RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Gm19402J3QJV4 266 aa7.25□□□□□ -1.25
Usp48-201ENSMUST00000055131 Dnah11E9Q7N9 4488 aa7.24□□□□□ -1.25
Usp48-201ENSMUST00000055131 TnxbO35452 4006 aa7.19□□□□□ -1.26
Usp48-201ENSMUST00000055131 Krtap19-9bQ99NG9 58 aa7.14□□□□□ -1.27
Usp48-201ENSMUST00000055131 Dnah9B1AR51 4484 aa7.13□□□□□ -1.27
Usp48-201ENSMUST00000055131 Dnah7bL7N1Y0 4068 aa7.13□□□□□ -1.27
Usp48-201ENSMUST00000055131 Dync2h1Q45VK7 4306 aa7.11□□□□□ -1.27
Usp48-201ENSMUST00000055131 ApobE9Q414 4505 aa7.11□□□□□ -1.27
Usp48-201ENSMUST00000055131 PrkdcP97313 4128 aa7.1□□□□□ -1.27
Usp48-201ENSMUST00000055131 Sprr2kO70562 68 aa7.1□□□□□ -1.27
Usp48-201ENSMUST00000055131 Dync1h1Q9JHU4 4644 aaKnown RBP7.1□□□□□ -1.27
Usp48-201ENSMUST00000055131 Lce1mQ9CR91 182 aa7.1□□□□□ -1.27
Usp48-201ENSMUST00000055131 Ryr1E9PZQ0 5035 aa7.07□□□□□ -1.28
Usp48-201ENSMUST00000055131 Krtap12-1Q9Z287 130 aa7.06□□□□□ -1.28
Usp48-201ENSMUST00000055131 Mycbp2Q7TPH6 4711 aa7.03□□□□□ -1.28
Usp48-201ENSMUST00000055131 SacsQ9JLC8 4582 aa7□□□□□ -1.29
Usp48-201ENSMUST00000055131 Kmt2aP55200 3966 aa7□□□□□ -1.29
Usp48-201ENSMUST00000055131 Dnah2P0C6F1 4456 aa6.98□□□□□ -1.29
Usp48-201ENSMUST00000055131 Dnah6E9Q0B6 4144 aa6.96□□□□□ -1.29
Usp48-201ENSMUST00000055131 Ryr3A2AGL3 4863 aa6.88□□□□□ -1.31
Usp48-201ENSMUST00000055131 Lrp1bQ9JI18 4599 aa6.86□□□□□ -1.31
Usp48-201ENSMUST00000055131 Dnah1E9Q8T7 4250 aa6.8□□□□□ -1.32
Usp48-201ENSMUST00000055131 Fat1A0A1L1SQU7 4645 aa6.79□□□□□ -1.32
Usp48-201ENSMUST00000055131 Pkd1O08852 4293 aa6.75□□□□□ -1.33
Usp48-201ENSMUST00000055131 Dnah3Q8BW94 4083 aa6.71□□□□□ -1.34
Usp48-201ENSMUST00000055131 Sprr2gO70558 76 aa6.69□□□□□ -1.34
Usp48-201ENSMUST00000055131 Fat3Q8BNA6 4555 aa6.68□□□□□ -1.34
Usp48-201ENSMUST00000055131 Herc2Q4U2R1 4836 aa6.66□□□□□ -1.34
Usp48-201ENSMUST00000055131 Lrp1Q91ZX7 4545 aaKnown RBP6.65□□□□□ -1.34
Usp48-201ENSMUST00000055131 HydinQ80W93 5154 aa6.64□□□□□ -1.35
Usp48-201ENSMUST00000055131 Krtap16-3Q8C1I6 86 aa6.64□□□□□ -1.35
Usp48-201ENSMUST00000055131 Krtap19-3Q925H6 87 aa6.63□□□□□ -1.35
Usp48-201ENSMUST00000055131 Krtap9-5A2A5X3 358 aa6.62□□□□□ -1.35
Usp48-201ENSMUST00000055131 Dnah8Q91XQ0 4731 aa6.6□□□□□ -1.35
Usp48-201ENSMUST00000055131 Prm1P02319 51 aa6.57□□□□□ -1.36
Usp48-201ENSMUST00000055131 Kiaa1109A2AAE1 5005 aa6.57□□□□□ -1.36
Usp48-201ENSMUST00000055131 Lrp2A2ARV4 4660 aa6.57□□□□□ -1.36
Usp48-201ENSMUST00000055131 Lce3bQ9CQM7 98 aa6.56□□□□□ -1.36
Usp48-201ENSMUST00000055131 Hectd4E9Q2E4 4418 aa6.54□□□□□ -1.36
Usp48-201ENSMUST00000055131 Gm10272F7CZ33 110 aa6.47□□□□□ -1.37
Usp48-201ENSMUST00000055131 Fras1Q80T14 4010 aa6.47□□□□□ -1.37
Usp48-201ENSMUST00000055131 Lce3cQ91V05 98 aa6.45□□□□□ -1.38
Usp48-201ENSMUST00000055131 Krtap19-1Q925H2 87 aa6.45□□□□□ -1.38
Usp48-201ENSMUST00000055131 Ryr2E9Q401 4966 aaKnown RBP6.44□□□□□ -1.38
Usp48-201ENSMUST00000055131 Dnah7cA0A087WR13 4024 aa6.42□□□□□ -1.38
Usp48-201ENSMUST00000055131 Gm10100J3QK64 120 aa6.41□□□□□ -1.38
Usp48-201ENSMUST00000055131 Gm7735D3YX18 52 aa6.41□□□□□ -1.38
Usp48-201ENSMUST00000055131 Dnah7aE9Q0T8 4024 aa6.4□□□□□ -1.38
Usp48-201ENSMUST00000055131 Vps13bQ80TY5 3993 aa6.35□□□□□ -1.39
Usp48-201ENSMUST00000055131 Krtap1-3A2A588 173 aa6.33□□□□□ -1.4
Usp48-201ENSMUST00000055131 Dnhd1D3Z2X2 4750 aa6.31□□□□□ -1.4
Usp48-201ENSMUST00000055131 Fat2Q5F226 4351 aa6.29□□□□□ -1.4
Usp48-201ENSMUST00000055131 Gm38119A0A0A6YX29 146 aa6.27□□□□□ -1.41
Usp48-201ENSMUST00000055131 Lce3eF8VQJ0 98 aa6.27□□□□□ -1.41
Usp48-201ENSMUST00000055131 Lce3fQ6PAI4 98 aa6.27□□□□□ -1.41
Usp48-201ENSMUST00000055131 Gm9789Q8BIG3 52 aa6.26□□□□□ -1.41
Usp48-201ENSMUST00000055131 Gm10142J3KMP7 120 aa6.25□□□□□ -1.41
Usp48-201ENSMUST00000055131 Mt2P02798 61 aa6.24□□□□□ -1.41
Usp48-201ENSMUST00000055131 PcloQ9QYX7 5068 aa6.22□□□□□ -1.41
Usp48-201ENSMUST00000055131 Krtap22-2J3QNX6 67 aa6.22□□□□□ -1.41
Usp48-201ENSMUST00000055131 Lce3dE9Q8V1 98 aa6.2□□□□□ -1.42
Usp48-201ENSMUST00000055131 2310046K23RikA0A0A6YVW6 87 aa6.17□□□□□ -1.42
Usp48-201ENSMUST00000055131 Krtap19-2Q925I0 141 aa6.15□□□□□ -1.43
Usp48-201ENSMUST00000055131 Kmt2cQ8BRH4 4903 aa6.14□□□□□ -1.43
Usp48-201ENSMUST00000055131 Lce1jD3YUU5 139 aa6.09□□□□□ -1.43
Usp48-201ENSMUST00000055131 Sprr2iO70560 76 aa6.09□□□□□ -1.43
Usp48-201ENSMUST00000055131 Lce3aQ497I5 98 aa6.09□□□□□ -1.43
Usp48-201ENSMUST00000055131 Gm10061D3Z714 54 aa6.07□□□□□ -1.44
Usp48-201ENSMUST00000055131 Gm11569B1AQB1 180 aa6.06□□□□□ -1.44
Usp48-201ENSMUST00000055131 Birc6O88738 4882 aa6.04□□□□□ -1.44
Usp48-201ENSMUST00000055131 Pkhd1E9PZ36 4059 aa6.04□□□□□ -1.44
Usp48-201ENSMUST00000055131 Lce1gQ9D195 139 aa6.03□□□□□ -1.44
Usp48-201ENSMUST00000055131 Lce1iQ9D6P5 149 aa6.03□□□□□ -1.44
Usp48-201ENSMUST00000055131 Lce1hQ9D6R3 140 aa6.03□□□□□ -1.44
Usp48-201ENSMUST00000055131 Herc1E9PZP8 4859 aa5.98□□□□□ -1.45
Usp48-201ENSMUST00000055131 Abca13Q5SSE9 5034 aa5.93□□□□□ -1.46
Usp48-201ENSMUST00000055131 Mdn1A2ANY6 5589 aaKnown RBP5.9□□□□□ -1.46
Usp48-201ENSMUST00000055131 Krtap4-2B1AQ85 167 aa5.87□□□□□ -1.47
Usp48-201ENSMUST00000055131 Lce1fB9EJP6 147 aa5.86□□□□□ -1.47
Usp48-201ENSMUST00000055131 Lce1cQ9D1C5 147 aa5.86□□□□□ -1.47
Usp48-201ENSMUST00000055131 Lce1lQ9D1G7 135 aa5.86□□□□□ -1.47
Usp48-201ENSMUST00000055131 Lce1dQ9D731 133 aa5.86□□□□□ -1.47
Usp48-201ENSMUST00000055131 Lce1bQ9D149 137 aa5.83□□□□□ -1.48
Usp48-201ENSMUST00000055131 4932415D10RikA0A1W2P6U8 4986 aa5.83□□□□□ -1.48
Usp48-201ENSMUST00000055131 Gm10024A0A0A0MQA4 119 aa5.81□□□□□ -1.48
Usp48-201ENSMUST00000055131 Mt4P47945 62 aa5.79□□□□□ -1.48
Usp48-201ENSMUST00000055131 Krtap4-6Q3V4B7 195 aa5.78□□□□□ -1.48
Usp48-201ENSMUST00000055131 Lce1eQ9D139 143 aa5.76□□□□□ -1.49
Usp48-201ENSMUST00000055131 Pkhd1l1Q80ZA4 4249 aa5.75□□□□□ -1.49
Usp48-201ENSMUST00000055131 Sprr2eO70556 76 aa5.73□□□□□ -1.49
Usp48-201ENSMUST00000055131 Krtap9-3Q3V2C1 136 aa5.67□□□□□ -1.5
Usp48-201ENSMUST00000055131 Sprr2fO70557 76 aa5.66□□□□□ -1.5
Usp48-201ENSMUST00000055131 Ubr4A2AN08 5180 aa5.62□□□□□ -1.51
Usp48-201ENSMUST00000055131 Krtap19-4Q925H7 84 aa5.61□□□□□ -1.51
Usp48-201ENSMUST00000055131 Fat4Q2PZL6 4981 aa5.6□□□□□ -1.51
Usp48-201ENSMUST00000055131 Krtap4-1Q3UUY3 169 aa5.53□□□□□ -1.52
Usp48-201ENSMUST00000055131 ZanO88799 5376 aa5.51□□□□□ -1.53
Usp48-201ENSMUST00000055131 Lce1a2Q9D1K4 149 aa5.51□□□□□ -1.53
Usp48-201ENSMUST00000055131 Krtap17-1A2A5X6 109 aa5.5□□□□□ -1.53
Usp48-201ENSMUST00000055131 Gm11596B1AQB0 205 aa5.47□□□□□ -1.53
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms