RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Iqsec3Q3TES0 1195 aa18.26■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Naa16Q9DBB4 864 aa18.26■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Gpatch8A2A6A1 1505 aa18.26■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Gm28043E0CXC2 719 aa18.26■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Tsc1Q9EP53 1161 aa18.26■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Ankrd2Q9WV06 328 aa18.26■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Tnip3A0A1D5RMN0 279 aa18.26■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Liat1Q810M6 228 aa18.26■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Suds3Q8BR65 328 aa18.26■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Stag1Q9D3E6 1258 aa18.26■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Gm30191A0A0U1RNT7 187 aa18.26■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Apol7eQ3UZ24 369 aa18.26■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Rbm41Q8JZV4 413 aa18.26■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Fam207aP58468 219 aaKnown RBP18.26■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Slc4a8Q8JZR6 1089 aa18.26■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Mmp8O70138 465 aa18.26■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 CopeO89079 308 aa18.26■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Psmc2P46471 433 aa18.26■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Actn4P57780 912 aaKnown RBP18.26■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 S100a5P63084 93 aa18.26■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Nhej1Q3KNJ2 295 aa18.26■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Tex14Q7M6U3 1450 aa18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Tmtc1Q3UV71 942 aa18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Zcchc8Q9CYA6 709 aaKnown RBP18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Irs4Q9Z0Y7 1216 aa18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Atp2b4Q6Q477 1205 aa18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Morc4Q8BMD7 928 aa18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Krt36B1AQ75 473 aa18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 MgarpQ8VI64 283 aa18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Akap5D3YVF0 745 aa18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Kcnk16G5E845 292 aa18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 TsksO54887 585 aa18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Myl3P09542 204 aa18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Hace1Q3U0D9 909 aa18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 SnrkQ8VDU5 748 aa18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 CutaQ9CQ89 177 aa18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Klhl40Q9D783 621 aa18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Tcp1P11983 556 aaKnown RBP18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Gdpd2Q9ESM6 539 aa18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Ptgs1P22437 602 aa18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Gpbp1Q6NXH3 473 aaKnown RBP18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Ccdc92Q8VDN4 314 aa18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Ophn1Q99J31 802 aa18.25■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 RcvrnP34057 202 aa18.24■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Xpo4Q9ESJ0 1151 aa18.24■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Haus6Q6NV99 933 aaKnown RBP18.24■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Nfil3O08750 462 aa18.24■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Wdr7Q920I9 1489 aa18.24■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Bank1Q80VH0 783 aa18.24■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Appbp2Q9DAX9 585 aa18.24■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Zfp597E9Q6S0 419 aa18.24■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Dnm2P39054 870 aaKnown RBP18.24■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Slc10a4Q3UEZ8 437 aa18.24■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Birc2Q62210 612 aa18.24■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Strn3Q9ERG2 796 aa18.24■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Ttll12Q3UDE2 639 aa18.23■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Tshz1Q5DTH5 1084 aa18.23■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Card14Q99KF0 999 aa18.23■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Sall3Q62255 1320 aa18.23■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Gm45015A0A140LII9 184 aa18.23■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Jdp2P97875 163 aa18.23■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Gkap1Q9JMB0 366 aa18.23■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 LpxnQ99N69 386 aa18.23■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Pus7B7ZNL8 666 aaKnown RBP18.23■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Gm29094F6Q785 221 aa18.23■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Pfdn4Q3UWL8 134 aa18.23■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Tex13c2A0A0G2JGA3 530 aa18.23■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Arhgap17Q3UIA2 846 aa18.23■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Ssfa2Q922B9 1252 aa18.23■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Kif2cQ922S8 721 aa18.23■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Col20a1Q923P0 1320 aa18.23■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Rad23aP54726 363 aa18.23■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Nsmce1Q9D720 266 aa18.23■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Ccnt1Q9QWV9 724 aaKnown RBP18.23■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Gm6588E9Q3K0 461 aa18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Trim71Q1PSW8 855 aaKnown RBP18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Cacna2d2Q6PHS9 1154 aa18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Cplx3Q8R1B5 158 aa18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Mphosph6Q9D1Q1 161 aa18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Polr3cQ9D483 533 aa18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 F2rP30558 430 aa18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Uggt2E9Q4X2 1504 aa18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Gm14525B1AZA0 212 aa18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Gm2012B1B0R1 212 aa18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Aplp1Q03157 653 aa18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Gm14819Q62478 212 aa18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 GopcQ8BH60 463 aa18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Eef1gQ9D8N0 437 aaKnown RBP18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Lrrc23O35125 340 aa18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Gna14P30677 355 aa18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Rapgef5Q8C0Q9 814 aa18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Esr2O08537 530 aa18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Gadd45bP22339 160 aa18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Tbc1d9bQ5SVR0 1263 aa18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 BlvraQ9CY64 295 aa18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Rbm17Q8JZX4 405 aaKnown RBP18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Plcd3Q8K2J0 785 aa18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Med10Q9CXU0 135 aa18.22■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Gm10488Q4KL05 212 aa18.21■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Fbxo3Q9DC63 480 aa18.21■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 44.6 ms