RNA–Protein interactions for RNA: ENSMUST00000190193.7

Col6a5-203, Transcript of Collagen alpha-5(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a5, Length 9,289 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-203ENSMUST00000190193 Gm6358A0A087WPH4 74 aa4.15□□□□□ -1.74
Col6a5-203ENSMUST00000190193 Dnah14A0A140LIJ4 4489 aa4.13□□□□□ -1.75
Col6a5-203ENSMUST00000190193 Dync2h1Q45VK7 4306 aa4.1□□□□□ -1.75
Col6a5-203ENSMUST00000190193 Krtap1-4Q3V2D6 188 aa4.09□□□□□ -1.75
Col6a5-203ENSMUST00000190193 Dnah10D3YYQ8 4591 aa4.09□□□□□ -1.75
Col6a5-203ENSMUST00000190193 Krtap12-1Q9Z287 130 aa4.06□□□□□ -1.76
Col6a5-203ENSMUST00000190193 Krtap8-1O08633 61 aa4.03□□□□□ -1.76
Col6a5-203ENSMUST00000190193 Hectd4E9Q2E4 4418 aa4.02□□□□□ -1.77
Col6a5-203ENSMUST00000190193 Sprr2kO70562 68 aa4.02□□□□□ -1.77
Col6a5-203ENSMUST00000190193 Gm18596A0A1W2P860 280 aa3.97□□□□□ -1.77
Col6a5-203ENSMUST00000190193 Pkhd1E9PZ36 4059 aa3.95□□□□□ -1.78
Col6a5-203ENSMUST00000190193 Gm19402J3QJV4 266 aa3.94□□□□□ -1.78
Col6a5-203ENSMUST00000190193 Vps13dB1ART2 4390 aa3.93□□□□□ -1.78
Col6a5-203ENSMUST00000190193 Sprr2gO70558 76 aa3.89□□□□□ -1.79
Col6a5-203ENSMUST00000190193 Pkd1O08852 4293 aa3.89□□□□□ -1.79
Col6a5-203ENSMUST00000190193 2310046K23RikA0A0A6YVW6 87 aa3.88□□□□□ -1.79
Col6a5-203ENSMUST00000190193 Dnah11E9Q7N9 4488 aa3.86□□□□□ -1.79
Col6a5-203ENSMUST00000190193 Dnah17Q69Z23 4481 aa3.84□□□□□ -1.8
Col6a5-203ENSMUST00000190193 Gm10100J3QK64 120 aa3.82□□□□□ -1.8
Col6a5-203ENSMUST00000190193 Dnah2P0C6F1 4456 aa3.8□□□□□ -1.8
Col6a5-203ENSMUST00000190193 Stard9Q80TF6 4561 aa3.79□□□□□ -1.8
Col6a5-203ENSMUST00000190193 Pkhd1l1Q80ZA4 4249 aa3.76□□□□□ -1.81
Col6a5-203ENSMUST00000190193 Dnah5Q8VHE6 4621 aa3.74□□□□□ -1.81
Col6a5-203ENSMUST00000190193 Gm10142J3KMP7 120 aa3.74□□□□□ -1.81
Col6a5-203ENSMUST00000190193 Dnah9B1AR51 4484 aa3.73□□□□□ -1.81
Col6a5-203ENSMUST00000190193 Gm10272F7CZ33 110 aa3.72□□□□□ -1.81
Col6a5-203ENSMUST00000190193 LorP18165 486 aa3.71□□□□□ -1.82
Col6a5-203ENSMUST00000190193 Lce3bQ9CQM7 98 aa3.71□□□□□ -1.82
Col6a5-203ENSMUST00000190193 Lce3cQ91V05 98 aa3.65□□□□□ -1.82
Col6a5-203ENSMUST00000190193 ApobE9Q414 4505 aa3.62□□□□□ -1.83
Col6a5-203ENSMUST00000190193 Lce3eF8VQJ0 98 aa3.61□□□□□ -1.83
Col6a5-203ENSMUST00000190193 Lce3fQ6PAI4 98 aa3.61□□□□□ -1.83
Col6a5-203ENSMUST00000190193 PlecQ9QXS1 4691 aaKnown RBP3.59□□□□□ -1.83
Col6a5-203ENSMUST00000190193 Fat2Q5F226 4351 aa3.59□□□□□ -1.84
Col6a5-203ENSMUST00000190193 Lce3dE9Q8V1 98 aa3.58□□□□□ -1.84
Col6a5-203ENSMUST00000190193 Krtap16-3Q8C1I6 86 aa3.54□□□□□ -1.84
Col6a5-203ENSMUST00000190193 Lce3aQ497I5 98 aa3.51□□□□□ -1.85
Col6a5-203ENSMUST00000190193 Mycbp2Q7TPH6 4711 aa3.49□□□□□ -1.85
Col6a5-203ENSMUST00000190193 Krtap19-3Q925H6 87 aa3.48□□□□□ -1.85
Col6a5-203ENSMUST00000190193 Dync1h1Q9JHU4 4644 aaKnown RBP3.48□□□□□ -1.85
Col6a5-203ENSMUST00000190193 Sprr2iO70560 76 aa3.47□□□□□ -1.85
Col6a5-203ENSMUST00000190193 Krtap9-5A2A5X3 358 aa3.43□□□□□ -1.86
Col6a5-203ENSMUST00000190193 Lrp1bQ9JI18 4599 aa3.43□□□□□ -1.86
Col6a5-203ENSMUST00000190193 Krtap22-2J3QNX6 67 aa3.42□□□□□ -1.86
Col6a5-203ENSMUST00000190193 Mt2P02798 61 aa3.41□□□□□ -1.86
Col6a5-203ENSMUST00000190193 Gm10024A0A0A0MQA4 119 aa3.39□□□□□ -1.87
Col6a5-203ENSMUST00000190193 Lrp1Q91ZX7 4545 aaKnown RBP3.38□□□□□ -1.87
Col6a5-203ENSMUST00000190193 Krtap19-4Q925H7 84 aa3.38□□□□□ -1.87
Col6a5-203ENSMUST00000190193 Sprr2fO70557 76 aa3.37□□□□□ -1.87
Col6a5-203ENSMUST00000190193 Krtap9-3Q3V2C1 136 aa3.37□□□□□ -1.87
Col6a5-203ENSMUST00000190193 Krtap19-1Q925H2 87 aa3.37□□□□□ -1.87
Col6a5-203ENSMUST00000190193 Lce1mQ9CR91 182 aa3.35□□□□□ -1.87
Col6a5-203ENSMUST00000190193 Dnah8Q91XQ0 4731 aa3.33□□□□□ -1.88
Col6a5-203ENSMUST00000190193 SacsQ9JLC8 4582 aa3.33□□□□□ -1.88
Col6a5-203ENSMUST00000190193 Fat3Q8BNA6 4555 aa3.27□□□□□ -1.89
Col6a5-203ENSMUST00000190193 Lce1jD3YUU5 139 aa3.25□□□□□ -1.89
Col6a5-203ENSMUST00000190193 Lce1gQ9D195 139 aa3.25□□□□□ -1.89
Col6a5-203ENSMUST00000190193 Lce1iQ9D6P5 149 aa3.25□□□□□ -1.89
Col6a5-203ENSMUST00000190193 Lce1hQ9D6R3 140 aa3.25□□□□□ -1.89
Col6a5-203ENSMUST00000190193 Krtap19-2Q925I0 141 aa3.23□□□□□ -1.89
Col6a5-203ENSMUST00000190193 Fat1A0A1L1SQU7 4645 aa3.23□□□□□ -1.89
Col6a5-203ENSMUST00000190193 Gm38119A0A0A6YX29 146 aa3.22□□□□□ -1.89
Col6a5-203ENSMUST00000190193 Sprr2hO70559 108 aa3.22□□□□□ -1.89
Col6a5-203ENSMUST00000190193 Sprr2eO70556 76 aa3.21□□□□□ -1.9
Col6a5-203ENSMUST00000190193 Prm1P02319 51 aa3.19□□□□□ -1.9
Col6a5-203ENSMUST00000190193 Ryr1E9PZQ0 5035 aa3.19□□□□□ -1.9
Col6a5-203ENSMUST00000190193 Lce1bQ9D149 137 aa3.18□□□□□ -1.9
Col6a5-203ENSMUST00000190193 Lce1eQ9D139 143 aa3.17□□□□□ -1.9
Col6a5-203ENSMUST00000190193 Lce1fB9EJP6 147 aa3.15□□□□□ -1.91
Col6a5-203ENSMUST00000190193 Lce1cQ9D1C5 147 aa3.15□□□□□ -1.91
Col6a5-203ENSMUST00000190193 Lce1lQ9D1G7 135 aa3.15□□□□□ -1.91
Col6a5-203ENSMUST00000190193 Lce1dQ9D731 133 aa3.15□□□□□ -1.91
Col6a5-203ENSMUST00000190193 Sprr2dO70555 85 aa3.14□□□□□ -1.91
Col6a5-203ENSMUST00000190193 Krtap31-2Q8CAY5 177 aa3.13□□□□□ -1.91
Col6a5-203ENSMUST00000190193 Krtap31-1Q9D644 177 aa3.12□□□□□ -1.91
Col6a5-203ENSMUST00000190193 Krtap1-3A2A588 173 aa3.05□□□□□ -1.92
Col6a5-203ENSMUST00000190193 Gm11938Q9D3H4 131 aa3.04□□□□□ -1.92
Col6a5-203ENSMUST00000190193 Gm9789Q8BIG3 52 aa3.03□□□□□ -1.92
Col6a5-203ENSMUST00000190193 Gm7735D3YX18 52 aa2.98□□□□□ -1.93
Col6a5-203ENSMUST00000190193 Kmt2cQ8BRH4 4903 aa2.95□□□□□ -1.94
Col6a5-203ENSMUST00000190193 Gm11562A0PK51 136 aa2.92□□□□□ -1.94
Col6a5-203ENSMUST00000190193 Ryr2E9Q401 4966 aaKnown RBP2.9□□□□□ -1.95
Col6a5-203ENSMUST00000190193 Gm10061D3Z714 54 aa2.9□□□□□ -1.95
Col6a5-203ENSMUST00000190193 Lce1a2Q9D1K4 149 aa2.88□□□□□ -1.95
Col6a5-203ENSMUST00000190193 ZanO88799 5376 aa2.86□□□□□ -1.95
Col6a5-203ENSMUST00000190193 Lrp2A2ARV4 4660 aa2.86□□□□□ -1.95
Col6a5-203ENSMUST00000190193 Gm11569B1AQB1 180 aa2.84□□□□□ -1.95
Col6a5-203ENSMUST00000190193 Mt4P47945 62 aa2.81□□□□□ -1.96
Col6a5-203ENSMUST00000190193 PcloQ9QYX7 5068 aa2.78□□□□□ -1.96
Col6a5-203ENSMUST00000190193 Krtap4-2B1AQ85 167 aa2.73□□□□□ -1.97
Col6a5-203ENSMUST00000190193 Krtap4-16Q91W93 202 aa2.73□□□□□ -1.97
Col6a5-203ENSMUST00000190193 Dnhd1D3Z2X2 4750 aa2.73□□□□□ -1.97
Col6a5-203ENSMUST00000190193 Birc6O88738 4882 aa2.72□□□□□ -1.97
Col6a5-203ENSMUST00000190193 Ryr3A2AGL3 4863 aa2.71□□□□□ -1.98
Col6a5-203ENSMUST00000190193 Mt3P28184 68 aa2.69□□□□□ -1.98
Col6a5-203ENSMUST00000190193 Krtap4-6Q3V4B7 195 aa2.66□□□□□ -1.98
Col6a5-203ENSMUST00000190193 Sprr2bO70554 98 aa2.64□□□□□ -1.99
Col6a5-203ENSMUST00000190193 Mt1P02802 61 aaKnown RBP2.6□□□□□ -1.99
Col6a5-203ENSMUST00000190193 Herc2Q4U2R1 4836 aa2.6□□□□□ -1.99
Col6a5-203ENSMUST00000190193 Krtap4-7Q9D732 168 aa2.58□□□□□ -2
Retrieved 100 of 22,080 RNA–protein pairs in 68 ms