RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Sprr2gO70558 76 aa5.66□□□□□ -1.5
Col5a1-201ENSMUST00000028280 Krtap1-4Q3V2D6 188 aa5.65□□□□□ -1.51
Col5a1-201ENSMUST00000028280 Kmt2aP55200 3966 aa5.64□□□□□ -1.51
Col5a1-201ENSMUST00000028280 Dnah7aE9Q0T8 4024 aa5.63□□□□□ -1.51
Col5a1-201ENSMUST00000028280 Dnah6E9Q0B6 4144 aa5.6□□□□□ -1.51
Col5a1-201ENSMUST00000028280 Dnah10D3YYQ8 4591 aa5.59□□□□□ -1.52
Col5a1-201ENSMUST00000028280 TnxbO35452 4006 aa5.55□□□□□ -1.52
Col5a1-201ENSMUST00000028280 Dnah14A0A140LIJ4 4489 aa5.47□□□□□ -1.53
Col5a1-201ENSMUST00000028280 Dnah1E9Q8T7 4250 aa5.47□□□□□ -1.53
Col5a1-201ENSMUST00000028280 Gm10100J3QK64 120 aa5.41□□□□□ -1.54
Col5a1-201ENSMUST00000028280 LorP18165 486 aa5.37□□□□□ -1.55
Col5a1-201ENSMUST00000028280 Vps13dB1ART2 4390 aa5.36□□□□□ -1.55
Col5a1-201ENSMUST00000028280 Lce3bQ9CQM7 98 aa5.35□□□□□ -1.55
Col5a1-201ENSMUST00000028280 Lce3cQ91V05 98 aa5.34□□□□□ -1.55
Col5a1-201ENSMUST00000028280 Fras1Q80T14 4010 aa5.33□□□□□ -1.56
Col5a1-201ENSMUST00000028280 Dync2h1Q45VK7 4306 aa5.31□□□□□ -1.56
Col5a1-201ENSMUST00000028280 Gm10142J3KMP7 120 aa5.27□□□□□ -1.57
Col5a1-201ENSMUST00000028280 Dnah2P0C6F1 4456 aa5.25□□□□□ -1.57
Col5a1-201ENSMUST00000028280 Dnah17Q69Z23 4481 aa5.24□□□□□ -1.57
Col5a1-201ENSMUST00000028280 Gm10272F7CZ33 110 aa5.23□□□□□ -1.57
Col5a1-201ENSMUST00000028280 Dnah11E9Q7N9 4488 aa5.21□□□□□ -1.58
Col5a1-201ENSMUST00000028280 Lce3eF8VQJ0 98 aa5.2□□□□□ -1.58
Col5a1-201ENSMUST00000028280 Lce3fQ6PAI4 98 aa5.2□□□□□ -1.58
Col5a1-201ENSMUST00000028280 Dnah5Q8VHE6 4621 aa5.16□□□□□ -1.58
Col5a1-201ENSMUST00000028280 Lce3dE9Q8V1 98 aa5.13□□□□□ -1.59
Col5a1-201ENSMUST00000028280 Hectd4E9Q2E4 4418 aa5.1□□□□□ -1.59
Col5a1-201ENSMUST00000028280 2310046K23RikA0A0A6YVW6 87 aa5.08□□□□□ -1.6
Col5a1-201ENSMUST00000028280 Lce3aQ497I5 98 aa5.06□□□□□ -1.6
Col5a1-201ENSMUST00000028280 Dnah9B1AR51 4484 aa5.05□□□□□ -1.6
Col5a1-201ENSMUST00000028280 ApobE9Q414 4505 aa5.04□□□□□ -1.6
Col5a1-201ENSMUST00000028280 Pkd1O08852 4293 aa4.96□□□□□ -1.61
Col5a1-201ENSMUST00000028280 Gm10024A0A0A0MQA4 119 aa4.95□□□□□ -1.62
Col5a1-201ENSMUST00000028280 Sprr2iO70560 76 aa4.94□□□□□ -1.62
Col5a1-201ENSMUST00000028280 Krtap9-5A2A5X3 358 aa4.93□□□□□ -1.62
Col5a1-201ENSMUST00000028280 Stard9Q80TF6 4561 aa4.93□□□□□ -1.62
Col5a1-201ENSMUST00000028280 Sprr2fO70557 76 aa4.9□□□□□ -1.62
Col5a1-201ENSMUST00000028280 Lce1mQ9CR91 182 aa4.9□□□□□ -1.62
Col5a1-201ENSMUST00000028280 Krtap31-2Q8CAY5 177 aa4.9□□□□□ -1.63
Col5a1-201ENSMUST00000028280 Pkhd1E9PZ36 4059 aa4.89□□□□□ -1.63
Col5a1-201ENSMUST00000028280 Lce1jD3YUU5 139 aa4.87□□□□□ -1.63
Col5a1-201ENSMUST00000028280 Lce1gQ9D195 139 aa4.87□□□□□ -1.63
Col5a1-201ENSMUST00000028280 Lce1iQ9D6P5 149 aa4.87□□□□□ -1.63
Col5a1-201ENSMUST00000028280 Lce1hQ9D6R3 140 aa4.87□□□□□ -1.63
Col5a1-201ENSMUST00000028280 Krtap16-3Q8C1I6 86 aa4.87□□□□□ -1.63
Col5a1-201ENSMUST00000028280 Krtap19-3Q925H6 87 aa4.83□□□□□ -1.64
Col5a1-201ENSMUST00000028280 PlecQ9QXS1 4691 aaKnown RBP4.81□□□□□ -1.64
Col5a1-201ENSMUST00000028280 Gm38119A0A0A6YX29 146 aa4.77□□□□□ -1.65
Col5a1-201ENSMUST00000028280 Krtap22-2J3QNX6 67 aa4.76□□□□□ -1.65
Col5a1-201ENSMUST00000028280 Fat2Q5F226 4351 aa4.76□□□□□ -1.65
Col5a1-201ENSMUST00000028280 Sprr2eO70556 76 aa4.75□□□□□ -1.65
Col5a1-201ENSMUST00000028280 Mt2P02798 61 aa4.75□□□□□ -1.65
Col5a1-201ENSMUST00000028280 Pkhd1l1Q80ZA4 4249 aa4.75□□□□□ -1.65
Col5a1-201ENSMUST00000028280 Lrp1bQ9JI18 4599 aa4.75□□□□□ -1.65
Col5a1-201ENSMUST00000028280 Fat1A0A1L1SQU7 4645 aa4.73□□□□□ -1.65
Col5a1-201ENSMUST00000028280 Krtap31-1Q9D644 177 aa4.72□□□□□ -1.65
Col5a1-201ENSMUST00000028280 SacsQ9JLC8 4582 aa4.7□□□□□ -1.66
Col5a1-201ENSMUST00000028280 Krtap19-1Q925H2 87 aa4.66□□□□□ -1.66
Col5a1-201ENSMUST00000028280 Lce1bQ9D149 137 aa4.65□□□□□ -1.66
Col5a1-201ENSMUST00000028280 Lce1fB9EJP6 147 aa4.64□□□□□ -1.67
Col5a1-201ENSMUST00000028280 Lce1cQ9D1C5 147 aa4.64□□□□□ -1.67
Col5a1-201ENSMUST00000028280 Lce1lQ9D1G7 135 aa4.64□□□□□ -1.67
Col5a1-201ENSMUST00000028280 Lce1dQ9D731 133 aa4.64□□□□□ -1.67
Col5a1-201ENSMUST00000028280 Lce1eQ9D139 143 aa4.64□□□□□ -1.67
Col5a1-201ENSMUST00000028280 Mycbp2Q7TPH6 4711 aa4.63□□□□□ -1.67
Col5a1-201ENSMUST00000028280 Dync1h1Q9JHU4 4644 aaKnown RBP4.63□□□□□ -1.67
Col5a1-201ENSMUST00000028280 Krtap19-2Q925I0 141 aa4.62□□□□□ -1.67
Col5a1-201ENSMUST00000028280 Prm1P02319 51 aa4.62□□□□□ -1.67
Col5a1-201ENSMUST00000028280 Lrp1Q91ZX7 4545 aaKnown RBP4.62□□□□□ -1.67
Col5a1-201ENSMUST00000028280 Krtap19-4Q925H7 84 aa4.58□□□□□ -1.68
Col5a1-201ENSMUST00000028280 Krtap9-3Q3V2C1 136 aa4.57□□□□□ -1.68
Col5a1-201ENSMUST00000028280 Dnah8Q91XQ0 4731 aa4.56□□□□□ -1.68
Col5a1-201ENSMUST00000028280 Fat3Q8BNA6 4555 aa4.47□□□□□ -1.69
Col5a1-201ENSMUST00000028280 Krtap1-3A2A588 173 aa4.37□□□□□ -1.71
Col5a1-201ENSMUST00000028280 Gm7735D3YX18 52 aa4.34□□□□□ -1.71
Col5a1-201ENSMUST00000028280 Gm9789Q8BIG3 52 aa4.31□□□□□ -1.72
Col5a1-201ENSMUST00000028280 Sprr2hO70559 108 aa4.29□□□□□ -1.72
Col5a1-201ENSMUST00000028280 Sprr2dO70555 85 aa4.28□□□□□ -1.72
Col5a1-201ENSMUST00000028280 Gm10061D3Z714 54 aa4.19□□□□□ -1.74
Col5a1-201ENSMUST00000028280 Gm11569B1AQB1 180 aa4.17□□□□□ -1.74
Col5a1-201ENSMUST00000028280 Mt4P47945 62 aa4.1□□□□□ -1.75
Col5a1-201ENSMUST00000028280 Mt3P28184 68 aa4.06□□□□□ -1.76
Col5a1-201ENSMUST00000028280 Gm11562A0PK51 136 aa4□□□□□ -1.77
Col5a1-201ENSMUST00000028280 Dnhd1D3Z2X2 4750 aa3.97□□□□□ -1.77
Col5a1-201ENSMUST00000028280 Lrp2A2ARV4 4660 aa3.97□□□□□ -1.77
Col5a1-201ENSMUST00000028280 Gm11938Q9D3H4 131 aa3.95□□□□□ -1.78
Col5a1-201ENSMUST00000028280 Ryr1E9PZQ0 5035 aa3.95□□□□□ -1.78
Col5a1-201ENSMUST00000028280 Kmt2cQ8BRH4 4903 aa3.95□□□□□ -1.78
Col5a1-201ENSMUST00000028280 Lce1a2Q9D1K4 149 aa3.94□□□□□ -1.78
Col5a1-201ENSMUST00000028280 Krtap4-16Q91W93 202 aa3.94□□□□□ -1.78
Col5a1-201ENSMUST00000028280 Krtap4-6Q3V4B7 195 aa3.9□□□□□ -1.79
Col5a1-201ENSMUST00000028280 Krtap4-2B1AQ85 167 aa3.89□□□□□ -1.79
Col5a1-201ENSMUST00000028280 Lce1a1Q9CQH5 143 aa3.86□□□□□ -1.79
Col5a1-201ENSMUST00000028280 Syne1Q6ZWR6 8799 aa3.84□□□□□ -1.8
Col5a1-201ENSMUST00000028280 Ryr2E9Q401 4966 aaKnown RBP3.82□□□□□ -1.8
Col5a1-201ENSMUST00000028280 Sprr2bO70554 98 aa3.82□□□□□ -1.8
Col5a1-201ENSMUST00000028280 Lce1kJ3QP15 125 aa3.82□□□□□ -1.8
Col5a1-201ENSMUST00000028280 Ryr3A2AGL3 4863 aa3.75□□□□□ -1.81
Col5a1-201ENSMUST00000028280 2300003K06RikA2A4M0 262 aa3.74□□□□□ -1.81
Col5a1-201ENSMUST00000028280 Krtap4-7Q9D732 168 aa3.74□□□□□ -1.81
Col5a1-201ENSMUST00000028280 Herc2Q4U2R1 4836 aa3.7□□□□□ -1.82
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms