ZVK1 233 aa19.17■□□□□ 0.66
ERCC1-201ENST00000013807 PAGR1Q9BTK6 254 aa19.17■□□□□ 0.66
ERCC1-201ENST00000013807 RBM27Q9P2N5 1060 aaKnown RBP19.17■□□□□ 0.66
ERCC1-201ENST00000013807 A0A1W2PPC1 479 aa19.16■□□□□ 0.66
ERCC1-201ENST00000013807 SLC15A5A6NIM6 579 aa19.16■□□□□ 0.66
ERCC1-201ENST00000013807 SPDYE16A6NNV3 312 aaPredicted RBP19.16■□□□□ 0.66
ERCC1-201ENST00000013807 EVI5O60447 810 aa19.16■□□□□ 0.66
ERCC1-201ENST00000013807 GLRX3O76003 335 aaKnown RBP19.16■□□□□ 0.66
ERCC1-201ENST00000013807 IGHA2P01877 340 aa19.16■□□□□ 0.66
ERCC1-201ENST00000013807 PRKAR2AP13861 404 aaKnown RBP19.16■□□□□ 0.66
ERCC1-201ENST00000013807 CACNB2Q08289 660 aaPredicted RBP19.16■□□□□ 0.66
ERCC1-201ENST00000013807 MAP2K5Q13163 448 aa19.16■□□□□ 0.66
ERCC1-201ENST00000013807 COG2Q14746 738 aa19.16■□□□□ 0.66
ERCC1-201ENST00000013807 C12orf60Q5U649 245 aa19.16■□□□□ 0.66
ERCC1-201ENST00000013807 SIAH1Q8IUQ4 282 aa19.16■□□□□ 0.66
ERCC1-201ENST00000013807 CCAR1Q8IX12 1150 aaKnown RBP19.16■□□□□ 0.66
ERCC1-201ENST00000013807 CCDC17Q96LX7 622 aa19.16■□□□□ 0.66
ERCC1-201ENST00000013807 APBA2Q99767 749 aa19.16■□□□□ 0.66
ERCC1-201ENST00000013807 NBPF3Q9H094 633 aa19.16■□□□□ 0.66
ERCC1-201ENST00000013807 RPAP3Q9H6T3 665 aaPredicted RBP19.16■□□□□ 0.66
ERCC1-201ENST00000013807 ARMT1Q9H993 441 aa19.16■□□□□ 0.66
ERCC1-201ENST00000013807 HOXC10Q9NYD6 342 aa19.16■□□□□ 0.66
ERCC1-201ENST00000013807 BTBD7Q9P203 1132 aa19.16■□□□□ 0.66
ERCC1-201ENST00000013807 GREB1LQ9C091 1923 aaPredicted RBP19.15■□□□□ 0.66
ERCC1-201ENST00000013807 MBD4O95243 580 aa19.15■□□□□ 0.66
ERCC1-201ENST00000013807 ZKSCAN1P17029 563 aaPredicted RBP19.15■□□□□ 0.66
ERCC1-201ENST00000013807 PTPREP23469 700 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms