RNA–Protein interactions for RNA: ENSMUST00000112070.7

Col7a1-202, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col7a1, Length 9,250 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-202ENSMUST00000112070 Vps13bQ80TY5 3993 aa5,58□□□□□ -1,52
Col7a1-202ENSMUST00000112070 Huwe1Q7TMY8 4377 aaKnown RBP5,53□□□□□ -1,52
Col7a1-202ENSMUST00000112070 Gm10100J3QK64 120 aa5,45□□□□□ -1,54
Col7a1-202ENSMUST00000112070 Lce3bQ9CQM7 98 aa5,41□□□□□ -1,54
Col7a1-202ENSMUST00000112070 Lce3cQ91V05 98 aa5,34□□□□□ -1,55
Col7a1-202ENSMUST00000112070 Dnah6E9Q0B6 4144 aa5,34□□□□□ -1,55
Col7a1-202ENSMUST00000112070 2310046K23RikA0A0A6YVW6 87 aa5,34□□□□□ -1,56
Col7a1-202ENSMUST00000112070 Gm10142J3KMP7 120 aa5,34□□□□□ -1,56
Col7a1-202ENSMUST00000112070 TnxbO35452 4006 aa5,33□□□□□ -1,56
Col7a1-202ENSMUST00000112070 Gm10272F7CZ33 110 aa5,32□□□□□ -1,56
Col7a1-202ENSMUST00000112070 PrkdcP97313 4128 aa5,31□□□□□ -1,56
Col7a1-202ENSMUST00000112070 Dnah10D3YYQ8 4591 aa5,28□□□□□ -1,56
Col7a1-202ENSMUST00000112070 Kmt2aP55200 3966 aa5,28□□□□□ -1,56
Col7a1-202ENSMUST00000112070 Fras1Q80T14 4010 aa5,27□□□□□ -1,57
Col7a1-202ENSMUST00000112070 Lce3dE9Q8V1 98 aa5,22□□□□□ -1,57
Col7a1-202ENSMUST00000112070 Lce3eF8VQJ0 98 aa5,22□□□□□ -1,57
Col7a1-202ENSMUST00000112070 Lce3fQ6PAI4 98 aa5,22□□□□□ -1,57
Col7a1-202ENSMUST00000112070 Dnah14A0A140LIJ4 4489 aa5,21□□□□□ -1,58
Col7a1-202ENSMUST00000112070 LorP18165 486 aa5,19□□□□□ -1,58
Col7a1-202ENSMUST00000112070 Dnah1E9Q8T7 4250 aa5,13□□□□□ -1,59
Col7a1-202ENSMUST00000112070 Lce3aQ497I5 98 aa5,1□□□□□ -1,59
Col7a1-202ENSMUST00000112070 Vps13dB1ART2 4390 aa5,01□□□□□ -1,61
Col7a1-202ENSMUST00000112070 Krtap31-2Q8CAY5 177 aa4,99□□□□□ -1,61
Col7a1-202ENSMUST00000112070 Gm10024A0A0A0MQA4 119 aa4,98□□□□□ -1,61
Col7a1-202ENSMUST00000112070 Sprr2iO70560 76 aa4,98□□□□□ -1,61
Col7a1-202ENSMUST00000112070 Krtap31-1Q9D644 177 aa4,91□□□□□ -1,62
Col7a1-202ENSMUST00000112070 Dync2h1Q45VK7 4306 aa4,88□□□□□ -1,63
Col7a1-202ENSMUST00000112070 Pkhd1E9PZ36 4059 aa4,87□□□□□ -1,63
Col7a1-202ENSMUST00000112070 Krtap16-3Q8C1I6 86 aa4,87□□□□□ -1,63
Col7a1-202ENSMUST00000112070 Sprr2fO70557 76 aa4,84□□□□□ -1,63
Col7a1-202ENSMUST00000112070 Krtap22-2J3QNX6 67 aa4,81□□□□□ -1,64
Col7a1-202ENSMUST00000112070 Hectd4E9Q2E4 4418 aa4,8□□□□□ -1,64
Col7a1-202ENSMUST00000112070 Krtap19-4Q925H7 84 aa4,78□□□□□ -1,64
Col7a1-202ENSMUST00000112070 Krtap9-5A2A5X3 358 aa4,78□□□□□ -1,64
Col7a1-202ENSMUST00000112070 Dnah5Q8VHE6 4621 aa4,76□□□□□ -1,65
Col7a1-202ENSMUST00000112070 Mt2P02798 61 aa4,75□□□□□ -1,65
Col7a1-202ENSMUST00000112070 Lce1mQ9CR91 182 aa4,73□□□□□ -1,65
Col7a1-202ENSMUST00000112070 Sprr2eO70556 76 aa4,72□□□□□ -1,65
Col7a1-202ENSMUST00000112070 Lrp1Q91ZX7 4545 aaKnown RBP4,7□□□□□ -1,66
Col7a1-202ENSMUST00000112070 Krtap19-3Q925H6 87 aa4,69□□□□□ -1,66
Col7a1-202ENSMUST00000112070 Dnah2P0C6F1 4456 aa4,68□□□□□ -1,66
Col7a1-202ENSMUST00000112070 Lce1jD3YUU5 139 aa4,68□□□□□ -1,66
Col7a1-202ENSMUST00000112070 Lce1gQ9D195 139 aa4,68□□□□□ -1,66
Col7a1-202ENSMUST00000112070 Lce1iQ9D6P5 149 aa4,68□□□□□ -1,66
Col7a1-202ENSMUST00000112070 Lce1hQ9D6R3 140 aa4,68□□□□□ -1,66
Col7a1-202ENSMUST00000112070 Krtap19-2Q925I0 141 aa4,67□□□□□ -1,66
Col7a1-202ENSMUST00000112070 Krtap9-3Q3V2C1 136 aa4,66□□□□□ -1,66
Col7a1-202ENSMUST00000112070 Lce1bQ9D149 137 aa4,63□□□□□ -1,67
Col7a1-202ENSMUST00000112070 Lce1fB9EJP6 147 aa4,61□□□□□ -1,67
Col7a1-202ENSMUST00000112070 Lce1cQ9D1C5 147 aa4,61□□□□□ -1,67
Col7a1-202ENSMUST00000112070 Lce1lQ9D1G7 135 aa4,61□□□□□ -1,67
Col7a1-202ENSMUST00000112070 Lce1dQ9D731 133 aa4,61□□□□□ -1,67
Col7a1-202ENSMUST00000112070 Lce1eQ9D139 143 aa4,61□□□□□ -1,67
Col7a1-202ENSMUST00000112070 Dnah9B1AR51 4484 aa4,6□□□□□ -1,67
Col7a1-202ENSMUST00000112070 Pkhd1l1Q80ZA4 4249 aa4,6□□□□□ -1,67
Col7a1-202ENSMUST00000112070 Dnah11E9Q7N9 4488 aa4,59□□□□□ -1,68
Col7a1-202ENSMUST00000112070 Dnah17Q69Z23 4481 aa4,55□□□□□ -1,68
Col7a1-202ENSMUST00000112070 Sprr2hO70559 108 aa4,55□□□□□ -1,68
Col7a1-202ENSMUST00000112070 Prm1P02319 51 aa4,54□□□□□ -1,68
Col7a1-202ENSMUST00000112070 Gm38119A0A0A6YX29 146 aa4,52□□□□□ -1,69
Col7a1-202ENSMUST00000112070 ApobE9Q414 4505 aa4,52□□□□□ -1,69
Col7a1-202ENSMUST00000112070 Stard9Q80TF6 4561 aa4,52□□□□□ -1,69
Col7a1-202ENSMUST00000112070 Pkd1O08852 4293 aa4,52□□□□□ -1,69
Col7a1-202ENSMUST00000112070 PlecQ9QXS1 4691 aaKnown RBP4,5□□□□□ -1,69
Col7a1-202ENSMUST00000112070 Ryr1E9PZQ0 5035 aa4,49□□□□□ -1,69
Col7a1-202ENSMUST00000112070 Krtap19-1Q925H2 87 aa4,47□□□□□ -1,69
Col7a1-202ENSMUST00000112070 Dync1h1Q9JHU4 4644 aaKnown RBP4,4□□□□□ -1,7
Col7a1-202ENSMUST00000112070 Dnah8Q91XQ0 4731 aa4,37□□□□□ -1,71
Col7a1-202ENSMUST00000112070 Fat1A0A1L1SQU7 4645 aa4,32□□□□□ -1,72
Col7a1-202ENSMUST00000112070 SacsQ9JLC8 4582 aa4,31□□□□□ -1,72
Col7a1-202ENSMUST00000112070 Mt3P28184 68 aa4,3□□□□□ -1,72
Col7a1-202ENSMUST00000112070 Mycbp2Q7TPH6 4711 aa4,28□□□□□ -1,72
Col7a1-202ENSMUST00000112070 Sprr2dO70555 85 aa4,24□□□□□ -1,73
Col7a1-202ENSMUST00000112070 Lrp1bQ9JI18 4599 aa4,24□□□□□ -1,73
Col7a1-202ENSMUST00000112070 Krtap1-3A2A588 173 aa4,22□□□□□ -1,73
Col7a1-202ENSMUST00000112070 Gm7735D3YX18 52 aa4,16□□□□□ -1,74
Col7a1-202ENSMUST00000112070 Fat2Q5F226 4351 aa4,14□□□□□ -1,75
Col7a1-202ENSMUST00000112070 Gm9789Q8BIG3 52 aa4,13□□□□□ -1,75
Col7a1-202ENSMUST00000112070 Gm11562A0PK51 136 aa4,06□□□□□ -1,76
Col7a1-202ENSMUST00000112070 Fat3Q8BNA6 4555 aa4,06□□□□□ -1,76
Col7a1-202ENSMUST00000112070 Gm11569B1AQB1 180 aa4,02□□□□□ -1,77
Col7a1-202ENSMUST00000112070 Gm10061D3Z714 54 aa4,02□□□□□ -1,77
Col7a1-202ENSMUST00000112070 Gm11938Q9D3H4 131 aa4,02□□□□□ -1,77
Col7a1-202ENSMUST00000112070 Mt4P47945 62 aa3,98□□□□□ -1,77
Col7a1-202ENSMUST00000112070 Sprr2bO70554 98 aa3,91□□□□□ -1,78
Col7a1-202ENSMUST00000112070 Krtap4-2B1AQ85 167 aa3,87□□□□□ -1,79
Col7a1-202ENSMUST00000112070 PcloQ9QYX7 5068 aa3,86□□□□□ -1,79
Col7a1-202ENSMUST00000112070 Dnhd1D3Z2X2 4750 aa3,84□□□□□ -1,79
Col7a1-202ENSMUST00000112070 Krtap4-6Q3V4B7 195 aa3,78□□□□□ -1,8
Col7a1-202ENSMUST00000112070 Kmt2cQ8BRH4 4903 aa3,74□□□□□ -1,81
Col7a1-202ENSMUST00000112070 Ryr2E9Q401 4966 aaKnown RBP3,73□□□□□ -1,81
Col7a1-202ENSMUST00000112070 Mt1P02802 61 aaKnown RBP3,72□□□□□ -1,81
Col7a1-202ENSMUST00000112070 Lrp2A2ARV4 4660 aa3,7□□□□□ -1,82
Col7a1-202ENSMUST00000112070 Lce1a2Q9D1K4 149 aa3,7□□□□□ -1,82
Col7a1-202ENSMUST00000112070 Lce1a1Q9CQH5 143 aa3,69□□□□□ -1,82
Col7a1-202ENSMUST00000112070 Krtap4-16Q91W93 202 aa3,68□□□□□ -1,82
Col7a1-202ENSMUST00000112070 ZanO88799 5376 aa3,68□□□□□ -1,82
Col7a1-202ENSMUST00000112070 Ryr3A2AGL3 4863 aa3,67□□□□□ -1,82
Col7a1-202ENSMUST00000112070 Lce1kJ3QP15 125 aa3,67□□□□□ -1,82
Col7a1-202ENSMUST00000112070 Krtap4-7Q9D732 168 aa3,66□□□□□ -1,82
Retrieved 100 of 22,080 RNA–protein pairs in 24,1 ms