RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Cyp7b1Q60991 507 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Trim25Q61510 634 aaKnown RBP9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Dhx40Q6PE54 779 aaKnown RBP9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Slc39a11Q8BWY7 342 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Nav1Q8CH77 1875 aa9.56□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Bpifb4A2BGH0 617 aa9.56□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Slc27a3O88561 667 aa9.56□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 EgfrQ01279 1210 aa9.56□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Pknox2Q8BG99 474 aa9.56□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Nrbp1Q99J45 535 aa9.56□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Haus2Q9CQS9 234 aa9.56□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Hip1rQ9JKY5 1068 aa9.56□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Fam83bQ0VBM2 1012 aa9.56□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Hdac4Q6NZM9 1076 aa9.56□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Dpf1Q9QX66 387 aa9.56□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Slc7a1Q09143 622 aa9.56□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Klhl10Q9D5V2 608 aa9.56□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Map9Q3TRR0 646 aa9.56□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Igbp1Q61249 340 aa9.56□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Rufy1Q8BIJ7 712 aa9.56□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Pym1Q8CHP5 203 aaKnown RBP9.56□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Gm5934D3Z4U6 212 aa9.56□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Ccdc12Q8R344 166 aaKnown RBP9.56□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Sema3fO88632 785 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Ncf1Q09014 390 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 ItpripQ3TNL8 555 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 GnptabQ69ZN6 1235 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Gpbp1Q6NXH3 473 aaKnown RBP9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Camsap3Q80VC9 1252 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Anks1bQ8BIZ1 1259 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Q8K2W9 541 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Vps18Q8R307 973 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Map3k15A2AQW0 1331 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 A0A1Y7VML8 143 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Celf1P28659 486 aaKnown RBP9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 1700013D24RikQ0P521 120 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Fam178bQ24JP3 464 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Esyt2Q3TZZ7 845 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Efcc1Q9JJF6 558 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Hic2Q9JLZ6 619 aaKnown RBP9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Ssc5dQ8BV57 1371 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Pfkfb3A7UAK5 555 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 DnttP09838 530 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 HelbQ6NVF4 1074 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Alg3Q8K2A8 438 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Ifih1Q8R5F7 1025 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Cyp2d9P11714 504 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Ctdspl2Q8BG15 465 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Tmem87aQ8BXN9 555 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Nr1i2O54915 431 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Igf2bp2Q5SF07 592 aaKnown RBP9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Klhl40Q9D783 621 aa9.55□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Frmpd4A2AFR3 1320 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Mx1P09922 631 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Maip1Q8BHE8 291 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 WdpcpQ8C456 722 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Cd274Q9EP73 290 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Nlrp5Q9R1M5 1163 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Apol10bG3X9K7 334 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 HmmrQ00547 794 aaKnown RBP9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Mdh1bQ5F204 500 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Ccdc42Q5SV66 316 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Tab2Q99K90 693 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Cbx6Q9DBY5 414 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Tiam2Q6ZPF3 1715 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Panx2Q6IMP4 677 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Taok2Q6ZQ29 1240 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Bcl2l12Q9D3J3 255 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Popdc2Q9ES82 367 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Haus7Q8BKT8 364 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 AdpgkQ8VDL4 496 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Uba5Q8VE47 403 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Pla2g12bQ99P27 195 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Sgsm1Q8BPQ7 1093 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 NelfbQ8C4Y3 580 aa9.54□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Hmx1O70218 332 aa9.53□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Atp6v1aP50516 617 aaKnown RBP9.53□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Ankk1Q8BZ25 745 aa9.53□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 WaslQ91YD9 501 aa9.53□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Cabp7Q91ZM8 215 aa9.53□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 GdaQ9R111 454 aa9.53□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Tubb5P99024 444 aaKnown RBP9.53□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Prpf40bQ80W14 870 aa9.53□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Znf131Q8K3J5 619 aa9.53□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Styxl1Q9DAR2 321 aa9.53□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Cyp2d34L7N463 504 aa9.53□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Sval3Q76I99 144 aa9.53□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Sdccag8Q80UF4 717 aa9.53□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Mfap3Q922T2 349 aa9.53□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 MeiocA2AG06 965 aa9.53□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 EmbP21995 330 aa9.53□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Haus6Q6NV99 933 aaKnown RBP9.53□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Aggf1Q7TN31 711 aa9.53□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Slitrk3Q810B9 980 aa9.53□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Golph3lQ8R088 285 aaKnown RBP9.53□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Arl6ip4Q9JM93 229 aa9.53□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Cdk4P30285 303 aa9.52□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Otop3Q80UF9 577 aa9.52□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Hdac9Q99N13 588 aa9.52□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 TbcbQ9D1E6 244 aa9.52□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms