RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 4933428G20RikQ9D3X4 101 aa1.88□□□□□ -2.11
Hmgb1-203ENSMUST00000110505 Krtap8-1O08633 61 aa1.88□□□□□ -2.11
Hmgb1-203ENSMUST00000110505 Krtap20-2E9Q0A8 60 aa1.87□□□□□ -2.11
Hmgb1-203ENSMUST00000110505 Sprr2jO70561 109 aa1.87□□□□□ -2.11
Hmgb1-203ENSMUST00000110505 4930518I15RikQ3V2W7 57 aa1.87□□□□□ -2.11
Hmgb1-203ENSMUST00000110505 Sprr2gO70558 76 aa1.86□□□□□ -2.11
Hmgb1-203ENSMUST00000110505 Spink13Q3UTS8 97 aa1.86□□□□□ -2.11
Hmgb1-203ENSMUST00000110505 Prr15lQ8JZM2 100 aa1.85□□□□□ -2.11
Hmgb1-203ENSMUST00000110505 Lce3eF8VQJ0 98 aa1.84□□□□□ -2.11
Hmgb1-203ENSMUST00000110505 NrepQ07475 68 aa1.84□□□□□ -2.11
Hmgb1-203ENSMUST00000110505 Serp2Q6TAW2 65 aa1.84□□□□□ -2.11
Hmgb1-203ENSMUST00000110505 2310046K23RikA0A0A6YVW6 87 aa1.83□□□□□ -2.12
Hmgb1-203ENSMUST00000110505 Rbm3O89086 153 aaKnown RBP1.83□□□□□ -2.12
Hmgb1-203ENSMUST00000110505 Romo1P60603 79 aa1.83□□□□□ -2.12
Hmgb1-203ENSMUST00000110505 Cox7cP17665 63 aa1.83□□□□□ -2.12
Hmgb1-203ENSMUST00000110505 Gm37013Q8K491 104 aa1.83□□□□□ -2.12
Hmgb1-203ENSMUST00000110505 Tac4Q99N14 128 aa1.81□□□□□ -2.12
Hmgb1-203ENSMUST00000110505 Eppk1Q8R0W0 6548 aa1.81□□□□□ -2.12
Hmgb1-203ENSMUST00000110505 Smim13E9Q942 88 aa1.79□□□□□ -2.12
Hmgb1-203ENSMUST00000110505 Xcl1P47993 114 aa1.79□□□□□ -2.12
Hmgb1-203ENSMUST00000110505 Krtap22-2J3QNX6 67 aa1.78□□□□□ -2.12
Hmgb1-203ENSMUST00000110505 Gm10999F6Q4M4 69 aa1.77□□□□□ -2.13
Hmgb1-203ENSMUST00000110505 Acyp1P56376 99 aa1.77□□□□□ -2.13
Hmgb1-203ENSMUST00000110505 Spink8Q09TK9 105 aa1.77□□□□□ -2.13
Hmgb1-203ENSMUST00000110505 Spink7Q6IE32 76 aa1.77□□□□□ -2.13
Hmgb1-203ENSMUST00000110505 Krtap6-2O08884 159 aa1.75□□□□□ -2.13
Hmgb1-203ENSMUST00000110505 Defb1P56386 69 aa1.74□□□□□ -2.13
Hmgb1-203ENSMUST00000110505 Cdc42se1Q8BHL7 80 aa1.74□□□□□ -2.13
Hmgb1-203ENSMUST00000110505 SnurfQ9WU12 71 aa1.74□□□□□ -2.13
Hmgb1-203ENSMUST00000110505 Gm11639A0A1D5RLM8 5808 aa1.74□□□□□ -2.13
Hmgb1-203ENSMUST00000110505 Pde6gP09174 87 aa1.74□□□□□ -2.13
Hmgb1-203ENSMUST00000110505 CriptO70333 101 aa1.71□□□□□ -2.13
Hmgb1-203ENSMUST00000110505 Ndufc1Q9CQY9 76 aa1.71□□□□□ -2.13
Hmgb1-203ENSMUST00000110505 BC029722A0A0N4SW31 51 aa1.71□□□□□ -2.14
Hmgb1-203ENSMUST00000110505 Ormdl1Q921I0 153 aa1.71□□□□□ -2.14
Hmgb1-203ENSMUST00000110505 Macf1Q9QXZ0 7354 aaKnown RBP1.7□□□□□ -2.14
Hmgb1-203ENSMUST00000110505 B230307C23RikQ8BLB2 64 aa1.69□□□□□ -2.14
Hmgb1-203ENSMUST00000110505 A0A286YE49 62 aa1.69□□□□□ -2.14
Hmgb1-203ENSMUST00000110505 Atox1O08997 68 aaKnown RBP1.68□□□□□ -2.14
Hmgb1-203ENSMUST00000110505 Gpr98Q8VHN7 6298 aaKnown RBP1.68□□□□□ -2.14
Hmgb1-203ENSMUST00000110505 Gm10382Q3V0T5 144 aa1.66□□□□□ -2.14
Hmgb1-203ENSMUST00000110505 Gm17606F6ZL36 78 aa1.65□□□□□ -2.15
Hmgb1-203ENSMUST00000110505 Gm20537G3UYK7 97 aa1.65□□□□□ -2.15
Hmgb1-203ENSMUST00000110505 Muc19Q6PZE0 7524 aa1.65□□□□□ -2.15
Hmgb1-203ENSMUST00000110505 Gm21798J3QNU5 87 aa1.64□□□□□ -2.15
Hmgb1-203ENSMUST00000110505 Ndufb1P0DN34 57 aa1.64□□□□□ -2.15
Hmgb1-203ENSMUST00000110505 Sprr2iO70560 76 aa1.63□□□□□ -2.15
Hmgb1-203ENSMUST00000110505 Ubl5Q9EPV8 73 aa1.63□□□□□ -2.15
Hmgb1-203ENSMUST00000110505 Cox6b2Q80ZN9 88 aa1.61□□□□□ -2.15
Hmgb1-203ENSMUST00000110505 Gm9955Q8CEJ8 102 aa1.6□□□□□ -2.15
Hmgb1-203ENSMUST00000110505 SptssbQ925E8 76 aa1.6□□□□□ -2.15
Hmgb1-203ENSMUST00000110505 Krtap4-16Q91W93 202 aa1.58□□□□□ -2.16
Hmgb1-203ENSMUST00000110505 Sprr2a3Q4KL71 83 aa1.55□□□□□ -2.16
Hmgb1-203ENSMUST00000110505 Sprr2a1Q9CQK8 83 aa1.55□□□□□ -2.16
Hmgb1-203ENSMUST00000110505 Coa5Q99M07 74 aa1.54□□□□□ -2.16
Hmgb1-203ENSMUST00000110505 Syne1Q6ZWR6 8799 aa1.54□□□□□ -2.16
Hmgb1-203ENSMUST00000110505 NebE9Q1W3 7152 aa1.53□□□□□ -2.16
Hmgb1-203ENSMUST00000110505 Lce3bQ9CQM7 98 aa1.52□□□□□ -2.17
Hmgb1-203ENSMUST00000110505 Krtap19-9bQ99NG9 58 aa1.51□□□□□ -2.17
Hmgb1-203ENSMUST00000110505 DstQ91ZU6 7393 aaKnown RBP1.5□□□□□ -2.17
Hmgb1-203ENSMUST00000110505 Uqcr11Q9CPX8 56 aa1.5□□□□□ -2.17
Hmgb1-203ENSMUST00000110505 Krtap19-4Q925H7 84 aa1.46□□□□□ -2.18
Hmgb1-203ENSMUST00000110505 Gm20661K7N787 53 aa1.42□□□□□ -2.18
Hmgb1-203ENSMUST00000110505 Sprr2fO70557 76 aa1.41□□□□□ -2.18
Hmgb1-203ENSMUST00000110505 Gm17402F6Z0L5 76 aa1.4□□□□□ -2.18
Hmgb1-203ENSMUST00000110505 1110025L11RikO09048 78 aa1.4□□□□□ -2.19
Hmgb1-203ENSMUST00000110505 Mt1P02802 61 aaKnown RBP1.39□□□□□ -2.19
Hmgb1-203ENSMUST00000110505 Gm10024A0A0A0MQA4 119 aa1.38□□□□□ -2.19
Hmgb1-203ENSMUST00000110505 Gm11938Q9D3H4 131 aa1.38□□□□□ -2.19
Hmgb1-203ENSMUST00000110505 Krtap21-1Q925H4 128 aa1.37□□□□□ -2.19
Hmgb1-203ENSMUST00000110505 AhnakE9Q616 5656 aaKnown RBP1.37□□□□□ -2.19
Hmgb1-203ENSMUST00000110505 Gm3880A0A1B0GSB3 72 aa1.24□□□□□ -2.21
Hmgb1-203ENSMUST00000110505 ObscnA2AAJ9 8891 aaKnown RBP1.22□□□□□ -2.21
Hmgb1-203ENSMUST00000110505 Sprr2eO70556 76 aa1.15□□□□□ -2.22
Hmgb1-203ENSMUST00000110505 Sprr2hO70559 108 aa1.14□□□□□ -2.23
Hmgb1-203ENSMUST00000110505 Muc16A0A140LJ72 8478 aa1.12□□□□□ -2.23
Hmgb1-203ENSMUST00000110505 Tnp1P10856 55 aa1.05□□□□□ -2.24
Hmgb1-203ENSMUST00000110505 Sprr2dO70555 85 aa1□□□□□ -2.25
Hmgb1-203ENSMUST00000110505 Sprr2bO70554 98 aa0.89□□□□□ -2.27
Hmgb1-203ENSMUST00000110505 Phgr1Q8K0G7 91 aa0.62□□□□□ -2.31
Retrieved 80 of 22,080 RNA–protein pairs in 7.1 ms