RNA–Protein interactions for RNA: ENSMUST00000012627.4

Rpa3-201, Transcript of Replication protein A 14 kDa subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rpa3, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3-201ENSMUST00000012627 Gm17402F6Z0L5 76 aa4.01□□□□□ -1.77
Rpa3-201ENSMUST00000012627 Prm1P02319 51 aa4.01□□□□□ -1.77
Rpa3-201ENSMUST00000012627 Gm3880A0A1B0GSB3 72 aa3.99□□□□□ -1.77
Rpa3-201ENSMUST00000012627 Ush2AQ2QI47 5193 aa3.98□□□□□ -1.77
Rpa3-201ENSMUST00000012627 Krtap19-3Q925H6 87 aa3.98□□□□□ -1.77
Rpa3-201ENSMUST00000012627 Lce3fQ6PAI4 98 aa3.95□□□□□ -1.78
Rpa3-201ENSMUST00000012627 Lce3cQ91V05 98 aa3.95□□□□□ -1.78
Rpa3-201ENSMUST00000012627 Gm9789Q8BIG3 52 aa3.93□□□□□ -1.78
Rpa3-201ENSMUST00000012627 Gm19426M0QWC7 77 aa3.92□□□□□ -1.78
Rpa3-201ENSMUST00000012627 Hmcn2A2AJ76 5100 aa3.91□□□□□ -1.78
Rpa3-201ENSMUST00000012627 Gm12216A0A1W2P827 62 aa3.9□□□□□ -1.79
Rpa3-201ENSMUST00000012627 CriptO70333 101 aa3.9□□□□□ -1.79
Rpa3-201ENSMUST00000012627 Romo1P60603 79 aa3.89□□□□□ -1.79
Rpa3-201ENSMUST00000012627 Krtap1-4Q3V2D6 188 aa3.86□□□□□ -1.79
Rpa3-201ENSMUST00000012627 Sprr2a3Q4KL71 83 aa3.85□□□□□ -1.79
Rpa3-201ENSMUST00000012627 Sprr2a1Q9CQK8 83 aa3.85□□□□□ -1.79
Rpa3-201ENSMUST00000012627 Spink7Q6IE32 76 aa3.81□□□□□ -1.8
Rpa3-201ENSMUST00000012627 Rnf213E9Q555 5152 aaKnown RBP3.76□□□□□ -1.81
Rpa3-201ENSMUST00000012627 Kmt2dQ6PDK2 5588 aa3.75□□□□□ -1.81
Rpa3-201ENSMUST00000012627 ZanO88799 5376 aa3.75□□□□□ -1.81
Rpa3-201ENSMUST00000012627 Gm40460A0A1B0GR10 244 aa3.73□□□□□ -1.81
Rpa3-201ENSMUST00000012627 Fat4Q2PZL6 4981 aa3.73□□□□□ -1.81
Rpa3-201ENSMUST00000012627 Gm10229O08631 77 aa3.7□□□□□ -1.82
Rpa3-201ENSMUST00000012627 Krtap19-9aF8WH65 55 aa3.68□□□□□ -1.82
Rpa3-201ENSMUST00000012627 Syne2Q6ZWQ0 6874 aaKnown RBP3.67□□□□□ -1.82
Rpa3-201ENSMUST00000012627 SspoQ8CG65 4998 aa3.67□□□□□ -1.82
Rpa3-201ENSMUST00000012627 Gm40193A0A1B0GT39 78 aa3.61□□□□□ -1.83
Rpa3-201ENSMUST00000012627 Camk2n1Q6QWF9 78 aa3.61□□□□□ -1.83
Rpa3-201ENSMUST00000012627 Krtap19-2Q925I0 141 aa3.54□□□□□ -1.84
Rpa3-201ENSMUST00000012627 Krtap6-5Q925H3 78 aa3.53□□□□□ -1.84
Rpa3-201ENSMUST00000012627 Gm10061D3Z714 54 aa3.49□□□□□ -1.85
Rpa3-201ENSMUST00000012627 Mp68P56379 58 aa3.46□□□□□ -1.86
Rpa3-201ENSMUST00000012627 Krtap8-1O08633 61 aa3.44□□□□□ -1.86
Rpa3-201ENSMUST00000012627 Muc5bE9Q5I3 4800 aa3.41□□□□□ -1.86
Rpa3-201ENSMUST00000012627 Krtap19-9bQ99NG9 58 aa3.4□□□□□ -1.87
Rpa3-201ENSMUST00000012627 Lce3eF8VQJ0 98 aa3.36□□□□□ -1.87
Rpa3-201ENSMUST00000012627 Tnp1P10856 55 aa3.36□□□□□ -1.87
Rpa3-201ENSMUST00000012627 Gm6358A0A087WPH4 74 aa3.33□□□□□ -1.88
Rpa3-201ENSMUST00000012627 Gm20538F6Z9R1 75 aa3.29□□□□□ -1.88
Rpa3-201ENSMUST00000012627 Mt2P02798 61 aa3.28□□□□□ -1.88
Rpa3-201ENSMUST00000012627 2310046K23RikA0A0A6YVW6 87 aa3.22□□□□□ -1.89
Rpa3-201ENSMUST00000012627 Krtap22-2J3QNX6 67 aa3.12□□□□□ -1.91
Rpa3-201ENSMUST00000012627 Mdn1A2ANY6 5589 aaKnown RBP3.11□□□□□ -1.91
Rpa3-201ENSMUST00000012627 Krtap6-3A0A087WQL6 57 aa3.11□□□□□ -1.91
Rpa3-201ENSMUST00000012627 Ndufaf8A2AMZ4 74 aa3.1□□□□□ -1.91
Rpa3-201ENSMUST00000012627 Fsip2A2ARZ3 6995 aa3.09□□□□□ -1.91
Rpa3-201ENSMUST00000012627 Mt4P47945 62 aa3.02□□□□□ -1.93
Rpa3-201ENSMUST00000012627 Krtap6-2O08884 159 aa2.93□□□□□ -1.94
Rpa3-201ENSMUST00000012627 Gm11938Q9D3H4 131 aa2.87□□□□□ -1.95
Rpa3-201ENSMUST00000012627 Sprr2dO70555 85 aa2.86□□□□□ -1.95
Rpa3-201ENSMUST00000012627 Sprr2gO70558 76 aa2.86□□□□□ -1.95
Rpa3-201ENSMUST00000012627 Sprr2kO70562 68 aa2.86□□□□□ -1.95
Rpa3-201ENSMUST00000012627 Krtap20-2E9Q0A8 60 aa2.83□□□□□ -1.96
Rpa3-201ENSMUST00000012627 Eppk1Q8R0W0 6548 aa2.8□□□□□ -1.96
Rpa3-201ENSMUST00000012627 4933428G20RikQ9D3X4 101 aa2.79□□□□□ -1.96
Rpa3-201ENSMUST00000012627 Gm11639A0A1D5RLM8 5808 aa2.77□□□□□ -1.97
Rpa3-201ENSMUST00000012627 Hmcn1D3YXG0 5634 aa2.76□□□□□ -1.97
Rpa3-201ENSMUST00000012627 Krtap4-16Q91W93 202 aa2.74□□□□□ -1.97
Rpa3-201ENSMUST00000012627 Gpr98Q8VHN7 6298 aaKnown RBP2.74□□□□□ -1.97
Rpa3-201ENSMUST00000012627 Krtap19-4Q925H7 84 aa2.73□□□□□ -1.97
Rpa3-201ENSMUST00000012627 Macf1Q9QXZ0 7354 aaKnown RBP2.71□□□□□ -1.98
Rpa3-201ENSMUST00000012627 Gm9112A2AI92 75 aa2.71□□□□□ -1.98
Rpa3-201ENSMUST00000012627 Lce3bQ9CQM7 98 aa2.7□□□□□ -1.98
Rpa3-201ENSMUST00000012627 Syne1Q6ZWR6 8799 aa2.63□□□□□ -1.99
Rpa3-201ENSMUST00000012627 Muc19Q6PZE0 7524 aa2.57□□□□□ -2
Rpa3-201ENSMUST00000012627 1110025L11RikO09048 78 aa2.55□□□□□ -2
Rpa3-201ENSMUST00000012627 Sprr2iO70560 76 aa2.54□□□□□ -2
Rpa3-201ENSMUST00000012627 Krtap21-1Q925H4 128 aa2.52□□□□□ -2.01
Rpa3-201ENSMUST00000012627 Mt1P02802 61 aaKnown RBP2.51□□□□□ -2.01
Rpa3-201ENSMUST00000012627 Sprr2hO70559 108 aa2.46□□□□□ -2.02
Rpa3-201ENSMUST00000012627 ObscnA2AAJ9 8891 aaKnown RBP2.44□□□□□ -2.02
Rpa3-201ENSMUST00000012627 DstQ91ZU6 7393 aaKnown RBP2.42□□□□□ -2.02
Rpa3-201ENSMUST00000012627 Sprr2eO70556 76 aa2.38□□□□□ -2.03
Rpa3-201ENSMUST00000012627 NebE9Q1W3 7152 aa2.34□□□□□ -2.03
Rpa3-201ENSMUST00000012627 Sprr2fO70557 76 aa2.23□□□□□ -2.05
Rpa3-201ENSMUST00000012627 AhnakE9Q616 5656 aaKnown RBP2.14□□□□□ -2.07
Rpa3-201ENSMUST00000012627 Gm10024A0A0A0MQA4 119 aa2.1□□□□□ -2.07
Rpa3-201ENSMUST00000012627 Sprr2bO70554 98 aa1.78□□□□□ -2.12
Rpa3-201ENSMUST00000012627 Muc16A0A140LJ72 8478 aa1.69□□□□□ -2.14
Rpa3-201ENSMUST00000012627 Phgr1Q8K0G7 91 aa1.45□□□□□ -2.18
Retrieved 80 of 22,080 RNA–protein pairs in 8.6 ms