RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Sept2P42208 361 aaKnown RBP10.06□□□□□ -0.8
Trim39-201ENSMUST00000042717 Wnt10bP48614 389 aa10.06□□□□□ -0.8
Trim39-201ENSMUST00000042717 Tmtc2Q56A06 836 aa10.06□□□□□ -0.8
Trim39-201ENSMUST00000042717 Trappc12Q8K2L8 797 aa10.06□□□□□ -0.8
Trim39-201ENSMUST00000042717 Wasf1Q8R5H6 559 aa10.06□□□□□ -0.8
Trim39-201ENSMUST00000042717 Mei1Q9D4I2 1268 aa10.06□□□□□ -0.8
Trim39-201ENSMUST00000042717 Clic4Q9QYB1 253 aa10.06□□□□□ -0.8
Trim39-201ENSMUST00000042717 Wdr19Q3UGF1 1341 aa10.06□□□□□ -0.8
Trim39-201ENSMUST00000042717 Mical3Q8CJ19 1993 aa10.06□□□□□ -0.8
Trim39-201ENSMUST00000042717 Gm9992B2RWK3 458 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Syce3B5KM66 88 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Ppef2O35385 757 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Slc27a1Q60714 646 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Unc93aQ710D3 458 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Stk38Q91VJ4 465 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Mtmr4Q91XS1 1190 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Hip1rQ9JKY5 1068 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Ltbp2O08999 1813 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Fdx1P46656 188 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Kmt5bQ3U8K7 883 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Usp28Q5I043 1051 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Kctd1Q5M956 257 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Psen2Q61144 448 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Casc1Q6TDU8 730 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 LdhdQ7TNG8 484 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Dnaaf2Q8BPI1 814 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Evc2Q8K1G2 1220 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Eid1Q9DCR4 169 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Tfap4Q9JIZ5 338 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 ImpactO55091 318 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 CfhP06909 1234 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Mybl2P48972 704 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Ube2hP62257 183 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Gtf2f1Q3THK3 508 aaKnown RBP10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Tmed8Q3UHI4 326 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Scnn1aQ61180 699 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Haus6Q6NV99 933 aaKnown RBP10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Atp1a3Q6PIC6 1013 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Stac3Q8BZ71 360 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Mknk2Q8CDB0 459 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Sel1lQ9Z2G6 790 aa10.05□□□□□ -0.8
Trim39-201ENSMUST00000042717 Igsf9bE9PZ19 1328 aa10.04□□□□□ -0.8
Trim39-201ENSMUST00000042717 Akap2O54931 893 aa10.04□□□□□ -0.8
Trim39-201ENSMUST00000042717 Tmx3Q8BXZ1 456 aa10.04□□□□□ -0.8
Trim39-201ENSMUST00000042717 Kbtbd13Q8C828 458 aa10.04□□□□□ -0.8
Trim39-201ENSMUST00000042717 Glis2Q8VDL9 521 aa10.04□□□□□ -0.8
Trim39-201ENSMUST00000042717 Txnrd2Q9JLT4 524 aa10.04□□□□□ -0.8
Trim39-201ENSMUST00000042717 UncxO08934 530 aa10.04□□□□□ -0.8
Trim39-201ENSMUST00000042717 MycnP03966 462 aaKnown RBP10.04□□□□□ -0.8
Trim39-201ENSMUST00000042717 Gxylt1Q3UHH8 404 aa10.04□□□□□ -0.8
Trim39-201ENSMUST00000042717 Prr7Q3V0I2 269 aa10.04□□□□□ -0.8
Trim39-201ENSMUST00000042717 Myo19Q5SV80 963 aa10.04□□□□□ -0.8
Trim39-201ENSMUST00000042717 Arhgef2Q60875 985 aa10.04□□□□□ -0.8
Trim39-201ENSMUST00000042717 Srek1Q8BZX4 494 aaKnown RBP10.04□□□□□ -0.8
Trim39-201ENSMUST00000042717 Wdr24Q8CFJ9 790 aa10.04□□□□□ -0.8
Trim39-201ENSMUST00000042717 Ttll1Q91V51 423 aa10.04□□□□□ -0.8
Trim39-201ENSMUST00000042717 Tob2Q9JM55 345 aa10.04□□□□□ -0.8
Trim39-201ENSMUST00000042717 Sema3fO88632 785 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Prkg1P0C605 671 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Mcm3P25206 812 aaKnown RBP10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Kif4P33174 1231 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Ttbk2Q3UVR3 1243 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Calhm4Q8CE93 315 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Slc4a8Q8JZR6 1089 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Hnrnpul1Q8VDM6 859 aaKnown RBP10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Prpf3Q922U1 683 aaKnown RBP10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Tjap1Q9DCD5 539 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Atp8b3Q6UQ17 1335 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Dcdc2bF7BCK0 340 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 PtmaP26350 111 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Fam89aQ14BJ1 175 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Q3UJP5 209 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Oxr1Q4KMM3 866 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Polr3gQ6NXY9 223 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Gpcpd1Q8C0L9 675 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Lman1lQ8VCD3 505 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Trex1Q91XB0 314 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Galntl5Q9D4M9 431 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Wdr64Q9D565 1086 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 CsadQ9DBE0 493 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Pagr1bF6V0H0 108 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Snap25P60879 206 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Map3k9Q3U1V8 1077 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 MyrflQ3UN70 904 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Lgr6Q3UVD5 967 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Brip1Q5SXJ3 1174 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Ppp2r5bQ6PD28 497 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Mtmr3Q8K296 1196 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Inpp5bQ8K337 993 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Apbb1ipQ8R5A3 670 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Pagr1aQ99L02 253 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 Prkab1Q9R078 270 aa10.03□□□□□ -0.8
Trim39-201ENSMUST00000042717 BC048507Q80ZS7 89 aa10.02□□□□□ -0.81
Trim39-201ENSMUST00000042717 Rcan1Q9JHG6 198 aa10.02□□□□□ -0.81
Trim39-201ENSMUST00000042717 Gjb4Q02738 266 aa10.02□□□□□ -0.81
Trim39-201ENSMUST00000042717 Oog3Q3UWY1 500 aa10.02□□□□□ -0.81
Trim39-201ENSMUST00000042717 Nsrp1Q5NCR9 542 aa10.02□□□□□ -0.81
Trim39-201ENSMUST00000042717 WaplQ65Z40 1200 aaKnown RBP10.02□□□□□ -0.81
Trim39-201ENSMUST00000042717 Cyp4x1Q6A152 507 aa10.02□□□□□ -0.81
Trim39-201ENSMUST00000042717 Pip5kl1Q6U7H8 395 aa10.02□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms