RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Usp38Q8BW70 1042 aa10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Znf330Q922H9 316 aa10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Armcx1Q9CX83 456 aa10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 GrapQ9CX99 217 aa10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Chmp4bQ9D8B3 224 aaKnown RBP10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Ftsj3Q9DBE9 838 aaKnown RBP10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Fkbp1bQ9Z2I2 108 aa10.46□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 A0A1W2P7S8 802 aa10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Mms22lB1AUR6 1238 aa10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Pde8bE9Q4S1 865 aa10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Speer4dL7N216 212 aa10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 DaxxO35613 739 aa10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 LtkP08923 888 aa10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 AcrP23578 436 aa10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Ccl5P30882 91 aa10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Defb25Q30KN8 71 aa10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Btg1-ps1Q3V0S2 161 aa10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Btg1-ps2Q3V0X0 161 aa10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Kif22Q3V300 660 aa10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Tbc1d9bQ5SVR0 1263 aa10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 AsnsQ61024 561 aa10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Cdc5lQ6A068 802 aaKnown RBP10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Dync1li2Q6PDL0 492 aaKnown RBP10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Tmco5bQ80X59 307 aa10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Tmem179Q8BHH9 233 aa10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 3830417A13RikQ8BQJ2 303 aa10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Dlk2Q8K1E3 382 aa10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Snapc2Q91XA5 359 aa10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Pidd1Q9ERV7 915 aa10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 GraspQ9JJA9 392 aa10.45□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 PfasQ5SUR0 1337 aa10.44□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Trim30dE9PWL0 497 aa10.44□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Gml2G5E8L7 176 aa10.44□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Slc27a3O88561 667 aa10.44□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Defa-rs2P17534 91 aa10.44□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Art2aP17981 287 aa10.44□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Hmx2P43687 273 aa10.44□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Eif5P59325 429 aaKnown RBP10.44□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Ppp1r21Q3TDD9 780 aa10.44□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Parp3Q3ULW8 533 aa10.44□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Tmem151bQ68FE7 561 aa10.44□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Cluap1Q8R3P7 413 aa10.44□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Gfra4Q9JJT2 260 aa10.44□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Gp6P0C191 313 aa10.43□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 ThbdP15306 577 aa10.43□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 FurinP23188 793 aa10.43□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Lpar1P61793 364 aa10.43□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Chl1P70232 1209 aa10.43□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Fam83hQ148V8 1209 aa10.43□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Fscn2Q32M02 492 aa10.43□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 4930567H17RikQ3V0K5 233 aa10.43□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Ece1Q4PZA2 769 aa10.43□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Adora1Q60612 326 aa10.43□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Tmc8Q7TN58 722 aa10.43□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Nutm1Q8BHP2 1126 aa10.43□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Aldh1l2Q8K009 923 aa10.43□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Hps4Q99KG7 671 aa10.43□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Sept14Q9DA97 430 aa10.43□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Chd5A2A8L1 1946 aa10.43□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Cep290Q6A078 2472 aa10.42□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 R3hdm1E9Q9Q2 1135 aaKnown RBP10.42□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Has3O08650 554 aa10.42□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 AoahO35298 574 aa10.42□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Slc27a5Q4LDG0 689 aa10.42□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Ccdc84Q4VA36 332 aaKnown RBP10.42□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Wwc1Q5SXA9 1104 aa10.42□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 SkilQ60665 675 aa10.42□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Dnai1Q8C0M8 701 aa10.42□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Noc3lQ8VI84 807 aaKnown RBP10.42□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Fsip1Q9D3V5 435 aa10.42□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Scube2Q9JJS0 997 aa10.42□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Sept3Q9Z1S5 350 aa10.42□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 PcntP48725 2898 aa10.42□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Myh4Q5SX39 1939 aa10.41□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Brd1E9PZ26 1189 aaKnown RBP10.41□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Adam7O35227 789 aa10.41□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Grem2O88273 168 aa10.41□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 AppP12023 770 aa10.41□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Rbm15bQ6PHZ5 887 aaKnown RBP10.41□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Ppp1r9bQ6R891 817 aaKnown RBP10.41□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Slc9c1Q6UJY2 1175 aa10.41□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 GlmnQ8BZM1 596 aa10.41□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 PaoxQ8C0L6 504 aa10.41□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Bud13Q8R149 637 aa10.41□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Yipf1Q91VU1 306 aa10.41□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Maged1Q9QYH6 775 aaKnown RBP10.41□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Myh15E9Q264 1925 aa10.41□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Zfp804bA0A0G2JGH6 1343 aa10.4□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 InsrrQ9WTL4 1300 aa10.4□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 1700003F12RikA2AKE5 210 aa10.4□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Cep126Q0VBV7 1103 aa10.4□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Ric3Q8BPM6 367 aa10.4□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 Ankrd54Q91WK7 299 aa10.4□□□□□ -0.74
Pdlim5-209ENSMUST00000196908 TrioQ0KL02 3102 aa10.4□□□□□ -0.75
Pdlim5-209ENSMUST00000196908 Cfap44E9Q5M6 1843 aa10.4□□□□□ -0.75
Pdlim5-209ENSMUST00000196908 Frmpd4A2AFR3 1320 aa10.39□□□□□ -0.75
Pdlim5-209ENSMUST00000196908 Fam205a1D3YZF6 1314 aa10.39□□□□□ -0.75
Pdlim5-209ENSMUST00000196908 Wfdc16A2A5H4 111 aa10.39□□□□□ -0.75
Pdlim5-209ENSMUST00000196908 Gm4340L7N2C4 268 aa10.39□□□□□ -0.75
Pdlim5-209ENSMUST00000196908 Map7O88735 730 aa10.39□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms