RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Sprr2a1Q9CQK8 83 aa7.85□□□□□ -1.15
Scaf11-201ENSMUST00000047835 Dnah9B1AR51 4484 aa7.85□□□□□ -1.15
Scaf11-201ENSMUST00000047835 ApobE9Q414 4505 aa7.83□□□□□ -1.16
Scaf11-201ENSMUST00000047835 Dync1h1Q9JHU4 4644 aaKnown RBP7.83□□□□□ -1.16
Scaf11-201ENSMUST00000047835 Gm19402J3QJV4 266 aa7.83□□□□□ -1.16
Scaf11-201ENSMUST00000047835 Krtap8-1O08633 61 aa7.83□□□□□ -1.16
Scaf11-201ENSMUST00000047835 Dnah7bL7N1Y0 4068 aa7.8□□□□□ -1.16
Scaf11-201ENSMUST00000047835 PrkdcP97313 4128 aa7.77□□□□□ -1.17
Scaf11-201ENSMUST00000047835 Dnah2P0C6F1 4456 aa7.72□□□□□ -1.17
Scaf11-201ENSMUST00000047835 Lce1mQ9CR91 182 aa7.7□□□□□ -1.18
Scaf11-201ENSMUST00000047835 Krtap7-1Q9D3I6 87 aa7.67□□□□□ -1.18
Scaf11-201ENSMUST00000047835 Krtap12-1Q9Z287 130 aa7.67□□□□□ -1.18
Scaf11-201ENSMUST00000047835 SacsQ9JLC8 4582 aa7.66□□□□□ -1.18
Scaf11-201ENSMUST00000047835 Sprr2kO70562 68 aa7.66□□□□□ -1.18
Scaf11-201ENSMUST00000047835 Dnah6E9Q0B6 4144 aa7.66□□□□□ -1.18
Scaf11-201ENSMUST00000047835 Dnah1E9Q8T7 4250 aa7.64□□□□□ -1.19
Scaf11-201ENSMUST00000047835 Kmt2aP55200 3966 aa7.61□□□□□ -1.19
Scaf11-201ENSMUST00000047835 Dnah3Q8BW94 4083 aa7.6□□□□□ -1.19
Scaf11-201ENSMUST00000047835 Ryr1E9PZQ0 5035 aa7.57□□□□□ -1.2
Scaf11-201ENSMUST00000047835 Mycbp2Q7TPH6 4711 aa7.56□□□□□ -1.2
Scaf11-201ENSMUST00000047835 Lrp1bQ9JI18 4599 aa7.56□□□□□ -1.2
Scaf11-201ENSMUST00000047835 Pkd1O08852 4293 aa7.55□□□□□ -1.2
Scaf11-201ENSMUST00000047835 Krtap19-9bQ99NG9 58 aa7.55□□□□□ -1.2
Scaf11-201ENSMUST00000047835 Fat1A0A1L1SQU7 4645 aa7.46□□□□□ -1.21
Scaf11-201ENSMUST00000047835 Ryr3A2AGL3 4863 aa7.35□□□□□ -1.23
Scaf11-201ENSMUST00000047835 Krtap16-3Q8C1I6 86 aa7.35□□□□□ -1.23
Scaf11-201ENSMUST00000047835 Krtap19-3Q925H6 87 aa7.33□□□□□ -1.24
Scaf11-201ENSMUST00000047835 Fat3Q8BNA6 4555 aa7.32□□□□□ -1.24
Scaf11-201ENSMUST00000047835 Hectd4E9Q2E4 4418 aa7.3□□□□□ -1.24
Scaf11-201ENSMUST00000047835 Krtap9-5A2A5X3 358 aa7.29□□□□□ -1.24
Scaf11-201ENSMUST00000047835 Dnah8Q91XQ0 4731 aa7.23□□□□□ -1.25
Scaf11-201ENSMUST00000047835 Fras1Q80T14 4010 aa7.2□□□□□ -1.26
Scaf11-201ENSMUST00000047835 Prm1P02319 51 aa7.2□□□□□ -1.26
Scaf11-201ENSMUST00000047835 Sprr2gO70558 76 aa7.19□□□□□ -1.26
Scaf11-201ENSMUST00000047835 Lrp1Q91ZX7 4545 aaKnown RBP7.16□□□□□ -1.26
Scaf11-201ENSMUST00000047835 Krtap19-1Q925H2 87 aa7.14□□□□□ -1.27
Scaf11-201ENSMUST00000047835 Herc2Q4U2R1 4836 aa7.12□□□□□ -1.27
Scaf11-201ENSMUST00000047835 Ryr2E9Q401 4966 aaKnown RBP7.07□□□□□ -1.28
Scaf11-201ENSMUST00000047835 Dnah7aE9Q0T8 4024 aa7.03□□□□□ -1.28
Scaf11-201ENSMUST00000047835 Dnah7cA0A087WR13 4024 aa7.02□□□□□ -1.29
Scaf11-201ENSMUST00000047835 HydinQ80W93 5154 aa7.01□□□□□ -1.29
Scaf11-201ENSMUST00000047835 Kiaa1109A2AAE1 5005 aa7.01□□□□□ -1.29
Scaf11-201ENSMUST00000047835 Lrp2A2ARV4 4660 aa6.99□□□□□ -1.29
Scaf11-201ENSMUST00000047835 Fat2Q5F226 4351 aa6.97□□□□□ -1.29
Scaf11-201ENSMUST00000047835 Gm7735D3YX18 52 aa6.97□□□□□ -1.29
Scaf11-201ENSMUST00000047835 Lce3bQ9CQM7 98 aa6.96□□□□□ -1.3
Scaf11-201ENSMUST00000047835 Krtap1-3A2A588 173 aa6.93□□□□□ -1.3
Scaf11-201ENSMUST00000047835 Dnhd1D3Z2X2 4750 aa6.92□□□□□ -1.3
Scaf11-201ENSMUST00000047835 Vps13bQ80TY5 3993 aa6.9□□□□□ -1.3
Scaf11-201ENSMUST00000047835 Gm10272F7CZ33 110 aa6.87□□□□□ -1.31
Scaf11-201ENSMUST00000047835 Gm9789Q8BIG3 52 aa6.84□□□□□ -1.31
Scaf11-201ENSMUST00000047835 Mt2P02798 61 aa6.84□□□□□ -1.31
Scaf11-201ENSMUST00000047835 Gm38119A0A0A6YX29 146 aa6.79□□□□□ -1.32
Scaf11-201ENSMUST00000047835 Krtap19-2Q925I0 141 aa6.79□□□□□ -1.32
Scaf11-201ENSMUST00000047835 Lce3cQ91V05 98 aa6.77□□□□□ -1.33
Scaf11-201ENSMUST00000047835 Krtap22-2J3QNX6 67 aa6.76□□□□□ -1.33
Scaf11-201ENSMUST00000047835 Lce1jD3YUU5 139 aa6.72□□□□□ -1.33
Scaf11-201ENSMUST00000047835 PcloQ9QYX7 5068 aa6.65□□□□□ -1.35
Scaf11-201ENSMUST00000047835 Kmt2cQ8BRH4 4903 aa6.63□□□□□ -1.35
Scaf11-201ENSMUST00000047835 2310046K23RikA0A0A6YVW6 87 aa6.63□□□□□ -1.35
Scaf11-201ENSMUST00000047835 Gm10061D3Z714 54 aa6.61□□□□□ -1.35
Scaf11-201ENSMUST00000047835 Gm10100J3QK64 120 aa6.59□□□□□ -1.35
Scaf11-201ENSMUST00000047835 Herc1E9PZP8 4859 aa6.59□□□□□ -1.35
Scaf11-201ENSMUST00000047835 Pkhd1E9PZ36 4059 aa6.57□□□□□ -1.36
Scaf11-201ENSMUST00000047835 Birc6O88738 4882 aa6.56□□□□□ -1.36
Scaf11-201ENSMUST00000047835 Gm11569B1AQB1 180 aa6.56□□□□□ -1.36
Scaf11-201ENSMUST00000047835 Lce3eF8VQJ0 98 aa6.56□□□□□ -1.36
Scaf11-201ENSMUST00000047835 Lce3fQ6PAI4 98 aa6.56□□□□□ -1.36
Scaf11-201ENSMUST00000047835 Sprr2iO70560 76 aa6.54□□□□□ -1.36
Scaf11-201ENSMUST00000047835 Lce3dE9Q8V1 98 aa6.5□□□□□ -1.37
Scaf11-201ENSMUST00000047835 Gm10142J3KMP7 120 aa6.4□□□□□ -1.38
Scaf11-201ENSMUST00000047835 Lce1gQ9D195 139 aa6.37□□□□□ -1.39
Scaf11-201ENSMUST00000047835 Lce1iQ9D6P5 149 aa6.37□□□□□ -1.39
Scaf11-201ENSMUST00000047835 Lce1hQ9D6R3 140 aa6.37□□□□□ -1.39
Scaf11-201ENSMUST00000047835 Pkhd1l1Q80ZA4 4249 aa6.36□□□□□ -1.39
Scaf11-201ENSMUST00000047835 Lce3aQ497I5 98 aa6.36□□□□□ -1.39
Scaf11-201ENSMUST00000047835 Abca13Q5SSE9 5034 aa6.33□□□□□ -1.4
Scaf11-201ENSMUST00000047835 Lce1bQ9D149 137 aa6.29□□□□□ -1.4
Scaf11-201ENSMUST00000047835 Lce1fB9EJP6 147 aa6.28□□□□□ -1.4
Scaf11-201ENSMUST00000047835 Lce1cQ9D1C5 147 aa6.28□□□□□ -1.4
Scaf11-201ENSMUST00000047835 Lce1lQ9D1G7 135 aa6.28□□□□□ -1.4
Scaf11-201ENSMUST00000047835 Lce1dQ9D731 133 aa6.28□□□□□ -1.4
Scaf11-201ENSMUST00000047835 Krtap4-2B1AQ85 167 aa6.27□□□□□ -1.4
Scaf11-201ENSMUST00000047835 Mt4P47945 62 aa6.25□□□□□ -1.41
Scaf11-201ENSMUST00000047835 4932415D10RikA0A1W2P6U8 4986 aa6.21□□□□□ -1.42
Scaf11-201ENSMUST00000047835 Krtap4-6Q3V4B7 195 aa6.21□□□□□ -1.42
Scaf11-201ENSMUST00000047835 Mdn1A2ANY6 5589 aaKnown RBP6.2□□□□□ -1.42
Scaf11-201ENSMUST00000047835 Lce1eQ9D139 143 aa6.12□□□□□ -1.43
Scaf11-201ENSMUST00000047835 Lce1a2Q9D1K4 149 aa6.1□□□□□ -1.43
Scaf11-201ENSMUST00000047835 Krtap9-3Q3V2C1 136 aa6.06□□□□□ -1.44
Scaf11-201ENSMUST00000047835 Fat4Q2PZL6 4981 aa6.03□□□□□ -1.44
Scaf11-201ENSMUST00000047835 Ubr4A2AN08 5180 aa6.01□□□□□ -1.45
Scaf11-201ENSMUST00000047835 Sprr2fO70557 76 aa6.01□□□□□ -1.45
Scaf11-201ENSMUST00000047835 ZanO88799 5376 aa5.99□□□□□ -1.45
Scaf11-201ENSMUST00000047835 Sprr2eO70556 76 aa5.99□□□□□ -1.45
Scaf11-201ENSMUST00000047835 Krtap17-1A2A5X6 109 aa5.96□□□□□ -1.46
Scaf11-201ENSMUST00000047835 Krtap4-1Q3UUY3 169 aa5.95□□□□□ -1.46
Scaf11-201ENSMUST00000047835 Gm10024A0A0A0MQA4 119 aa5.95□□□□□ -1.46
Scaf11-201ENSMUST00000047835 Gm11596B1AQB0 205 aa5.88□□□□□ -1.47
Scaf11-201ENSMUST00000047835 Krtap19-4Q925H7 84 aa5.86□□□□□ -1.47
Retrieved 100 of 22,080 RNA–protein pairs in 93 ms