RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Pald1P70261 859 aa12.16□□□□□ -0.46
Msh3-202ENSMUST00000185852 Qrich1Q3UA37 777 aa12.16□□□□□ -0.46
Msh3-202ENSMUST00000185852 Rgl1Q60695 768 aa12.16□□□□□ -0.46
Msh3-202ENSMUST00000185852 Kif1bpQ6ZPU9 617 aa12.16□□□□□ -0.46
Msh3-202ENSMUST00000185852 Defb15Q8R2I5 79 aa12.16□□□□□ -0.46
Msh3-202ENSMUST00000185852 Ndufv1Q91YT0 464 aa12.16□□□□□ -0.46
Msh3-202ENSMUST00000185852 Col14a1Q80X19 1797 aa12.16□□□□□ -0.46
Msh3-202ENSMUST00000185852 Sept2P42208 361 aaKnown RBP12.16□□□□□ -0.46
Msh3-202ENSMUST00000185852 Znhit6Q3UFB2 460 aaKnown RBP12.16□□□□□ -0.46
Msh3-202ENSMUST00000185852 Mtss1lQ6P9S0 715 aa12.16□□□□□ -0.46
Msh3-202ENSMUST00000185852 Pdzph1Q8BGR1 1238 aa12.16□□□□□ -0.46
Msh3-202ENSMUST00000185852 Antxr1Q9CZ52 562 aa12.16□□□□□ -0.46
Msh3-202ENSMUST00000185852 Lman1Q9D0F3 517 aa12.16□□□□□ -0.46
Msh3-202ENSMUST00000185852 Kcnq5Q9JK45 933 aa12.16□□□□□ -0.46
Msh3-202ENSMUST00000185852 1700006A11RikB9EHI3 544 aa12.16□□□□□ -0.46
Msh3-202ENSMUST00000185852 CnstQ8CBC4 711 aa12.16□□□□□ -0.46
Msh3-202ENSMUST00000185852 SnrkQ8VDU5 748 aa12.16□□□□□ -0.46
Msh3-202ENSMUST00000185852 LpxnQ99N69 386 aa12.16□□□□□ -0.46
Msh3-202ENSMUST00000185852 Zfp51Q3U4L8 781 aa12.15□□□□□ -0.46
Msh3-202ENSMUST00000185852 CrkQ64010 304 aa12.15□□□□□ -0.46
Msh3-202ENSMUST00000185852 Krt40Q6IFX3 439 aa12.15□□□□□ -0.46
Msh3-202ENSMUST00000185852 Slc44a1Q6X893 653 aa12.15□□□□□ -0.46
Msh3-202ENSMUST00000185852 Hps6Q8BLY7 805 aa12.15□□□□□ -0.46
Msh3-202ENSMUST00000185852 Zmynd15Q8C0R7 736 aa12.15□□□□□ -0.46
Msh3-202ENSMUST00000185852 Sycp2lA0A0M3U1B0 842 aa12.15□□□□□ -0.46
Msh3-202ENSMUST00000185852 Phldb3E9QAF4 648 aa12.15□□□□□ -0.46
Msh3-202ENSMUST00000185852 Flot1O08917 428 aa12.15□□□□□ -0.46
Msh3-202ENSMUST00000185852 MyocO70624 490 aa12.15□□□□□ -0.46
Msh3-202ENSMUST00000185852 Cul9Q80TT8 1865 aa12.15□□□□□ -0.46
Msh3-202ENSMUST00000185852 Krt79Q8VED5 531 aa12.15□□□□□ -0.46
Msh3-202ENSMUST00000185852 AdnpQ9Z103 1108 aaKnown RBP12.15□□□□□ -0.46
Msh3-202ENSMUST00000185852 Gm11549A0A286YD83 63 aa12.15□□□□□ -0.47
Msh3-202ENSMUST00000185852 Hmgb2P30681 210 aaKnown RBP12.15□□□□□ -0.47
Msh3-202ENSMUST00000185852 Eef2P58252 858 aaKnown RBP12.15□□□□□ -0.47
Msh3-202ENSMUST00000185852 Psen2Q61144 448 aa12.15□□□□□ -0.47
Msh3-202ENSMUST00000185852 Cep135Q6P5D4 1140 aa12.15□□□□□ -0.47
Msh3-202ENSMUST00000185852 Csrnp2Q8BGQ2 534 aa12.15□□□□□ -0.47
Msh3-202ENSMUST00000185852 SowahdQ8BY98 327 aa12.15□□□□□ -0.47
Msh3-202ENSMUST00000185852 Pex3Q9QXY9 372 aa12.15□□□□□ -0.47
Msh3-202ENSMUST00000185852 Aox4Q3TYQ9 1336 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Zscan25B2RX31 543 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Foxp1P58462 705 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Ccdc102aQ3TMW1 549 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 PrimpolQ6P1E7 537 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Zswim4Q8C7B8 1101 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Cyp3a59D3Z2W7 503 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Stim2P83093 746 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Ift88Q61371 824 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Ube2oQ6ZPJ3 1288 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Lmbrd1Q8K0B2 537 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Fam13bQ8K2H3 851 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Sf3b3Q921M3 1217 aaKnown RBP12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Nrbp1Q99J45 535 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Tmem191cQ9JJB1 302 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Tmem47Q9JJG6 181 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Nfe2l3Q9WTM4 660 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Sik3Q6P4S6 1311 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Itsn1Q9Z0R4 1714 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Diaph1O08808 1255 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Tdo2P48776 406 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Pcif1P59114 706 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Vps18Q8R307 973 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 4921524L21RikQ9D5T2 438 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Nr2e3Q9QXZ7 395 aa12.14□□□□□ -0.47
Msh3-202ENSMUST00000185852 Gng11P61953 73 aa12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 Dcaf17Q3TUL7 519 aa12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 Tsg101Q61187 391 aa12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 Herc4Q6PAV2 1057 aa12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 Fam102bQ8BQS4 339 aa12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 Prss51A0A286YDY8 319 aa12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 Slc39a2G3X943 309 aa12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 Lrrc32G3XA59 663 aa12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 HmmrQ00547 794 aaKnown RBP12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 Ttbk2Q3UVR3 1243 aa12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 Meis1Q60954 390 aa12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 Krt9Q6RHW0 743 aa12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 Brd2Q7JJ13 798 aaKnown RBP12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 Hexim1Q8R409 356 aaKnown RBP12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 Lrp2bpQ9D4C6 346 aa12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 Fyb2A2A995 729 aa12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 Gm5624F6ZZG8 207 aa12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 Pafah1b1P63005 410 aaKnown RBP12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 Lrrfip1Q3UZ39 729 aaKnown RBP12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 Zkscan4Q5SZT6 480 aa12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 Yipf1Q91VU1 306 aa12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 Tbc1d4Q8BYJ6 1307 aa12.13□□□□□ -0.47
Msh3-202ENSMUST00000185852 Gm3893E9Q1I1 302 aa12.12□□□□□ -0.47
Msh3-202ENSMUST00000185852 Tbc1d9bQ5SVR0 1263 aa12.12□□□□□ -0.47
Msh3-202ENSMUST00000185852 IqcgQ80W32 419 aa12.12□□□□□ -0.47
Msh3-202ENSMUST00000185852 Bmp2kQ91Z96 1138 aa12.12□□□□□ -0.47
Msh3-202ENSMUST00000185852 Gjb4Q02738 266 aa12.12□□□□□ -0.47
Msh3-202ENSMUST00000185852 Adgra1Q8C4G9 578 aa12.12□□□□□ -0.47
Msh3-202ENSMUST00000185852 Alg3Q8K2A8 438 aa12.12□□□□□ -0.47
Msh3-202ENSMUST00000185852 Arhgef6Q8K4I3 771 aa12.12□□□□□ -0.47
Msh3-202ENSMUST00000185852 Uchl5Q9WUP7 329 aa12.12□□□□□ -0.47
Msh3-202ENSMUST00000185852 Spata31d1bE9QA57 1361 aa12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Abcb4P21440 1276 aa12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Capza3P70190 299 aa12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Cyp4x1Q6A152 507 aa12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Cabp7Q91ZM8 215 aa12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms