RNA–Protein interactions for RNA: ENSMUST00000143379.1

Sqstm1-205, Transcript of Sequestosome-1, mousemouse

TSL 5 BASIC

Gene Sqstm1, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-205ENSMUST00000143379 Sox16Q62247 57 aa6,64□□□□□ -1,35
Sqstm1-205ENSMUST00000143379 Uqcr11Q9CPX8 56 aa6,61□□□□□ -1,35
Sqstm1-205ENSMUST00000143379 H2al1bA0A087WP11 105 aa6,56□□□□□ -1,36
Sqstm1-205ENSMUST00000143379 Gm45337A0A1B0GS71 263 aa6,52□□□□□ -1,37
Sqstm1-205ENSMUST00000143379 Hmcn1D3YXG0 5634 aa6,47□□□□□ -1,37
Sqstm1-205ENSMUST00000143379 Gm10337F7DEP7 55 aa6,46□□□□□ -1,38
Sqstm1-205ENSMUST00000143379 NebE9Q1W3 7152 aa6,45□□□□□ -1,38
Sqstm1-205ENSMUST00000143379 Camk2n1Q6QWF9 78 aa6,45□□□□□ -1,38
Sqstm1-205ENSMUST00000143379 DstQ91ZU6 7393 aaKnown RBP6,44□□□□□ -1,38
Sqstm1-205ENSMUST00000143379 SvipQ3UZP4 77 aa6,43□□□□□ -1,38
Sqstm1-205ENSMUST00000143379 H2al1kJ3QP08 105 aa6,41□□□□□ -1,38
Sqstm1-205ENSMUST00000143379 H2al1mQ9DAD9 105 aa6,41□□□□□ -1,38
Sqstm1-205ENSMUST00000143379 Lce3bQ9CQM7 98 aa6,34□□□□□ -1,39
Sqstm1-205ENSMUST00000143379 Gm39115A0A1B0GSH7 232 aa6,32□□□□□ -1,4
Sqstm1-205ENSMUST00000143379 Lce1fB9EJP6 147 aa6,28□□□□□ -1,4
Sqstm1-205ENSMUST00000143379 Lce1cQ9D1C5 147 aa6,28□□□□□ -1,4
Sqstm1-205ENSMUST00000143379 4933415A04RikQ9D443 101 aa6,27□□□□□ -1,41
Sqstm1-205ENSMUST00000143379 Krtap4-16Q91W93 202 aa6,26□□□□□ -1,41
Sqstm1-205ENSMUST00000143379 Gm40460A0A1B0GR10 244 aa6,24□□□□□ -1,41
Sqstm1-205ENSMUST00000143379 Gm7579A0A1B0GRJ4 243 aa6,24□□□□□ -1,41
Sqstm1-205ENSMUST00000143379 Krtap5-5Q2TA51 241 aa6,24□□□□□ -1,41
Sqstm1-205ENSMUST00000143379 Krtap5-4Q62220 223 aa6,24□□□□□ -1,41
Sqstm1-205ENSMUST00000143379 Gm10153A0A1B0GRL1 320 aa6,22□□□□□ -1,41
Sqstm1-205ENSMUST00000143379 Krtap19-4Q925H7 84 aa6,13□□□□□ -1,43
Sqstm1-205ENSMUST00000143379 Gm10272F7CZ33 110 aa6,08□□□□□ -1,44
Sqstm1-205ENSMUST00000143379 Gm45618A0A1B0GSA0 219 aa6,05□□□□□ -1,44
Sqstm1-205ENSMUST00000143379 Ndufs5Q99LY9 106 aa6,04□□□□□ -1,44
Sqstm1-205ENSMUST00000143379 Krtap7-1Q9D3I6 87 aa6,01□□□□□ -1,45
Sqstm1-205ENSMUST00000143379 Gm3646F6S692 53 aa5,98□□□□□ -1,45
Sqstm1-205ENSMUST00000143379 Gm3880A0A1B0GSB3 72 aa5,95□□□□□ -1,46
Sqstm1-205ENSMUST00000143379 Mt1P02802 61 aaKnown RBP5,9□□□□□ -1,46
Sqstm1-205ENSMUST00000143379 Sprr2fO70557 76 aa5,89□□□□□ -1,47
Sqstm1-205ENSMUST00000143379 Gm11938Q9D3H4 131 aa5,88□□□□□ -1,47
Sqstm1-205ENSMUST00000143379 AhnakE9Q616 5656 aaKnown RBP5,88□□□□□ -1,47
Sqstm1-205ENSMUST00000143379 Gm12216A0A1W2P827 62 aa5,75□□□□□ -1,49
Sqstm1-205ENSMUST00000143379 Romo1P60603 79 aa5,62□□□□□ -1,51
Sqstm1-205ENSMUST00000143379 Mt3P28184 68 aa5,49□□□□□ -1,53
Sqstm1-205ENSMUST00000143379 Lce3cQ91V05 98 aa5,46□□□□□ -1,54
Sqstm1-205ENSMUST00000143379 Lce3dE9Q8V1 98 aa5,37□□□□□ -1,55
Sqstm1-205ENSMUST00000143379 Tnp1P10856 55 aa5,35□□□□□ -1,55
Sqstm1-205ENSMUST00000143379 ObscnA2AAJ9 8891 aaKnown RBP5,29□□□□□ -1,56
Sqstm1-205ENSMUST00000143379 A0A1Y7VLE6 161 aa5,27□□□□□ -1,57
Sqstm1-205ENSMUST00000143379 Gm40193A0A1B0GT39 78 aa5,26□□□□□ -1,57
Sqstm1-205ENSMUST00000143379 Lce3eF8VQJ0 98 aa5,18□□□□□ -1,58
Sqstm1-205ENSMUST00000143379 Lce3fQ6PAI4 98 aa5,18□□□□□ -1,58
Sqstm1-205ENSMUST00000143379 Gm10100J3QK64 120 aa5,15□□□□□ -1,59
Sqstm1-205ENSMUST00000143379 Mp68P56379 58 aa5,09□□□□□ -1,59
Sqstm1-205ENSMUST00000143379 4933428G20RikQ9D3X4 101 aa4,97□□□□□ -1,61
Sqstm1-205ENSMUST00000143379 Lce3aQ497I5 98 aa4,95□□□□□ -1,62
Sqstm1-205ENSMUST00000143379 Sprr2eO70556 76 aa4,81□□□□□ -1,64
Sqstm1-205ENSMUST00000143379 Sprr2dO70555 85 aa4,77□□□□□ -1,65
Sqstm1-205ENSMUST00000143379 Muc16A0A140LJ72 8478 aa4,74□□□□□ -1,65
Sqstm1-205ENSMUST00000143379 Sprr2hO70559 108 aa4,72□□□□□ -1,65
Sqstm1-205ENSMUST00000143379 A0A1Y7VJ07 166 aa4,64□□□□□ -1,67
Sqstm1-205ENSMUST00000143379 Gm20538F6Z9R1 75 aa4,63□□□□□ -1,67
Sqstm1-205ENSMUST00000143379 Gm10024A0A0A0MQA4 119 aa4,57□□□□□ -1,68
Sqstm1-205ENSMUST00000143379 Gm29735A0A1B0GT06 219 aa4,51□□□□□ -1,69
Sqstm1-205ENSMUST00000143379 Ndufaf8A2AMZ4 74 aa4,36□□□□□ -1,71
Sqstm1-205ENSMUST00000143379 Gm11567Q9D141 195 aa4,29□□□□□ -1,72
Sqstm1-205ENSMUST00000143379 Gm10142J3KMP7 120 aa4,22□□□□□ -1,73
Sqstm1-205ENSMUST00000143379 A030003K21RikA0A1Y7VIM3 128 aa4,2□□□□□ -1,74
Sqstm1-205ENSMUST00000143379 1110025L11RikO09048 78 aa4,05□□□□□ -1,76
Sqstm1-205ENSMUST00000143379 Krtap6-5Q925H3 78 aa4,05□□□□□ -1,76
Sqstm1-205ENSMUST00000143379 Krtap28-10A0A1Y7VP58 119 aa4,02□□□□□ -1,77
Sqstm1-205ENSMUST00000143379 Krtap5-1Q64507 230 aa3,88□□□□□ -1,79
Sqstm1-205ENSMUST00000143379 Krtap28-13A0A087WQP5 138 aa3,87□□□□□ -1,79
Sqstm1-205ENSMUST00000143379 A030005K14RikA0A1Y7VNY1 122 aa3,82□□□□□ -1,8
Sqstm1-205ENSMUST00000143379 Gm9112A2AI92 75 aa3,8□□□□□ -1,8
Sqstm1-205ENSMUST00000143379 Krtap31-2Q8CAY5 177 aa3,79□□□□□ -1,8
Sqstm1-205ENSMUST00000143379 Gm10229O08631 77 aa3,65□□□□□ -1,83
Sqstm1-205ENSMUST00000143379 Sprr2bO70554 98 aa3,65□□□□□ -1,83
Sqstm1-205ENSMUST00000143379 Krtap31-1Q9D644 177 aa3,61□□□□□ -1,83
Sqstm1-205ENSMUST00000143379 Gm7544A0A1Y7VJ58 118 aa3,46□□□□□ -1,86
Sqstm1-205ENSMUST00000143379 A030014E15RikA0A1Y7VJV2 120 aa3,44□□□□□ -1,86
Sqstm1-205ENSMUST00000143379 Krtap6-2O08884 159 aa3,38□□□□□ -1,87
Sqstm1-205ENSMUST00000143379 Krtap21-1Q925H4 128 aa3,27□□□□□ -1,89
Sqstm1-205ENSMUST00000143379 Gm6217A0A1Y7VJK9 128 aa3,19□□□□□ -1,9
Sqstm1-205ENSMUST00000143379 A0A286YCP9 139 aa3,17□□□□□ -1,9
Sqstm1-205ENSMUST00000143379 Gm4559A4IF42 199 aa2,67□□□□□ -1,98
Sqstm1-205ENSMUST00000143379 Phgr1Q8K0G7 91 aa2,63□□□□□ -1,99
Retrieved 80 of 22,080 RNA–protein pairs in 37,4 ms