RNA–Protein interactions for RNA: ENSMUST00000103643.3

Trav8-1-201, Transcript of T cell receptor alpha variable 8-1 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav8-1, Length 328 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1-201ENSMUST00000103643 Wfdc12Q9JHY3 85 aa1.38□□□□□ -2.19
Trav8-1-201ENSMUST00000103643 ApobE9Q414 4505 aa1.37□□□□□ -2.19
Trav8-1-201ENSMUST00000103643 Rnf213E9Q555 5152 aaKnown RBP1.36□□□□□ -2.19
Trav8-1-201ENSMUST00000103643 Lrp1bQ9JI18 4599 aa1.35□□□□□ -2.19
Trav8-1-201ENSMUST00000103643 Lrp1Q91ZX7 4545 aaKnown RBP1.35□□□□□ -2.19
Trav8-1-201ENSMUST00000103643 Gm11596B1AQB0 205 aa1.35□□□□□ -2.19
Trav8-1-201ENSMUST00000103643 Sprr2kO70562 68 aa1.35□□□□□ -2.19
Trav8-1-201ENSMUST00000103643 Fat2Q5F226 4351 aa1.34□□□□□ -2.19
Trav8-1-201ENSMUST00000103643 Krtap19-5O08632 62 aa1.34□□□□□ -2.19
Trav8-1-201ENSMUST00000103643 Tomm7Q9D173 55 aa1.34□□□□□ -2.19
Trav8-1-201ENSMUST00000103643 Defb1P56386 69 aa1.33□□□□□ -2.2
Trav8-1-201ENSMUST00000103643 ZanO88799 5376 aa1.33□□□□□ -2.2
Trav8-1-201ENSMUST00000103643 Fsip2A2ARZ3 6995 aa1.31□□□□□ -2.2
Trav8-1-201ENSMUST00000103643 Gm10061D3Z714 54 aa1.3□□□□□ -2.2
Trav8-1-201ENSMUST00000103643 Gm10139O88245 57 aa1.3□□□□□ -2.2
Trav8-1-201ENSMUST00000103643 Crct1Q6PAI5 102 aa1.3□□□□□ -2.2
Trav8-1-201ENSMUST00000103643 SspoQ8CG65 4998 aa1.28□□□□□ -2.2
Trav8-1-201ENSMUST00000103643 Gm4559A4IF42 199 aa1.28□□□□□ -2.2
Trav8-1-201ENSMUST00000103643 Krtap4-6Q3V4B7 195 aa1.28□□□□□ -2.2
Trav8-1-201ENSMUST00000103643 Muc5bE9Q5I3 4800 aa1.28□□□□□ -2.2
Trav8-1-201ENSMUST00000103643 Hectd4E9Q2E4 4418 aa1.27□□□□□ -2.21
Trav8-1-201ENSMUST00000103643 Mdn1A2ANY6 5589 aaKnown RBP1.26□□□□□ -2.21
Trav8-1-201ENSMUST00000103643 Lce3dE9Q8V1 98 aa1.26□□□□□ -2.21
Trav8-1-201ENSMUST00000103643 Lce3aQ497I5 98 aa1.26□□□□□ -2.21
Trav8-1-201ENSMUST00000103643 Gm7579A0A1B0GRJ4 243 aa1.25□□□□□ -2.21
Trav8-1-201ENSMUST00000103643 Gm11564A2A4L9 201 aa1.23□□□□□ -2.21
Trav8-1-201ENSMUST00000103643 Krtap19-4Q925H7 84 aa1.23□□□□□ -2.21
Trav8-1-201ENSMUST00000103643 Krtap5-2Q9D5Z7 189 aa1.22□□□□□ -2.21
Trav8-1-201ENSMUST00000103643 Sprr2eO70556 76 aa1.21□□□□□ -2.22
Trav8-1-201ENSMUST00000103643 Krtap5-1Q64507 230 aa1.21□□□□□ -2.22
Trav8-1-201ENSMUST00000103643 Krtap6-3A0A087WQL6 57 aa1.19□□□□□ -2.22
Trav8-1-201ENSMUST00000103643 Eppk1Q8R0W0 6548 aa1.18□□□□□ -2.22
Trav8-1-201ENSMUST00000103643 Sprr2gO70558 76 aa1.17□□□□□ -2.22
Trav8-1-201ENSMUST00000103643 Gm4553A0A1B0GSA9 284 aa1.16□□□□□ -2.22
Trav8-1-201ENSMUST00000103643 Defb39Q70KL3 74 aa1.15□□□□□ -2.23
Trav8-1-201ENSMUST00000103643 Krtap16-3Q8C1I6 86 aa1.15□□□□□ -2.23
Trav8-1-201ENSMUST00000103643 Gpr15lA0A0B4J1N3 78 aa1.14□□□□□ -2.23
Trav8-1-201ENSMUST00000103643 Mt4P47945 62 aa1.14□□□□□ -2.23
Trav8-1-201ENSMUST00000103643 Gm11639A0A1D5RLM8 5808 aa1.14□□□□□ -2.23
Trav8-1-201ENSMUST00000103643 Lce3fQ6PAI4 98 aa1.13□□□□□ -2.23
Trav8-1-201ENSMUST00000103643 Lce3cQ91V05 98 aa1.13□□□□□ -2.23
Trav8-1-201ENSMUST00000103643 Gm10229O08631 77 aa1.12□□□□□ -2.23
Trav8-1-201ENSMUST00000103643 Gpr98Q8VHN7 6298 aaKnown RBP1.12□□□□□ -2.23
Trav8-1-201ENSMUST00000103643 Macf1Q9QXZ0 7354 aaKnown RBP1.11□□□□□ -2.23
Trav8-1-201ENSMUST00000103643 HrnrQ8VHD8 2496 aa1.1□□□□□ -2.23
Trav8-1-201ENSMUST00000103643 Krtap20-2E9Q0A8 60 aa1.1□□□□□ -2.23
Trav8-1-201ENSMUST00000103643 Sprr2dO70555 85 aa1.1□□□□□ -2.23
Trav8-1-201ENSMUST00000103643 Sprr2hO70559 108 aa1.09□□□□□ -2.23
Trav8-1-201ENSMUST00000103643 BC029722A0A0N4SW31 51 aa1.08□□□□□ -2.24
Trav8-1-201ENSMUST00000103643 Gm11938Q9D3H4 131 aa1.08□□□□□ -2.24
Trav8-1-201ENSMUST00000103643 Rps29P62274 56 aa1.04□□□□□ -2.24
Trav8-1-201ENSMUST00000103643 Krtap19-1Q925H2 87 aa1.03□□□□□ -2.24
Trav8-1-201ENSMUST00000103643 Muc19Q6PZE0 7524 aa1.01□□□□□ -2.25
Trav8-1-201ENSMUST00000103643 DstQ91ZU6 7393 aaKnown RBP1□□□□□ -2.25
Trav8-1-201ENSMUST00000103643 NebE9Q1W3 7152 aa1□□□□□ -2.25
Trav8-1-201ENSMUST00000103643 Krtap6-5Q925H3 78 aa0.99□□□□□ -2.25
Trav8-1-201ENSMUST00000103643 Krtap19-2Q925I0 141 aa0.99□□□□□ -2.25
Trav8-1-201ENSMUST00000103643 Gm6358A0A087WPH4 74 aa0.97□□□□□ -2.25
Trav8-1-201ENSMUST00000103643 Lce3eF8VQJ0 98 aa0.96□□□□□ -2.26
Trav8-1-201ENSMUST00000103643 Kmt2dQ6PDK2 5588 aa0.96□□□□□ -2.26
Trav8-1-201ENSMUST00000103643 Lce3bQ9CQM7 98 aa0.92□□□□□ -2.26
Trav8-1-201ENSMUST00000103643 Hmcn1D3YXG0 5634 aa0.91□□□□□ -2.26
Trav8-1-201ENSMUST00000103643 Krtap8-1O08633 61 aa0.91□□□□□ -2.26
Trav8-1-201ENSMUST00000103643 Krtap4-16Q91W93 202 aa0.87□□□□□ -2.27
Trav8-1-201ENSMUST00000103643 AhnakE9Q616 5656 aaKnown RBP0.87□□□□□ -2.27
Trav8-1-201ENSMUST00000103643 Mt2P02798 61 aa0.86□□□□□ -2.27
Trav8-1-201ENSMUST00000103643 Krtap5-5Q2TA51 241 aa0.85□□□□□ -2.27
Trav8-1-201ENSMUST00000103643 Krtap19-9aF8WH65 55 aa0.83□□□□□ -2.28
Trav8-1-201ENSMUST00000103643 Krtap6-2O08884 159 aa0.83□□□□□ -2.28
Trav8-1-201ENSMUST00000103643 Gm40460A0A1B0GR10 244 aa0.82□□□□□ -2.28
Trav8-1-201ENSMUST00000103643 Krtap22-2J3QNX6 67 aa0.82□□□□□ -2.28
Trav8-1-201ENSMUST00000103643 Krtap19-9bQ99NG9 58 aa0.82□□□□□ -2.28
Trav8-1-201ENSMUST00000103643 Sprr2bO70554 98 aa0.8□□□□□ -2.28
Trav8-1-201ENSMUST00000103643 Krtap21-1Q925H4 128 aa0.78□□□□□ -2.28
Trav8-1-201ENSMUST00000103643 1110025L11RikO09048 78 aa0.77□□□□□ -2.29
Trav8-1-201ENSMUST00000103643 Syne1Q6ZWR6 8799 aa0.74□□□□□ -2.29
Trav8-1-201ENSMUST00000103643 ObscnA2AAJ9 8891 aaKnown RBP0.66□□□□□ -2.3
Trav8-1-201ENSMUST00000103643 Mt1P02802 61 aaKnown RBP0.62□□□□□ -2.31
Trav8-1-201ENSMUST00000103643 Phgr1Q8K0G7 91 aa0.59□□□□□ -2.31
Trav8-1-201ENSMUST00000103643 Muc16A0A140LJ72 8478 aa0.58□□□□□ -2.32
Retrieved 80 of 22,080 RNA–protein pairs in 75.3 ms