RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 Lce1mQ9CR91 182 aa6.79□□□□□ -1.32
Shroom3-201ENSMUST00000113051 Xirp2Q4U4S6 3784 aa6.78□□□□□ -1.32
Shroom3-201ENSMUST00000113051 Vps13dB1ART2 4390 aa6.72□□□□□ -1.33
Shroom3-201ENSMUST00000113051 PlecQ9QXS1 4691 aaKnown RBP6.68□□□□□ -1.34
Shroom3-201ENSMUST00000113051 Stard9Q80TF6 4561 aa6.66□□□□□ -1.34
Shroom3-201ENSMUST00000113051 Dnah11E9Q7N9 4488 aa6.66□□□□□ -1.34
Shroom3-201ENSMUST00000113051 Lce3bQ9CQM7 98 aa6.64□□□□□ -1.35
Shroom3-201ENSMUST00000113051 Dnah17Q69Z23 4481 aa6.62□□□□□ -1.35
Shroom3-201ENSMUST00000113051 Krtap9-5A2A5X3 358 aa6.57□□□□□ -1.36
Shroom3-201ENSMUST00000113051 Dnah2P0C6F1 4456 aa6.56□□□□□ -1.36
Shroom3-201ENSMUST00000113051 ApobE9Q414 4505 aa6.56□□□□□ -1.36
Shroom3-201ENSMUST00000113051 2310046K23RikA0A0A6YVW6 87 aa6.56□□□□□ -1.36
Shroom3-201ENSMUST00000113051 Gm38119A0A0A6YX29 146 aa6.54□□□□□ -1.36
Shroom3-201ENSMUST00000113051 Lce3cQ91V05 98 aa6.49□□□□□ -1.37
Shroom3-201ENSMUST00000113051 Gm10272F7CZ33 110 aa6.47□□□□□ -1.37
Shroom3-201ENSMUST00000113051 Dync2h1Q45VK7 4306 aa6.46□□□□□ -1.37
Shroom3-201ENSMUST00000113051 Dnah7bL7N1Y0 4068 aa6.46□□□□□ -1.38
Shroom3-201ENSMUST00000113051 Kmt2aP55200 3966 aa6.43□□□□□ -1.38
Shroom3-201ENSMUST00000113051 PrkdcP97313 4128 aa6.42□□□□□ -1.38
Shroom3-201ENSMUST00000113051 Dnah9B1AR51 4484 aa6.41□□□□□ -1.38
Shroom3-201ENSMUST00000113051 Dnah1E9Q8T7 4250 aa6.41□□□□□ -1.38
Shroom3-201ENSMUST00000113051 Dnah6E9Q0B6 4144 aa6.4□□□□□ -1.39
Shroom3-201ENSMUST00000113051 SacsQ9JLC8 4582 aa6.35□□□□□ -1.39
Shroom3-201ENSMUST00000113051 Dnah3Q8BW94 4083 aa6.35□□□□□ -1.39
Shroom3-201ENSMUST00000113051 Fat1A0A1L1SQU7 4645 aa6.35□□□□□ -1.39
Shroom3-201ENSMUST00000113051 TnxbO35452 4006 aa6.32□□□□□ -1.4
Shroom3-201ENSMUST00000113051 Sprr2iO70560 76 aa6.32□□□□□ -1.4
Shroom3-201ENSMUST00000113051 Dync1h1Q9JHU4 4644 aaKnown RBP6.3□□□□□ -1.4
Shroom3-201ENSMUST00000113051 Krtap16-3Q8C1I6 86 aa6.28□□□□□ -1.4
Shroom3-201ENSMUST00000113051 Krtap19-3Q925H6 87 aa6.28□□□□□ -1.4
Shroom3-201ENSMUST00000113051 Lce1jD3YUU5 139 aa6.27□□□□□ -1.41
Shroom3-201ENSMUST00000113051 Lce1gQ9D195 139 aa6.27□□□□□ -1.41
Shroom3-201ENSMUST00000113051 Lce1iQ9D6P5 149 aa6.27□□□□□ -1.41
Shroom3-201ENSMUST00000113051 Lce1hQ9D6R3 140 aa6.27□□□□□ -1.41
Shroom3-201ENSMUST00000113051 Lce3eF8VQJ0 98 aa6.26□□□□□ -1.41
Shroom3-201ENSMUST00000113051 Lce3fQ6PAI4 98 aa6.26□□□□□ -1.41
Shroom3-201ENSMUST00000113051 Mycbp2Q7TPH6 4711 aa6.25□□□□□ -1.41
Shroom3-201ENSMUST00000113051 Gm10100J3QK64 120 aa6.23□□□□□ -1.41
Shroom3-201ENSMUST00000113051 Lce3dE9Q8V1 98 aa6.21□□□□□ -1.42
Shroom3-201ENSMUST00000113051 Lrp1bQ9JI18 4599 aa6.2□□□□□ -1.42
Shroom3-201ENSMUST00000113051 Pkd1O08852 4293 aa6.17□□□□□ -1.42
Shroom3-201ENSMUST00000113051 Prm1P02319 51 aa6.12□□□□□ -1.43
Shroom3-201ENSMUST00000113051 Mt2P02798 61 aa6.1□□□□□ -1.43
Shroom3-201ENSMUST00000113051 Ryr1E9PZQ0 5035 aa6.09□□□□□ -1.43
Shroom3-201ENSMUST00000113051 Lce3aQ497I5 98 aa6.07□□□□□ -1.44
Shroom3-201ENSMUST00000113051 Krtap22-2J3QNX6 67 aa6.07□□□□□ -1.44
Shroom3-201ENSMUST00000113051 Sprr2fO70557 76 aa6.06□□□□□ -1.44
Shroom3-201ENSMUST00000113051 Vps13bQ80TY5 3993 aa6.06□□□□□ -1.44
Shroom3-201ENSMUST00000113051 Gm10142J3KMP7 120 aa6.05□□□□□ -1.44
Shroom3-201ENSMUST00000113051 Dnah7cA0A087WR13 4024 aa6.02□□□□□ -1.45
Shroom3-201ENSMUST00000113051 Krtap19-1Q925H2 87 aa6.01□□□□□ -1.45
Shroom3-201ENSMUST00000113051 Fras1Q80T14 4010 aa6□□□□□ -1.45
Shroom3-201ENSMUST00000113051 Lce1bQ9D149 137 aa5.97□□□□□ -1.45
Shroom3-201ENSMUST00000113051 Fat3Q8BNA6 4555 aa5.97□□□□□ -1.45
Shroom3-201ENSMUST00000113051 Dnah7aE9Q0T8 4024 aa5.95□□□□□ -1.46
Shroom3-201ENSMUST00000113051 Lce1fB9EJP6 147 aa5.95□□□□□ -1.46
Shroom3-201ENSMUST00000113051 Lce1cQ9D1C5 147 aa5.95□□□□□ -1.46
Shroom3-201ENSMUST00000113051 Lce1lQ9D1G7 135 aa5.95□□□□□ -1.46
Shroom3-201ENSMUST00000113051 Lce1dQ9D731 133 aa5.95□□□□□ -1.46
Shroom3-201ENSMUST00000113051 Krtap1-3A2A588 173 aa5.94□□□□□ -1.46
Shroom3-201ENSMUST00000113051 Hectd4E9Q2E4 4418 aa5.94□□□□□ -1.46
Shroom3-201ENSMUST00000113051 Gm7735D3YX18 52 aa5.92□□□□□ -1.46
Shroom3-201ENSMUST00000113051 Krtap19-2Q925I0 141 aa5.89□□□□□ -1.47
Shroom3-201ENSMUST00000113051 Gm11569B1AQB1 180 aa5.88□□□□□ -1.47
Shroom3-201ENSMUST00000113051 Lrp1Q91ZX7 4545 aaKnown RBP5.88□□□□□ -1.47
Shroom3-201ENSMUST00000113051 Fat2Q5F226 4351 aa5.87□□□□□ -1.47
Shroom3-201ENSMUST00000113051 Sprr2eO70556 76 aa5.87□□□□□ -1.47
Shroom3-201ENSMUST00000113051 Dnah8Q91XQ0 4731 aa5.85□□□□□ -1.47
Shroom3-201ENSMUST00000113051 Mt4P47945 62 aa5.84□□□□□ -1.48
Shroom3-201ENSMUST00000113051 Lce1eQ9D139 143 aa5.81□□□□□ -1.48
Shroom3-201ENSMUST00000113051 Gm10024A0A0A0MQA4 119 aa5.79□□□□□ -1.48
Shroom3-201ENSMUST00000113051 Dnhd1D3Z2X2 4750 aa5.77□□□□□ -1.49
Shroom3-201ENSMUST00000113051 Gm9789Q8BIG3 52 aa5.76□□□□□ -1.49
Shroom3-201ENSMUST00000113051 Krtap4-2B1AQ85 167 aa5.76□□□□□ -1.49
Shroom3-201ENSMUST00000113051 Gm10061D3Z714 54 aa5.73□□□□□ -1.49
Shroom3-201ENSMUST00000113051 Krtap4-6Q3V4B7 195 aa5.66□□□□□ -1.5
Shroom3-201ENSMUST00000113051 Ryr3A2AGL3 4863 aa5.65□□□□□ -1.51
Shroom3-201ENSMUST00000113051 Lrp2A2ARV4 4660 aa5.64□□□□□ -1.51
Shroom3-201ENSMUST00000113051 Pkhd1E9PZ36 4059 aa5.59□□□□□ -1.52
Shroom3-201ENSMUST00000113051 Ryr2E9Q401 4966 aaKnown RBP5.56□□□□□ -1.52
Shroom3-201ENSMUST00000113051 Herc2Q4U2R1 4836 aa5.54□□□□□ -1.52
Shroom3-201ENSMUST00000113051 HydinQ80W93 5154 aa5.5□□□□□ -1.53
Shroom3-201ENSMUST00000113051 Krtap19-4Q925H7 84 aa5.48□□□□□ -1.53
Shroom3-201ENSMUST00000113051 Kiaa1109A2AAE1 5005 aa5.44□□□□□ -1.54
Shroom3-201ENSMUST00000113051 Kmt2cQ8BRH4 4903 aa5.43□□□□□ -1.54
Shroom3-201ENSMUST00000113051 Herc1E9PZP8 4859 aa5.42□□□□□ -1.54
Shroom3-201ENSMUST00000113051 Krtap9-3Q3V2C1 136 aa5.42□□□□□ -1.54
Shroom3-201ENSMUST00000113051 PcloQ9QYX7 5068 aa5.39□□□□□ -1.55
Shroom3-201ENSMUST00000113051 Krtap4-1Q3UUY3 169 aa5.38□□□□□ -1.55
Shroom3-201ENSMUST00000113051 Gm11596B1AQB0 205 aa5.31□□□□□ -1.56
Shroom3-201ENSMUST00000113051 2300003K06RikA2A4M0 262 aa5.3□□□□□ -1.56
Shroom3-201ENSMUST00000113051 Pkhd1l1Q80ZA4 4249 aa5.3□□□□□ -1.56
Shroom3-201ENSMUST00000113051 Gm11564A2A4L9 201 aa5.25□□□□□ -1.57
Shroom3-201ENSMUST00000113051 Gm11563B1AQ90 168 aa5.25□□□□□ -1.57
Shroom3-201ENSMUST00000113051 Gm11595B1AQA7 289 aa5.25□□□□□ -1.57
Shroom3-201ENSMUST00000113051 Krtap4-8B1AQA8 209 aa5.25□□□□□ -1.57
Shroom3-201ENSMUST00000113051 Lce1a2Q9D1K4 149 aa5.23□□□□□ -1.57
Shroom3-201ENSMUST00000113051 Krtap4-7Q9D732 168 aa5.22□□□□□ -1.57
Shroom3-201ENSMUST00000113051 Krtap4-9B1AQA9 244 aa5.21□□□□□ -1.58
Shroom3-201ENSMUST00000113051 Krtap4-13Q9D7P3 165 aa5.16□□□□□ -1.58
Retrieved 100 of 22,080 RNA–protein pairs in 139.1 ms