RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Stag1Q9D3E6 1258 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Fam162aQ9D6U8 155 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Rrn3B2RS91 656 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Cops6O88545 324 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Mks1Q5SW45 561 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Tbx2Q60707 711 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Sh3gl3Q62421 347 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Cfap206Q6PE87 622 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Gm7247Q6UY52 187 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Tada3Q8R0L9 432 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 MthfrQ9WU20 654 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Apol7bB1AQP7 369 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Kifc2O08672 792 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Ncf1Q09014 390 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Apol7eQ3UZ24 369 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Ccdc28bQ8CEG5 200 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 P3h4Q8K2B0 443 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 TnmdQ9EP64 317 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Mbd3Q9Z2D8 285 aaKnown RBP9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 5830473C10RikF8VQ07 620 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 FcgrtQ61559 365 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Krt73Q6NXH9 539 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 RalylQ8BTF8 293 aa9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Rpl17Q9CPR4 184 aaKnown RBP9.94□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Igbp1Q61249 340 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Fbxo41Q6NS60 873 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 JmyQ9QXM1 983 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Fgfr1opQ66JX5 399 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Ccdc12Q8R344 166 aaKnown RBP9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Xpo4Q9ESJ0 1151 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Ccdc152E9PX14 254 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Dnajc21E9Q8D0 531 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Man1a1P45700 655 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Atp8a1P70704 1164 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 ScocQ78YZ6 125 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 NemfQ8CCP0 1064 aaKnown RBP9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Erbb4Q61527 1308 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 AfpP02772 605 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Lzts1P60853 599 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Vps45P97390 570 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Tgoln2Q62314 363 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Tacc1Q6Y685 774 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Ano1Q8BHY3 960 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Gjc2Q8BQU6 440 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Eva1aQ91WM6 156 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Eif4enif1Q9EST3 983 aaKnown RBP9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 BcamQ9R069 622 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Tagln3Q9R1Q8 199 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Nme9A0A1L1SUL6 329 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Gm1661E9Q963 441 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Vps39Q8R5L3 886 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Ddi1Q9DAF3 408 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Bcar3Q9QZK2 820 aa9.93□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Ccnb1P24860 430 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Mmp14P53690 582 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Cnnm1Q0GA42 951 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Ube2r2Q6ZWZ2 238 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Klhl7Q8BUL5 586 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Gtf2e1Q9D0D5 440 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Cul5Q9D5V5 780 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 2310002L09RikQ9D7L5 217 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 IgtpQ9DCE9 423 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Fchsd1Q6PFY1 688 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Etfrf1Q91V16 86 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Bhmt2Q91WS4 363 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Clip2Q9Z0H8 1047 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Hoxc8P09025 242 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Mum1Q6DID5 682 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Mettl6Q8BVH9 282 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Tsga8Q9JJL0 238 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Cbx8Q9QXV1 362 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Gm10563F6WIE4 79 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 B020004C17RikJ3QP07 232 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Eef1bO70251 225 aaKnown RBP9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Map3k12Q60700 888 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Nucks1Q80XU3 234 aaKnown RBP9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 PolrmtQ8BKF1 1207 aaKnown RBP9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Asb16Q8VHS5 453 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 UvssaQ9D479 717 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Ttc25Q9D4B2 624 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 MvpQ9EQK5 861 aa9.92□□□□□ -0.82
Clcn3-202ENSMUST00000056508 EsrraO08580 422 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Rplp1P47955 114 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Pank2Q3U4S0 443 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 C87499Q3UX49 493 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Zranb1Q7M760 708 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 GphnQ8BUV3 769 aaKnown RBP9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Naa25Q8BWZ3 972 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Atad3Q925I1 591 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 St13Q99L47 371 aaKnown RBP9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Mis18aQ9CZJ6 204 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Gbp4A4UUI3 631 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 RapsnP12672 412 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Cd19P25918 547 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 PpardP35396 440 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Olfr859Q7TRF5 309 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Arid5bQ8BM75 1188 aaKnown RBP9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Mta3Q924K8 591 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Nol7Q9D7Z3 254 aaKnown RBP9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Clcn2Q9R0A1 908 aa9.91□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms