RNA–Protein interactions for RNA: ENSMUST00000113686.7

Tpm1-206, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 998 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-206ENSMUST00000113686 Krtap7-1Q9D3I6 87 aa7,12□□□□□ -1,27
Tpm1-206ENSMUST00000113686 Gm10272F7CZ33 110 aa7,1□□□□□ -1,27
Tpm1-206ENSMUST00000113686 H2al1kJ3QP08 105 aa7,08□□□□□ -1,28
Tpm1-206ENSMUST00000113686 H2al1mQ9DAD9 105 aa7,06□□□□□ -1,28
Tpm1-206ENSMUST00000113686 Gm2431E9Q8S1 172 aa7,04□□□□□ -1,28
Tpm1-206ENSMUST00000113686 Rps28P62858 69 aaKnown RBP7,02□□□□□ -1,29
Tpm1-206ENSMUST00000113686 Muc19Q6PZE0 7524 aa7□□□□□ -1,29
Tpm1-206ENSMUST00000113686 Gpr98Q8VHN7 6298 aaKnown RBP6,98□□□□□ -1,29
Tpm1-206ENSMUST00000113686 Gm45337A0A1B0GS71 263 aa6,93□□□□□ -1,3
Tpm1-206ENSMUST00000113686 Lce1fB9EJP6 147 aa6,9□□□□□ -1,3
Tpm1-206ENSMUST00000113686 Lce1cQ9D1C5 147 aa6,9□□□□□ -1,3
Tpm1-206ENSMUST00000113686 Gm12216A0A1W2P827 62 aa6,84□□□□□ -1,31
Tpm1-206ENSMUST00000113686 Gm10153A0A1B0GRL1 320 aa6,76□□□□□ -1,33
Tpm1-206ENSMUST00000113686 Hmcn1D3YXG0 5634 aa6,76□□□□□ -1,33
Tpm1-206ENSMUST00000113686 Romo1P60603 79 aa6,71□□□□□ -1,34
Tpm1-206ENSMUST00000113686 Ndufs5Q99LY9 106 aa6,71□□□□□ -1,34
Tpm1-206ENSMUST00000113686 Gm11938Q9D3H4 131 aa6,69□□□□□ -1,34
Tpm1-206ENSMUST00000113686 Gm40460A0A1B0GR10 244 aa6,68□□□□□ -1,34
Tpm1-206ENSMUST00000113686 Gm7579A0A1B0GRJ4 243 aa6,68□□□□□ -1,34
Tpm1-206ENSMUST00000113686 Krtap5-5Q2TA51 241 aa6,68□□□□□ -1,34
Tpm1-206ENSMUST00000113686 Krtap5-4Q62220 223 aa6,68□□□□□ -1,34
Tpm1-206ENSMUST00000113686 Mt1P02802 61 aaKnown RBP6,66□□□□□ -1,34
Tpm1-206ENSMUST00000113686 Krtap19-4Q925H7 84 aa6,63□□□□□ -1,35
Tpm1-206ENSMUST00000113686 4933415A04RikQ9D443 101 aa6,63□□□□□ -1,35
Tpm1-206ENSMUST00000113686 Gm39115A0A1B0GSH7 232 aa6,6□□□□□ -1,35
Tpm1-206ENSMUST00000113686 DstQ91ZU6 7393 aaKnown RBP6,53□□□□□ -1,36
Tpm1-206ENSMUST00000113686 Sox16Q62247 57 aa6,49□□□□□ -1,37
Tpm1-206ENSMUST00000113686 Tnp1P10856 55 aa6,46□□□□□ -1,38
Tpm1-206ENSMUST00000113686 NebE9Q1W3 7152 aa6,43□□□□□ -1,38
Tpm1-206ENSMUST00000113686 Lce3cQ91V05 98 aa6,38□□□□□ -1,39
Tpm1-206ENSMUST00000113686 Gm3646F6S692 53 aa6,37□□□□□ -1,39
Tpm1-206ENSMUST00000113686 Krtap4-16Q91W93 202 aa6,29□□□□□ -1,4
Tpm1-206ENSMUST00000113686 Lce3dE9Q8V1 98 aa6,28□□□□□ -1,4
Tpm1-206ENSMUST00000113686 Gm45618A0A1B0GSA0 219 aa6,21□□□□□ -1,42
Tpm1-206ENSMUST00000113686 Gm40193A0A1B0GT39 78 aa6,17□□□□□ -1,42
Tpm1-206ENSMUST00000113686 Mt3P28184 68 aa6,16□□□□□ -1,42
Tpm1-206ENSMUST00000113686 AhnakE9Q616 5656 aaKnown RBP6,1□□□□□ -1,43
Tpm1-206ENSMUST00000113686 Lce3eF8VQJ0 98 aa6,07□□□□□ -1,44
Tpm1-206ENSMUST00000113686 Lce3fQ6PAI4 98 aa6,07□□□□□ -1,44
Tpm1-206ENSMUST00000113686 Sprr2fO70557 76 aa6,03□□□□□ -1,44
Tpm1-206ENSMUST00000113686 ObscnA2AAJ9 8891 aaKnown RBP5,98□□□□□ -1,45
Tpm1-206ENSMUST00000113686 A0A1Y7VLE6 161 aa5,91□□□□□ -1,46
Tpm1-206ENSMUST00000113686 Gm10100J3QK64 120 aa5,84□□□□□ -1,47
Tpm1-206ENSMUST00000113686 4933428G20RikQ9D3X4 101 aa5,81□□□□□ -1,48
Tpm1-206ENSMUST00000113686 Lce3aQ497I5 98 aa5,8□□□□□ -1,48
Tpm1-206ENSMUST00000113686 Sprr2dO70555 85 aa5,75□□□□□ -1,49
Tpm1-206ENSMUST00000113686 Gm10337F7DEP7 55 aa5,7□□□□□ -1,5
Tpm1-206ENSMUST00000113686 Pcp4P63054 62 aa5,43□□□□□ -1,54
Tpm1-206ENSMUST00000113686 Krtap31-2Q8CAY5 177 aa5,43□□□□□ -1,54
Tpm1-206ENSMUST00000113686 Sprr2eO70556 76 aa5,37□□□□□ -1,55
Tpm1-206ENSMUST00000113686 Gm10024A0A0A0MQA4 119 aa5,27□□□□□ -1,57
Tpm1-206ENSMUST00000113686 Mp68P56379 58 aa5,2□□□□□ -1,58
Tpm1-206ENSMUST00000113686 Krtap31-1Q9D644 177 aa5,15□□□□□ -1,59
Tpm1-206ENSMUST00000113686 Krtap28-13A0A087WQP5 138 aa5,1□□□□□ -1,59
Tpm1-206ENSMUST00000113686 A030005K14RikA0A1Y7VNY1 122 aa5,05□□□□□ -1,6
Tpm1-206ENSMUST00000113686 A0A1Y7VJ07 166 aa5,04□□□□□ -1,6
Tpm1-206ENSMUST00000113686 Gm10142J3KMP7 120 aa5,04□□□□□ -1,6
Tpm1-206ENSMUST00000113686 Gm20538F6Z9R1 75 aa5,03□□□□□ -1,6
Tpm1-206ENSMUST00000113686 Krtap28-10A0A1Y7VP58 119 aa4,98□□□□□ -1,61
Tpm1-206ENSMUST00000113686 Muc16A0A140LJ72 8478 aa4,96□□□□□ -1,62
Tpm1-206ENSMUST00000113686 Sprr2hO70559 108 aa4,94□□□□□ -1,62
Tpm1-206ENSMUST00000113686 Gm29735A0A1B0GT06 219 aa4,91□□□□□ -1,62
Tpm1-206ENSMUST00000113686 SvipQ3UZP4 77 aa4,76□□□□□ -1,65
Tpm1-206ENSMUST00000113686 1110025L11RikO09048 78 aa4,75□□□□□ -1,65
Tpm1-206ENSMUST00000113686 Krtap6-5Q925H3 78 aa4,75□□□□□ -1,65
Tpm1-206ENSMUST00000113686 A030014E15RikA0A1Y7VJV2 120 aa4,71□□□□□ -1,66
Tpm1-206ENSMUST00000113686 Gm11567Q9D141 195 aa4,6□□□□□ -1,67
Tpm1-206ENSMUST00000113686 Gm7544A0A1Y7VJ58 118 aa4,5□□□□□ -1,69
Tpm1-206ENSMUST00000113686 Gm10229O08631 77 aa4,26□□□□□ -1,73
Tpm1-206ENSMUST00000113686 A030003K21RikA0A1Y7VIM3 128 aa4,13□□□□□ -1,75
Tpm1-206ENSMUST00000113686 Krtap5-1Q64507 230 aa3,87□□□□□ -1,79
Tpm1-206ENSMUST00000113686 Krtap6-2O08884 159 aa3,83□□□□□ -1,8
Tpm1-206ENSMUST00000113686 Krtap21-1Q925H4 128 aa3,83□□□□□ -1,8
Tpm1-206ENSMUST00000113686 A0A286YCP9 139 aa3,79□□□□□ -1,8
Tpm1-206ENSMUST00000113686 Sprr2bO70554 98 aa3,77□□□□□ -1,81
Tpm1-206ENSMUST00000113686 Ndufaf8A2AMZ4 74 aa3,45□□□□□ -1,86
Tpm1-206ENSMUST00000113686 Gm6217A0A1Y7VJK9 128 aa3,36□□□□□ -1,87
Tpm1-206ENSMUST00000113686 Phgr1Q8K0G7 91 aa3,05□□□□□ -1,92
Tpm1-206ENSMUST00000113686 Gm4559A4IF42 199 aa2,85□□□□□ -1,95
Tpm1-206ENSMUST00000113686 Gm9112A2AI92 75 aa2,58□□□□□ -2
Retrieved 80 of 22,080 RNA–protein pairs in 10,1 ms