RNA–Protein interactions for RNA: ENSMUST00000002412.8

Ncan-201, Transcript of Neurocan core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncan, Length 7,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncan-201ENSMUST00000002412 2310046K23RikA0A0A6YVW6 87 aa4.9□□□□□ -1.62
Ncan-201ENSMUST00000002412 Lce3bQ9CQM7 98 aa4.9□□□□□ -1.63
Ncan-201ENSMUST00000002412 Dnah14A0A140LIJ4 4489 aa4.89□□□□□ -1.63
Ncan-201ENSMUST00000002412 Dnah10D3YYQ8 4591 aa4.88□□□□□ -1.63
Ncan-201ENSMUST00000002412 Gm10272F7CZ33 110 aa4.83□□□□□ -1.64
Ncan-201ENSMUST00000002412 Gm10142J3KMP7 120 aa4.78□□□□□ -1.64
Ncan-201ENSMUST00000002412 Lce3eF8VQJ0 98 aa4.77□□□□□ -1.65
Ncan-201ENSMUST00000002412 Lce3fQ6PAI4 98 aa4.77□□□□□ -1.65
Ncan-201ENSMUST00000002412 Lce1jD3YUU5 139 aa4.7□□□□□ -1.66
Ncan-201ENSMUST00000002412 Lce1gQ9D195 139 aa4.7□□□□□ -1.66
Ncan-201ENSMUST00000002412 Lce1iQ9D6P5 149 aa4.7□□□□□ -1.66
Ncan-201ENSMUST00000002412 Lce1hQ9D6R3 140 aa4.7□□□□□ -1.66
Ncan-201ENSMUST00000002412 Dnah5Q8VHE6 4621 aa4.67□□□□□ -1.66
Ncan-201ENSMUST00000002412 Lce3dE9Q8V1 98 aa4.67□□□□□ -1.66
Ncan-201ENSMUST00000002412 Sprr2fO70557 76 aa4.64□□□□□ -1.67
Ncan-201ENSMUST00000002412 Lce3aQ497I5 98 aa4.62□□□□□ -1.67
Ncan-201ENSMUST00000002412 Kmt2aP55200 3966 aa4.58□□□□□ -1.68
Ncan-201ENSMUST00000002412 Dnah11E9Q7N9 4488 aa4.58□□□□□ -1.68
Ncan-201ENSMUST00000002412 Gm38119A0A0A6YX29 146 aa4.57□□□□□ -1.68
Ncan-201ENSMUST00000002412 Dnah17Q69Z23 4481 aa4.57□□□□□ -1.68
Ncan-201ENSMUST00000002412 Dnah7bL7N1Y0 4068 aa4.57□□□□□ -1.68
Ncan-201ENSMUST00000002412 Dnah2P0C6F1 4456 aa4.56□□□□□ -1.68
Ncan-201ENSMUST00000002412 Gm10024A0A0A0MQA4 119 aa4.55□□□□□ -1.68
Ncan-201ENSMUST00000002412 Sprr2iO70560 76 aa4.55□□□□□ -1.68
Ncan-201ENSMUST00000002412 Vps13dB1ART2 4390 aa4.55□□□□□ -1.68
Ncan-201ENSMUST00000002412 Krtap19-3Q925H6 87 aa4.53□□□□□ -1.68
Ncan-201ENSMUST00000002412 PrkdcP97313 4128 aa4.53□□□□□ -1.68
Ncan-201ENSMUST00000002412 Dnah6E9Q0B6 4144 aa4.5□□□□□ -1.69
Ncan-201ENSMUST00000002412 Krtap9-5A2A5X3 358 aa4.49□□□□□ -1.69
Ncan-201ENSMUST00000002412 Stard9Q80TF6 4561 aa4.49□□□□□ -1.69
Ncan-201ENSMUST00000002412 ApobE9Q414 4505 aa4.45□□□□□ -1.7
Ncan-201ENSMUST00000002412 Sprr2eO70556 76 aa4.43□□□□□ -1.7
Ncan-201ENSMUST00000002412 PlecQ9QXS1 4691 aaKnown RBP4.42□□□□□ -1.7
Ncan-201ENSMUST00000002412 Lce1mQ9CR91 182 aa4.4□□□□□ -1.71
Ncan-201ENSMUST00000002412 Dnah9B1AR51 4484 aa4.39□□□□□ -1.71
Ncan-201ENSMUST00000002412 Vps13bQ80TY5 3993 aa4.38□□□□□ -1.71
Ncan-201ENSMUST00000002412 SacsQ9JLC8 4582 aa4.37□□□□□ -1.71
Ncan-201ENSMUST00000002412 Krtap22-2J3QNX6 67 aa4.36□□□□□ -1.71
Ncan-201ENSMUST00000002412 Dnah1E9Q8T7 4250 aa4.34□□□□□ -1.71
Ncan-201ENSMUST00000002412 Dync2h1Q45VK7 4306 aa4.33□□□□□ -1.72
Ncan-201ENSMUST00000002412 Lce1fB9EJP6 147 aa4.31□□□□□ -1.72
Ncan-201ENSMUST00000002412 Lce1cQ9D1C5 147 aa4.31□□□□□ -1.72
Ncan-201ENSMUST00000002412 Lce1lQ9D1G7 135 aa4.31□□□□□ -1.72
Ncan-201ENSMUST00000002412 Lce1dQ9D731 133 aa4.31□□□□□ -1.72
Ncan-201ENSMUST00000002412 Dnah3Q8BW94 4083 aa4.31□□□□□ -1.72
Ncan-201ENSMUST00000002412 Krtap16-3Q8C1I6 86 aa4.3□□□□□ -1.72
Ncan-201ENSMUST00000002412 Lce1eQ9D139 143 aa4.3□□□□□ -1.72
Ncan-201ENSMUST00000002412 Lce1bQ9D149 137 aa4.29□□□□□ -1.72
Ncan-201ENSMUST00000002412 Hectd4E9Q2E4 4418 aa4.28□□□□□ -1.72
Ncan-201ENSMUST00000002412 TnxbO35452 4006 aa4.26□□□□□ -1.73
Ncan-201ENSMUST00000002412 Fras1Q80T14 4010 aa4.26□□□□□ -1.73
Ncan-201ENSMUST00000002412 Lrp1bQ9JI18 4599 aa4.22□□□□□ -1.73
Ncan-201ENSMUST00000002412 Mt2P02798 61 aa4.22□□□□□ -1.73
Ncan-201ENSMUST00000002412 Fat1A0A1L1SQU7 4645 aa4.21□□□□□ -1.73
Ncan-201ENSMUST00000002412 Krtap19-2Q925I0 141 aa4.21□□□□□ -1.74
Ncan-201ENSMUST00000002412 Dnah7aE9Q0T8 4024 aa4.2□□□□□ -1.74
Ncan-201ENSMUST00000002412 Dnah7cA0A087WR13 4024 aa4.2□□□□□ -1.74
Ncan-201ENSMUST00000002412 Mycbp2Q7TPH6 4711 aa4.14□□□□□ -1.75
Ncan-201ENSMUST00000002412 Lrp1Q91ZX7 4545 aaKnown RBP4.13□□□□□ -1.75
Ncan-201ENSMUST00000002412 Fat3Q8BNA6 4555 aa4.12□□□□□ -1.75
Ncan-201ENSMUST00000002412 Dync1h1Q9JHU4 4644 aaKnown RBP4.12□□□□□ -1.75
Ncan-201ENSMUST00000002412 Krtap19-1Q925H2 87 aa4.11□□□□□ -1.75
Ncan-201ENSMUST00000002412 Dnah8Q91XQ0 4731 aa4.1□□□□□ -1.75
Ncan-201ENSMUST00000002412 Krtap9-3Q3V2C1 136 aa4.07□□□□□ -1.76
Ncan-201ENSMUST00000002412 Sprr2dO70555 85 aa4.06□□□□□ -1.76
Ncan-201ENSMUST00000002412 Pkd1O08852 4293 aa4.03□□□□□ -1.76
Ncan-201ENSMUST00000002412 Prm1P02319 51 aa4.02□□□□□ -1.77
Ncan-201ENSMUST00000002412 Fat2Q5F226 4351 aa4.01□□□□□ -1.77
Ncan-201ENSMUST00000002412 Krtap31-1Q9D644 177 aa3.97□□□□□ -1.77
Ncan-201ENSMUST00000002412 Sprr2hO70559 108 aa3.95□□□□□ -1.78
Ncan-201ENSMUST00000002412 Krtap19-4Q925H7 84 aa3.95□□□□□ -1.78
Ncan-201ENSMUST00000002412 Ryr1E9PZQ0 5035 aa3.9□□□□□ -1.78
Ncan-201ENSMUST00000002412 Mt4P47945 62 aa3.89□□□□□ -1.79
Ncan-201ENSMUST00000002412 Krtap4-16Q91W93 202 aa3.86□□□□□ -1.79
Ncan-201ENSMUST00000002412 Pkhd1E9PZ36 4059 aa3.81□□□□□ -1.8
Ncan-201ENSMUST00000002412 Lrp2A2ARV4 4660 aa3.81□□□□□ -1.8
Ncan-201ENSMUST00000002412 Krtap1-3A2A588 173 aa3.8□□□□□ -1.8
Ncan-201ENSMUST00000002412 Krtap4-2B1AQ85 167 aa3.79□□□□□ -1.8
Ncan-201ENSMUST00000002412 Gm7735D3YX18 52 aa3.79□□□□□ -1.8
Ncan-201ENSMUST00000002412 Sprr2bO70554 98 aa3.73□□□□□ -1.81
Ncan-201ENSMUST00000002412 Ryr3A2AGL3 4863 aa3.72□□□□□ -1.81
Ncan-201ENSMUST00000002412 Lce1kJ3QP15 125 aa3.72□□□□□ -1.81
Ncan-201ENSMUST00000002412 Lce1a1Q9CQH5 143 aa3.71□□□□□ -1.82
Ncan-201ENSMUST00000002412 Lce1a2Q9D1K4 149 aa3.71□□□□□ -1.82
Ncan-201ENSMUST00000002412 Gm11569B1AQB1 180 aa3.7□□□□□ -1.82
Ncan-201ENSMUST00000002412 Pkhd1l1Q80ZA4 4249 aa3.7□□□□□ -1.82
Ncan-201ENSMUST00000002412 Dnhd1D3Z2X2 4750 aa3.68□□□□□ -1.82
Ncan-201ENSMUST00000002412 Kmt2cQ8BRH4 4903 aa3.67□□□□□ -1.82
Ncan-201ENSMUST00000002412 Krtap31-2Q8CAY5 177 aa3.67□□□□□ -1.82
Ncan-201ENSMUST00000002412 Gm9789Q8BIG3 52 aa3.66□□□□□ -1.82
Ncan-201ENSMUST00000002412 Krtap4-6Q3V4B7 195 aa3.62□□□□□ -1.83
Ncan-201ENSMUST00000002412 Gm10061D3Z714 54 aa3.61□□□□□ -1.83
Ncan-201ENSMUST00000002412 Gm11938Q9D3H4 131 aa3.59□□□□□ -1.83
Ncan-201ENSMUST00000002412 HydinQ80W93 5154 aa3.57□□□□□ -1.84
Ncan-201ENSMUST00000002412 Gm11562A0PK51 136 aa3.55□□□□□ -1.84
Ncan-201ENSMUST00000002412 Syne1Q6ZWR6 8799 aa3.54□□□□□ -1.84
Ncan-201ENSMUST00000002412 Herc2Q4U2R1 4836 aa3.53□□□□□ -1.84
Ncan-201ENSMUST00000002412 Kiaa1109A2AAE1 5005 aa3.53□□□□□ -1.84
Ncan-201ENSMUST00000002412 Ryr2E9Q401 4966 aaKnown RBP3.51□□□□□ -1.85
Ncan-201ENSMUST00000002412 Herc1E9PZP8 4859 aa3.48□□□□□ -1.85
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms