RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 Gjb4Q02738 266 aa7.82□□□□□ -1.16
Col6a6-201ENSMUST00000060896 ArsiQ32KI9 573 aa7.82□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Hexim1Q8R409 356 aaKnown RBP7.82□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Cyp2ab1S4R196 498 aa7.82□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Prr29B1ARI9 187 aa7.82□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Gm10134F6ZQC6 126 aa7.82□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Haus6Q6NV99 933 aaKnown RBP7.82□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Oxsr1Q6P9R2 527 aa7.82□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Kif1bpQ6ZPU9 617 aa7.82□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Spag5Q7TME2 1165 aa7.82□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Caps2Q8BUG5 550 aa7.82□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Hmgb2P30681 210 aaKnown RBP7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Nf2P46662 596 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Snap25P60879 206 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Fxr1Q61584 677 aaKnown RBP7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Pim2Q62070 370 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Glis3Q6XP49 780 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Rab11fip4Q8BQP8 635 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Cc2d1bQ8BRN9 848 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 MbipQ99LQ1 341 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 NapaQ9DB05 295 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Pkd2l2Q9JLG4 621 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Ccnt1Q9QWV9 724 aaKnown RBP7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Plekhg2Q6KAU7 1340 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Parp2O88554 559 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Anp32eP97822 260 aaKnown RBP7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Chrna5Q2MKA5 467 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Aak1Q3UHJ0 959 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Pcdhb14Q6PB90 796 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Phldb2Q8K1N2 1249 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Matr3Q8K310 846 aaKnown RBP7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 MypopQ8R4U1 393 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Arl8aQ8VEH3 186 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Sept14Q9DA97 430 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Tfap4Q9JIZ5 338 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Pex3Q9QXY9 372 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Stag2O35638 1231 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 RubcnlQ3TD16 648 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Nom1Q3UFM5 854 aaKnown RBP7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Paf1Q8K2T8 535 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Trim59Q922Y2 403 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Rnf34Q99KR6 376 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 MicalclQ9D5U9 680 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Znf287Q9EQB9 759 aa7.81□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Odf2A3KGV1 830 aaKnown RBP7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Kiaa0319Q5SZV5 1081 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Mtss1lQ6P9S0 715 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Zbtb39Q6PDK0 712 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Kcnf1Q7TSH7 493 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Mei4Q8BRM6 389 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Hs2st1Q8R3H7 356 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Trmt112Q9DCG9 125 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Pik3c2aQ61194 1686 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Nme9A0A1L1SUL6 329 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Gucy1a2F8VQK3 730 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Spata18Q0P557 537 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 MaeaQ4VC33 396 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Kctd1Q5M956 257 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Ctr9Q62018 1173 aaKnown RBP7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Zfp251Q6PCX8 632 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Atp1a2Q6PIE5 1020 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Zfp397Q7TNK4 527 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Cep128Q8BI22 1102 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 E4f1Q8CCE9 783 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Ppil4Q9CXG3 492 aaKnown RBP7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Saal1Q9D2C2 474 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Abcb6Q9DC29 842 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Slc39a2G3X943 309 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Alppl2P24823 529 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Cacna2d4Q5RJF7 1116 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Hspa4Q61316 841 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Pde1cQ64338 706 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Ccdc93Q7TQK5 629 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Alx1Q8C8B0 326 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Brd3Q8K2F0 726 aaKnown RBP7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Sumf1Q8R0F3 372 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Cacnb1Q8R3Z5 597 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Pdcd6ipQ9WU78 869 aaKnown RBP7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Col14a1Q80X19 1797 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Carmil3Q3UFQ8 1375 aa7.8□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Gli3Q61602 1583 aa7.79□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Fam186bD3Z420 943 aa7.79□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Serpinb6bO08804 377 aa7.79□□□□□ -1.16
Col6a6-201ENSMUST00000060896 DnttP09838 530 aa7.79□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Gna11P21278 359 aa7.79□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Fam178bQ24JP3 464 aa7.79□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Q66JV7 365 aa7.79□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Tas2r124Q7M718 309 aa7.79□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Cep85Q8BMK0 761 aa7.79□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Ankk1Q8BZ25 745 aa7.79□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Dnm3Q8BZ98 863 aa7.79□□□□□ -1.16
Col6a6-201ENSMUST00000060896 NelfbQ8C4Y3 580 aa7.79□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Cbx6Q9DBY5 414 aa7.79□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Egfl6Q9JJZ5 550 aa7.79□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Crb1Q8VHS2 1405 aa7.79□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Ccdc191J3QQ27 883 aa7.79□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Cyp7b1Q60991 507 aa7.79□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Pcdha12Q91Y18 950 aa7.79□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Nr2e3Q9QXZ7 395 aa7.79□□□□□ -1.16
Col6a6-201ENSMUST00000060896 Gm38392E9Q2A2 434 aa7.79□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms