RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Stag1Q9D3E6 1258 aa13.67□□□□□ -0.22
Herc4-208ENSMUST00000219577 AtrnQ9WU60 1428 aa13.67□□□□□ -0.22
Herc4-208ENSMUST00000219577 Ginm1Q91WR6 327 aa13.67□□□□□ -0.22
Herc4-208ENSMUST00000219577 Igsf9bE9PZ19 1328 aa13.67□□□□□ -0.22
Herc4-208ENSMUST00000219577 Tbc1d2B1AVH7 922 aa13.67□□□□□ -0.22
Herc4-208ENSMUST00000219577 Slc39a2G3X943 309 aa13.67□□□□□ -0.22
Herc4-208ENSMUST00000219577 Ctr9Q62018 1173 aaKnown RBP13.67□□□□□ -0.22
Herc4-208ENSMUST00000219577 LpxnQ99N69 386 aa13.67□□□□□ -0.22
Herc4-208ENSMUST00000219577 PdclQ9DBX2 301 aa13.67□□□□□ -0.22
Herc4-208ENSMUST00000219577 ChmQ9QXG2 665 aa13.67□□□□□ -0.22
Herc4-208ENSMUST00000219577 Vstm4T1NXB5 319 aa13.67□□□□□ -0.22
Herc4-208ENSMUST00000219577 Gm13023A2A8N2 498 aa13.66□□□□□ -0.22
Herc4-208ENSMUST00000219577 Ncoa7Q6DFV7 943 aa13.66□□□□□ -0.22
Herc4-208ENSMUST00000219577 Clec16aQ80U30 1036 aa13.66□□□□□ -0.22
Herc4-208ENSMUST00000219577 Taf6lQ8R2K4 616 aa13.66□□□□□ -0.22
Herc4-208ENSMUST00000219577 Cd274Q9EP73 290 aa13.66□□□□□ -0.22
Herc4-208ENSMUST00000219577 Sall1Q9ER74 1322 aa13.66□□□□□ -0.22
Herc4-208ENSMUST00000219577 Kcnh4A2A5F7 1018 aa13.66□□□□□ -0.22
Herc4-208ENSMUST00000219577 Ube4aE9Q735 1028 aa13.66□□□□□ -0.22
Herc4-208ENSMUST00000219577 Snd1Q78PY7 910 aaKnown RBP13.66□□□□□ -0.22
Herc4-208ENSMUST00000219577 Tas2r124Q7M718 309 aa13.66□□□□□ -0.22
Herc4-208ENSMUST00000219577 Rab11fip4Q8BQP8 635 aa13.66□□□□□ -0.22
Herc4-208ENSMUST00000219577 NelfbQ8C4Y3 580 aa13.66□□□□□ -0.22
Herc4-208ENSMUST00000219577 Lgr5Q9Z1P4 907 aa13.66□□□□□ -0.22
Herc4-208ENSMUST00000219577 Rgs12Q8CGE9 1381 aa13.66□□□□□ -0.22
Herc4-208ENSMUST00000219577 Atp8b5A3FIN4 1183 aa13.66□□□□□ -0.22
Herc4-208ENSMUST00000219577 Copb2O55029 905 aa13.66□□□□□ -0.22
Herc4-208ENSMUST00000219577 Igbp1Q61249 340 aa13.66□□□□□ -0.22
Herc4-208ENSMUST00000219577 Fxr1Q61584 677 aaKnown RBP13.66□□□□□ -0.22
Herc4-208ENSMUST00000219577 Paf1Q8K2T8 535 aa13.66□□□□□ -0.22
Herc4-208ENSMUST00000219577 Hexim1Q8R409 356 aaKnown RBP13.66□□□□□ -0.22
Herc4-208ENSMUST00000219577 RabggtaQ9JHK4 567 aa13.66□□□□□ -0.22
Herc4-208ENSMUST00000219577 Cyp3a25O09158 503 aa13.65□□□□□ -0.22
Herc4-208ENSMUST00000219577 EmbP21995 330 aa13.65□□□□□ -0.22
Herc4-208ENSMUST00000219577 Sox5P35710 763 aa13.65□□□□□ -0.22
Herc4-208ENSMUST00000219577 Cxcl11Q9JHH5 100 aa13.65□□□□□ -0.22
Herc4-208ENSMUST00000219577 Btn2a2A4QPC6 514 aa13.65□□□□□ -0.22
Herc4-208ENSMUST00000219577 Dok7Q18PE0 504 aa13.65□□□□□ -0.22
Herc4-208ENSMUST00000219577 Gucy2cQ3UWA6 1072 aa13.65□□□□□ -0.22
Herc4-208ENSMUST00000219577 Cep112Q5PR68 954 aa13.65□□□□□ -0.22
Herc4-208ENSMUST00000219577 Asic1Q6NXK8 526 aa13.65□□□□□ -0.22
Herc4-208ENSMUST00000219577 Slc4a8Q8JZR6 1089 aa13.65□□□□□ -0.22
Herc4-208ENSMUST00000219577 Egfl6Q9JJZ5 550 aa13.65□□□□□ -0.22
Herc4-208ENSMUST00000219577 ErmnQ5EBJ4 281 aa13.65□□□□□ -0.22
Herc4-208ENSMUST00000219577 March6Q6ZQ89 909 aa13.65□□□□□ -0.22
Herc4-208ENSMUST00000219577 Ttll4Q80UG8 1193 aa13.65□□□□□ -0.22
Herc4-208ENSMUST00000219577 Znf428Q8C1M2 176 aa13.65□□□□□ -0.22
Herc4-208ENSMUST00000219577 Ddx41Q91VN6 622 aaKnown RBP13.65□□□□□ -0.22
Herc4-208ENSMUST00000219577 Pex3Q9QXY9 372 aa13.65□□□□□ -0.22
Herc4-208ENSMUST00000219577 Atp1a4Q9WV27 1032 aa13.65□□□□□ -0.22
Herc4-208ENSMUST00000219577 Gm43738A0A0G2JEA5 862 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 ErmardE9Q048 622 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 MthfslL7N466 203 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Enc1O35709 589 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Lrrc6O88978 473 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Dnph1Q80VJ3 173 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Hps4Q99KG7 671 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 NenfQ9CQ45 171 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Uchl5Q9WUP7 329 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Gm5580A0A0N4SVP8 411 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Gucy1b3O54865 620 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Tom1O88746 492 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Nap1l1P28656 391 aaKnown RBP13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Cdh15P33146 784 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Jade2Q6ZQF7 829 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Nme8Q715T0 586 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Ccdc93Q7TQK5 629 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Cd209bQ8CJ91 325 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Brms1Q99N20 246 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Sgpp1Q9JI99 430 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Frmd7A2AD83 703 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Gm28042B7ZCM9 1014 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Trim30cD3YVI9 513 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Adssl1P28650 457 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Gpbp1Q6NXH3 473 aaKnown RBP13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Mettl5Q8K1A0 209 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Exoc1Q8R3S6 894 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Eif2ak3Q9Z2B5 1114 aa13.64□□□□□ -0.23
Herc4-208ENSMUST00000219577 Lcmt1A0A0U1RNF2 332 aa13.63□□□□□ -0.23
Herc4-208ENSMUST00000219577 Hdgfl1Q2VPR5 283 aa13.63□□□□□ -0.23
Herc4-208ENSMUST00000219577 VrtnQ3SYK4 740 aa13.63□□□□□ -0.23
Herc4-208ENSMUST00000219577 Armc2Q3URY6 854 aa13.63□□□□□ -0.23
Herc4-208ENSMUST00000219577 Carmil2Q3V3V9 1296 aa13.63□□□□□ -0.23
Herc4-208ENSMUST00000219577 Bbs9Q811G0 885 aa13.63□□□□□ -0.23
Herc4-208ENSMUST00000219577 Slc13a4Q8BZ82 625 aa13.63□□□□□ -0.23
Herc4-208ENSMUST00000219577 Q8CEZ4 452 aa13.63□□□□□ -0.23
Herc4-208ENSMUST00000219577 Slc51aQ8R000 340 aa13.63□□□□□ -0.23
Herc4-208ENSMUST00000219577 Fam114a1Q9D281 569 aa13.63□□□□□ -0.23
Herc4-208ENSMUST00000219577 Spocd1B1ASB6 936 aa13.63□□□□□ -0.23
Herc4-208ENSMUST00000219577 Ccdc121E9Q6D3 323 aa13.63□□□□□ -0.23
Herc4-208ENSMUST00000219577 Nfatc2ipO09130 412 aa13.63□□□□□ -0.23
Herc4-208ENSMUST00000219577 Tbc1d2bQ3U0J8 965 aa13.63□□□□□ -0.23
Herc4-208ENSMUST00000219577 RbsnQ80Y56 783 aa13.63□□□□□ -0.23
Herc4-208ENSMUST00000219577 Ttc14Q9CSP9 761 aa13.63□□□□□ -0.23
Herc4-208ENSMUST00000219577 IkQ9Z1M8 557 aaKnown RBP13.63□□□□□ -0.23
Herc4-208ENSMUST00000219577 Acad12D3Z7X0 555 aa13.63□□□□□ -0.23
Herc4-208ENSMUST00000219577 Nr5a1P33242 462 aa13.63□□□□□ -0.23
Herc4-208ENSMUST00000219577 Nf2P46662 596 aa13.63□□□□□ -0.23
Herc4-208ENSMUST00000219577 Erich4Q3UNU4 136 aa13.63□□□□□ -0.23
Herc4-208ENSMUST00000219577 Jakmip3Q5DTN8 844 aa13.63□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 44.2 ms