RNA–Protein interactions for RNA: ENSMUST00000102632.6

Sort1-201, Transcript of Sortilin, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Sort1, Length 6,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-201ENSMUST00000102632 Krtap12-1Q9Z287 130 aa7.25□□□□□ -1.25
Sort1-201ENSMUST00000102632 Sprr2a3Q4KL71 83 aa7.17□□□□□ -1.26
Sort1-201ENSMUST00000102632 Sprr2a1Q9CQK8 83 aa7.17□□□□□ -1.26
Sort1-201ENSMUST00000102632 Sprr2iO70560 76 aa7.11□□□□□ -1.27
Sort1-201ENSMUST00000102632 Xirp2Q4U4S6 3784 aa7.09□□□□□ -1.27
Sort1-201ENSMUST00000102632 Krtap9-5A2A5X3 358 aa7.08□□□□□ -1.28
Sort1-201ENSMUST00000102632 Lce3cQ91V05 98 aa7.08□□□□□ -1.28
Sort1-201ENSMUST00000102632 Dnah5Q8VHE6 4621 aa7.04□□□□□ -1.28
Sort1-201ENSMUST00000102632 Sprr2fO70557 76 aa6.98□□□□□ -1.29
Sort1-201ENSMUST00000102632 Gm10272F7CZ33 110 aa6.97□□□□□ -1.29
Sort1-201ENSMUST00000102632 Vps13dB1ART2 4390 aa6.96□□□□□ -1.3
Sort1-201ENSMUST00000102632 Lce1jD3YUU5 139 aa6.91□□□□□ -1.3
Sort1-201ENSMUST00000102632 Lce1gQ9D195 139 aa6.91□□□□□ -1.3
Sort1-201ENSMUST00000102632 Lce1iQ9D6P5 149 aa6.91□□□□□ -1.3
Sort1-201ENSMUST00000102632 Lce1hQ9D6R3 140 aa6.91□□□□□ -1.3
Sort1-201ENSMUST00000102632 Dnah3Q8BW94 4083 aa6.91□□□□□ -1.3
Sort1-201ENSMUST00000102632 Dnah7bL7N1Y0 4068 aa6.9□□□□□ -1.31
Sort1-201ENSMUST00000102632 Dnah1E9Q8T7 4250 aa6.89□□□□□ -1.31
Sort1-201ENSMUST00000102632 PrkdcP97313 4128 aa6.86□□□□□ -1.31
Sort1-201ENSMUST00000102632 Dnah11E9Q7N9 4488 aa6.86□□□□□ -1.31
Sort1-201ENSMUST00000102632 Kmt2aP55200 3966 aa6.85□□□□□ -1.31
Sort1-201ENSMUST00000102632 Dnah2P0C6F1 4456 aa6.84□□□□□ -1.31
Sort1-201ENSMUST00000102632 ApobE9Q414 4505 aa6.84□□□□□ -1.31
Sort1-201ENSMUST00000102632 Dnah17Q69Z23 4481 aa6.81□□□□□ -1.32
Sort1-201ENSMUST00000102632 Dync2h1Q45VK7 4306 aa6.8□□□□□ -1.32
Sort1-201ENSMUST00000102632 PlecQ9QXS1 4691 aaKnown RBP6.8□□□□□ -1.32
Sort1-201ENSMUST00000102632 Lce3dE9Q8V1 98 aa6.8□□□□□ -1.32
Sort1-201ENSMUST00000102632 Lce3eF8VQJ0 98 aa6.8□□□□□ -1.32
Sort1-201ENSMUST00000102632 Lce3fQ6PAI4 98 aa6.8□□□□□ -1.32
Sort1-201ENSMUST00000102632 TnxbO35452 4006 aa6.77□□□□□ -1.33
Sort1-201ENSMUST00000102632 Dnah6E9Q0B6 4144 aa6.76□□□□□ -1.33
Sort1-201ENSMUST00000102632 Stard9Q80TF6 4561 aa6.75□□□□□ -1.33
Sort1-201ENSMUST00000102632 Krtap16-3Q8C1I6 86 aa6.74□□□□□ -1.33
Sort1-201ENSMUST00000102632 Prm1P02319 51 aa6.72□□□□□ -1.33
Sort1-201ENSMUST00000102632 Dnah9B1AR51 4484 aa6.67□□□□□ -1.34
Sort1-201ENSMUST00000102632 Fat1A0A1L1SQU7 4645 aa6.67□□□□□ -1.34
Sort1-201ENSMUST00000102632 Dnah7cA0A087WR13 4024 aa6.62□□□□□ -1.35
Sort1-201ENSMUST00000102632 Krtap19-3Q925H6 87 aa6.6□□□□□ -1.35
Sort1-201ENSMUST00000102632 Lce3aQ497I5 98 aa6.59□□□□□ -1.35
Sort1-201ENSMUST00000102632 Gm10100J3QK64 120 aa6.59□□□□□ -1.35
Sort1-201ENSMUST00000102632 Lce1bQ9D149 137 aa6.59□□□□□ -1.36
Sort1-201ENSMUST00000102632 Pkd1O08852 4293 aa6.58□□□□□ -1.36
Sort1-201ENSMUST00000102632 Krtap4-2B1AQ85 167 aa6.55□□□□□ -1.36
Sort1-201ENSMUST00000102632 Lce1fB9EJP6 147 aa6.54□□□□□ -1.36
Sort1-201ENSMUST00000102632 Lce1cQ9D1C5 147 aa6.54□□□□□ -1.36
Sort1-201ENSMUST00000102632 Lce1lQ9D1G7 135 aa6.54□□□□□ -1.36
Sort1-201ENSMUST00000102632 Lce1dQ9D731 133 aa6.54□□□□□ -1.36
Sort1-201ENSMUST00000102632 Dnah7aE9Q0T8 4024 aa6.53□□□□□ -1.36
Sort1-201ENSMUST00000102632 Gm11569B1AQB1 180 aa6.52□□□□□ -1.37
Sort1-201ENSMUST00000102632 Krtap22-2J3QNX6 67 aa6.51□□□□□ -1.37
Sort1-201ENSMUST00000102632 Sprr2eO70556 76 aa6.51□□□□□ -1.37
Sort1-201ENSMUST00000102632 Fras1Q80T14 4010 aa6.5□□□□□ -1.37
Sort1-201ENSMUST00000102632 Mt4P47945 62 aa6.5□□□□□ -1.37
Sort1-201ENSMUST00000102632 Mt2P02798 61 aa6.5□□□□□ -1.37
Sort1-201ENSMUST00000102632 Gm7735D3YX18 52 aa6.48□□□□□ -1.37
Sort1-201ENSMUST00000102632 SacsQ9JLC8 4582 aa6.46□□□□□ -1.38
Sort1-201ENSMUST00000102632 Vps13bQ80TY5 3993 aa6.44□□□□□ -1.38
Sort1-201ENSMUST00000102632 Dync1h1Q9JHU4 4644 aaKnown RBP6.43□□□□□ -1.38
Sort1-201ENSMUST00000102632 Gm10142J3KMP7 120 aa6.41□□□□□ -1.38
Sort1-201ENSMUST00000102632 Mycbp2Q7TPH6 4711 aa6.38□□□□□ -1.39
Sort1-201ENSMUST00000102632 Krtap1-3A2A588 173 aa6.37□□□□□ -1.39
Sort1-201ENSMUST00000102632 Lce1eQ9D139 143 aa6.35□□□□□ -1.39
Sort1-201ENSMUST00000102632 Lrp1bQ9JI18 4599 aa6.34□□□□□ -1.4
Sort1-201ENSMUST00000102632 Gm10024A0A0A0MQA4 119 aa6.3□□□□□ -1.4
Sort1-201ENSMUST00000102632 Krtap4-6Q3V4B7 195 aa6.29□□□□□ -1.4
Sort1-201ENSMUST00000102632 Gm9789Q8BIG3 52 aa6.29□□□□□ -1.4
Sort1-201ENSMUST00000102632 Krtap19-1Q925H2 87 aa6.24□□□□□ -1.41
Sort1-201ENSMUST00000102632 Krtap19-2Q925I0 141 aa6.23□□□□□ -1.41
Sort1-201ENSMUST00000102632 Gm10061D3Z714 54 aa6.23□□□□□ -1.41
Sort1-201ENSMUST00000102632 Fat2Q5F226 4351 aa6.15□□□□□ -1.42
Sort1-201ENSMUST00000102632 Fat3Q8BNA6 4555 aa6.12□□□□□ -1.43
Sort1-201ENSMUST00000102632 Hectd4E9Q2E4 4418 aa6.11□□□□□ -1.43
Sort1-201ENSMUST00000102632 Krtap19-4Q925H7 84 aa6.06□□□□□ -1.44
Sort1-201ENSMUST00000102632 Ryr1E9PZQ0 5035 aa5.99□□□□□ -1.45
Sort1-201ENSMUST00000102632 Krtap9-3Q3V2C1 136 aa5.98□□□□□ -1.45
Sort1-201ENSMUST00000102632 Gm11596B1AQB0 205 aa5.98□□□□□ -1.45
Sort1-201ENSMUST00000102632 Krtap4-1Q3UUY3 169 aa5.97□□□□□ -1.45
Sort1-201ENSMUST00000102632 Pkhd1E9PZ36 4059 aa5.95□□□□□ -1.46
Sort1-201ENSMUST00000102632 Dnhd1D3Z2X2 4750 aa5.94□□□□□ -1.46
Sort1-201ENSMUST00000102632 Lrp1Q91ZX7 4545 aaKnown RBP5.93□□□□□ -1.46
Sort1-201ENSMUST00000102632 Sprr2hO70559 108 aa5.89□□□□□ -1.47
Sort1-201ENSMUST00000102632 2300003K06RikA2A4M0 262 aa5.88□□□□□ -1.47
Sort1-201ENSMUST00000102632 Dnah8Q91XQ0 4731 aa5.86□□□□□ -1.47
Sort1-201ENSMUST00000102632 Gm11564A2A4L9 201 aa5.85□□□□□ -1.47
Sort1-201ENSMUST00000102632 Gm11563B1AQ90 168 aa5.85□□□□□ -1.47
Sort1-201ENSMUST00000102632 Gm11595B1AQA7 289 aa5.85□□□□□ -1.47
Sort1-201ENSMUST00000102632 Krtap4-8B1AQA8 209 aa5.85□□□□□ -1.47
Sort1-201ENSMUST00000102632 Krtap4-7Q9D732 168 aa5.82□□□□□ -1.48
Sort1-201ENSMUST00000102632 Krtap4-9B1AQA9 244 aa5.78□□□□□ -1.48
Sort1-201ENSMUST00000102632 Krtap4-13Q9D7P3 165 aa5.72□□□□□ -1.49
Sort1-201ENSMUST00000102632 Lrp2A2ARV4 4660 aa5.67□□□□□ -1.5
Sort1-201ENSMUST00000102632 Pkhd1l1Q80ZA4 4249 aa5.67□□□□□ -1.5
Sort1-201ENSMUST00000102632 Krtap17-1A2A5X6 109 aa5.66□□□□□ -1.5
Sort1-201ENSMUST00000102632 Ryr3A2AGL3 4863 aa5.64□□□□□ -1.51
Sort1-201ENSMUST00000102632 Herc2Q4U2R1 4836 aa5.58□□□□□ -1.52
Sort1-201ENSMUST00000102632 Sprr2dO70555 85 aa5.53□□□□□ -1.52
Sort1-201ENSMUST00000102632 Lce1kJ3QP15 125 aa5.48□□□□□ -1.53
Sort1-201ENSMUST00000102632 Lce1a1Q9CQH5 143 aa5.46□□□□□ -1.53
Sort1-201ENSMUST00000102632 Lce1a2Q9D1K4 149 aa5.41□□□□□ -1.54
Sort1-201ENSMUST00000102632 Ryr2E9Q401 4966 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 22,080 RNA–protein pairs in 7.3 ms