RNA–Protein interactions for RNA: ENSMUST00000186940.6

Fn1-208, Transcript of Fibronectin, mousemouse

TSL 1 (best) BASIC

Gene Fn1, Length 1,350 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-208ENSMUST00000186940 Gm11554B1AQB2 190 aa7,59□□□□□ -1,19
Fn1-208ENSMUST00000186940 Lce3bQ9CQM7 98 aa7,59□□□□□ -1,19
Fn1-208ENSMUST00000186940 H2al1mQ9DAD9 105 aa7,59□□□□□ -1,2
Fn1-208ENSMUST00000186940 Syne1Q6ZWR6 8799 aa7,58□□□□□ -1,2
Fn1-208ENSMUST00000186940 Gm4553A0A1B0GSA9 284 aa7,54□□□□□ -1,2
Fn1-208ENSMUST00000186940 Gm11568A2A4M2 211 aa7,52□□□□□ -1,21
Fn1-208ENSMUST00000186940 Krtap9-1Q64526 186 aa7,52□□□□□ -1,21
Fn1-208ENSMUST00000186940 Gm10272F7CZ33 110 aa7,48□□□□□ -1,21
Fn1-208ENSMUST00000186940 Krtap7-1Q9D3I6 87 aa7,48□□□□□ -1,21
Fn1-208ENSMUST00000186940 Macf1Q9QXZ0 7354 aaKnown RBP7,46□□□□□ -1,21
Fn1-208ENSMUST00000186940 SmcpP15265 143 aa7,46□□□□□ -1,22
Fn1-208ENSMUST00000186940 A0A286YCP9 139 aa7,45□□□□□ -1,22
Fn1-208ENSMUST00000186940 Rps28P62858 69 aaKnown RBP7,42□□□□□ -1,22
Fn1-208ENSMUST00000186940 Kmt2dQ6PDK2 5588 aa7,4□□□□□ -1,22
Fn1-208ENSMUST00000186940 Gm12216A0A1W2P827 62 aa7,36□□□□□ -1,23
Fn1-208ENSMUST00000186940 Lce1fB9EJP6 147 aa7,3□□□□□ -1,24
Fn1-208ENSMUST00000186940 Lce1cQ9D1C5 147 aa7,3□□□□□ -1,24
Fn1-208ENSMUST00000186940 Gm2431E9Q8S1 172 aa7,29□□□□□ -1,24
Fn1-208ENSMUST00000186940 Gm11639A0A1D5RLM8 5808 aa7,25□□□□□ -1,25
Fn1-208ENSMUST00000186940 Ndufs5Q99LY9 106 aa7,22□□□□□ -1,25
Fn1-208ENSMUST00000186940 Gm45337A0A1B0GS71 263 aa7,2□□□□□ -1,26
Fn1-208ENSMUST00000186940 Romo1P60603 79 aa7,14□□□□□ -1,27
Fn1-208ENSMUST00000186940 Gm11938Q9D3H4 131 aa7,03□□□□□ -1,28
Fn1-208ENSMUST00000186940 Krtap19-4Q925H7 84 aa7,02□□□□□ -1,29
Fn1-208ENSMUST00000186940 Muc19Q6PZE0 7524 aa7,01□□□□□ -1,29
Fn1-208ENSMUST00000186940 Gm10153A0A1B0GRL1 320 aa7□□□□□ -1,29
Fn1-208ENSMUST00000186940 Sox16Q62247 57 aa6,98□□□□□ -1,29
Fn1-208ENSMUST00000186940 4933415A04RikQ9D443 101 aa6,97□□□□□ -1,29
Fn1-208ENSMUST00000186940 Mt1P02802 61 aaKnown RBP6,96□□□□□ -1,29
Fn1-208ENSMUST00000186940 Gm40460A0A1B0GR10 244 aa6,94□□□□□ -1,3
Fn1-208ENSMUST00000186940 Gm7579A0A1B0GRJ4 243 aa6,94□□□□□ -1,3
Fn1-208ENSMUST00000186940 Krtap5-5Q2TA51 241 aa6,94□□□□□ -1,3
Fn1-208ENSMUST00000186940 Krtap5-4Q62220 223 aa6,94□□□□□ -1,3
Fn1-208ENSMUST00000186940 Hmcn1D3YXG0 5634 aa6,91□□□□□ -1,3
Fn1-208ENSMUST00000186940 Tnp1P10856 55 aa6,91□□□□□ -1,3
Fn1-208ENSMUST00000186940 Gpr98Q8VHN7 6298 aaKnown RBP6,9□□□□□ -1,3
Fn1-208ENSMUST00000186940 Gm39115A0A1B0GSH7 232 aa6,86□□□□□ -1,31
Fn1-208ENSMUST00000186940 Pcp4P63054 62 aa6,76□□□□□ -1,33
Fn1-208ENSMUST00000186940 Lce3cQ91V05 98 aa6,76□□□□□ -1,33
Fn1-208ENSMUST00000186940 Gm3646F6S692 53 aa6,73□□□□□ -1,33
Fn1-208ENSMUST00000186940 DstQ91ZU6 7393 aaKnown RBP6,67□□□□□ -1,34
Fn1-208ENSMUST00000186940 Lce3dE9Q8V1 98 aa6,66□□□□□ -1,34
Fn1-208ENSMUST00000186940 Gm40193A0A1B0GT39 78 aa6,58□□□□□ -1,36
Fn1-208ENSMUST00000186940 Krtap4-16Q91W93 202 aa6,52□□□□□ -1,37
Fn1-208ENSMUST00000186940 Mt3P28184 68 aa6,5□□□□□ -1,37
Fn1-208ENSMUST00000186940 NebE9Q1W3 7152 aa6,47□□□□□ -1,37
Fn1-208ENSMUST00000186940 Sprr2fO70557 76 aa6,44□□□□□ -1,38
Fn1-208ENSMUST00000186940 Lce3eF8VQJ0 98 aa6,44□□□□□ -1,38
Fn1-208ENSMUST00000186940 Lce3fQ6PAI4 98 aa6,44□□□□□ -1,38
Fn1-208ENSMUST00000186940 Gm45618A0A1B0GSA0 219 aa6,42□□□□□ -1,38
Fn1-208ENSMUST00000186940 ObscnA2AAJ9 8891 aaKnown RBP6,41□□□□□ -1,38
Fn1-208ENSMUST00000186940 Krtap31-2Q8CAY5 177 aa6,39□□□□□ -1,39
Fn1-208ENSMUST00000186940 SvipQ3UZP4 77 aa6,29□□□□□ -1,4
Fn1-208ENSMUST00000186940 4933428G20RikQ9D3X4 101 aa6,27□□□□□ -1,41
Fn1-208ENSMUST00000186940 Gm10337F7DEP7 55 aa6,25□□□□□ -1,41
Fn1-208ENSMUST00000186940 AhnakE9Q616 5656 aaKnown RBP6,17□□□□□ -1,42
Fn1-208ENSMUST00000186940 Lce3aQ497I5 98 aa6,16□□□□□ -1,42
Fn1-208ENSMUST00000186940 Gm10100J3QK64 120 aa6,13□□□□□ -1,43
Fn1-208ENSMUST00000186940 Gm11567Q9D141 195 aa6,04□□□□□ -1,44
Fn1-208ENSMUST00000186940 Gm29735A0A1B0GT06 219 aa6,01□□□□□ -1,45
Fn1-208ENSMUST00000186940 Sprr2dO70555 85 aa6,01□□□□□ -1,45
Fn1-208ENSMUST00000186940 Sprr2eO70556 76 aa5,74□□□□□ -1,49
Fn1-208ENSMUST00000186940 Mp68P56379 58 aa5,66□□□□□ -1,5
Fn1-208ENSMUST00000186940 Gm10024A0A0A0MQA4 119 aa5,54□□□□□ -1,52
Fn1-208ENSMUST00000186940 Gm20538F6Z9R1 75 aa5,54□□□□□ -1,52
Fn1-208ENSMUST00000186940 Krtap31-1Q9D644 177 aa5,4□□□□□ -1,55
Fn1-208ENSMUST00000186940 Gm10142J3KMP7 120 aa5,35□□□□□ -1,55
Fn1-208ENSMUST00000186940 Sprr2hO70559 108 aa5,19□□□□□ -1,58
Fn1-208ENSMUST00000186940 Muc16A0A140LJ72 8478 aa5,13□□□□□ -1,59
Fn1-208ENSMUST00000186940 1110025L11RikO09048 78 aa4,99□□□□□ -1,61
Fn1-208ENSMUST00000186940 Krtap6-5Q925H3 78 aa4,99□□□□□ -1,61
Fn1-208ENSMUST00000186940 Gm10229O08631 77 aa4,49□□□□□ -1,69
Fn1-208ENSMUST00000186940 Ndufaf8A2AMZ4 74 aa4,19□□□□□ -1,74
Fn1-208ENSMUST00000186940 Krtap5-1Q64507 230 aa4,14□□□□□ -1,75
Fn1-208ENSMUST00000186940 Sprr2bO70554 98 aa4,06□□□□□ -1,76
Fn1-208ENSMUST00000186940 Gm4559A4IF42 199 aa4,05□□□□□ -1,76
Fn1-208ENSMUST00000186940 Krtap6-2O08884 159 aa4,02□□□□□ -1,77
Fn1-208ENSMUST00000186940 Krtap21-1Q925H4 128 aa4,01□□□□□ -1,77
Fn1-208ENSMUST00000186940 Gm9112A2AI92 75 aa3,63□□□□□ -1,83
Fn1-208ENSMUST00000186940 Phgr1Q8K0G7 91 aa3,25□□□□□ -1,89
Retrieved 80 of 22,080 RNA–protein pairs in 8,9 ms