RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Hexim1Q8R409 356 aaKnown RBP10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Foxo3Q9WVH4 672 aa10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Carmil3Q3UFQ8 1375 aa10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Pak1O88643 545 aa10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Islr2Q5RKR3 745 aa10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Prl2c1Q5SVL9 228 aa10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Zrsr2Q62377 462 aaKnown RBP10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Jade2Q6ZQF7 829 aa10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 RbsnQ80Y56 783 aa10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Slx1bQ8BX32 270 aa10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 EhhadhQ9DBM2 718 aa10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Robo1O89026 1612 aa10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Usp13Q5BKP2 858 aa10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Slc38a10Q5I012 1090 aa10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Ctr9Q62018 1173 aaKnown RBP10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 HelbQ6NVF4 1074 aa10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Fam177a1Q8BR63 207 aa10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Kif2bQ8C0N1 668 aa10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Terb1Q8C0V1 768 aa10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Ndufb9Q9CQJ8 179 aa10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 NapgQ9CWZ7 312 aa10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Trip6Q9Z1Y4 480 aa10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Tbc1d2B1AVH7 922 aa10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Nmt2O70311 529 aa10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Sox5P35710 763 aa10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Wdr70Q3TWF6 657 aa10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Cep131Q62036 1060 aa10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Ncapg2Q6DFV1 1138 aa10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Hps6Q8BLY7 805 aa10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Dnajc14Q921R4 703 aa10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 LpxnQ99N69 386 aa10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Ccdc43Q9CR29 222 aaKnown RBP10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Mis18aQ9CZJ6 204 aa10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Klf15Q9EPW2 415 aa10.96□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Slit1Q80TR4 1531 aa10.96□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Pip4k2aO70172 405 aa10.96□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Cd3dP04235 173 aa10.96□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Fchsd1Q6PFY1 688 aa10.96□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Stn1Q8K2X3 378 aa10.96□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Rnf34Q99KR6 376 aa10.96□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Ppil4Q9CXG3 492 aaKnown RBP10.96□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Thap2Q9D305 217 aa10.96□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Foxo4Q9WVH3 505 aa10.96□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Tet3Q8BG87 1668 aa10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 ZyxQ62523 564 aa10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Slc44a1Q6X893 653 aa10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Zmynd15Q8C0R7 736 aa10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Hgh1Q8C3I8 393 aa10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Sde2Q8K1J5 448 aaKnown RBP10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Knop1Q9Z2Q2 478 aaKnown RBP10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Ltbp4Q8K4G1 1666 aa10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Gm30191A0A0U1RNT7 187 aa10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Nek1P51954 1203 aa10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Asic3Q6X1Y6 530 aa10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Cep85Q8BMK0 761 aa10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Rasgrp4Q8BTM9 673 aa10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Washc1Q8VDD8 475 aa10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Prc1Q99K43 603 aaKnown RBP10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Gm5580A0A0N4SVP8 411 aa10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Fam186bD3Z420 943 aa10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Rgs22G3UYX5 1258 aa10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Lrrc6O88978 473 aa10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Mcm7Q61881 719 aaKnown RBP10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Usp50Q6P8X6 390 aa10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Enox1Q8BHR2 643 aaKnown RBP10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Pm20d1Q8C165 503 aa10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Ccdc14Q8K2J4 934 aa10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Mtmr6Q8VE11 617 aa10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Kcnq5Q9JK45 933 aa10.95□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Gucy1b3O54865 620 aa10.94□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Gucy2cQ3UWA6 1072 aa10.94□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Sept9Q80UG5 583 aa10.94□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Cd274Q9EP73 290 aa10.94□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 GabrdP22933 449 aa10.94□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 HmmrQ00547 794 aaKnown RBP10.94□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Znf496Q5SXI5 585 aa10.94□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Glis3Q6XP49 780 aa10.94□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Tas2r124Q7M718 309 aa10.94□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Gm28042B7ZCM9 1014 aa10.94□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Eif6O55135 245 aa10.94□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Adssl1P28650 457 aa10.94□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Atp1b3P97370 278 aa10.94□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 ErmnQ5EBJ4 281 aa10.94□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 MmeQ61391 750 aa10.94□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Clec16aQ80U30 1036 aa10.94□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Stac3Q8BZ71 360 aa10.94□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Def6Q8C2K1 630 aa10.94□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Mfap3Q922T2 349 aa10.94□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Clip2Q9Z0H8 1047 aa10.94□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Kcnh4A2A5F7 1018 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Spocd1B1ASB6 936 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Gm10378F6XQQ1 160 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Nfatc2ipO09130 412 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 ChkbO55229 394 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Fam107bQ3TGF2 131 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Bbof1Q3V079 533 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Nab2Q61127 525 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Gpbp1Q6NXH3 473 aaKnown RBP10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Rbm15bQ6PHZ5 887 aaKnown RBP10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Shank2Q80Z38 1476 aa10.93□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms