RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Fras1Q80T14 4010 aa3.96□□□□□ -1.78
Ccdc47-201ENSMUST00000002043 Krtap1-5A2A590 122 aa3.96□□□□□ -1.78
Ccdc47-201ENSMUST00000002043 Gm18596A0A1W2P860 280 aa3.94□□□□□ -1.78
Ccdc47-201ENSMUST00000002043 Dnah7bL7N1Y0 4068 aa3.93□□□□□ -1.78
Ccdc47-201ENSMUST00000002043 Krtap19-9aF8WH65 55 aa3.91□□□□□ -1.78
Ccdc47-201ENSMUST00000002043 A030014E15RikA0A1Y7VJV2 120 aa3.89□□□□□ -1.79
Ccdc47-201ENSMUST00000002043 Dnah17Q69Z23 4481 aa3.89□□□□□ -1.79
Ccdc47-201ENSMUST00000002043 Krtap19-9bQ99NG9 58 aa3.89□□□□□ -1.79
Ccdc47-201ENSMUST00000002043 Krtap7-1Q9D3I6 87 aa3.89□□□□□ -1.79
Ccdc47-201ENSMUST00000002043 Dnah7aE9Q0T8 4024 aa3.88□□□□□ -1.79
Ccdc47-201ENSMUST00000002043 Dnah7cA0A087WR13 4024 aa3.87□□□□□ -1.79
Ccdc47-201ENSMUST00000002043 Krtap8-1O08633 61 aa3.85□□□□□ -1.79
Ccdc47-201ENSMUST00000002043 Crct1Q6PAI5 102 aa3.85□□□□□ -1.79
Ccdc47-201ENSMUST00000002043 Gm10318A0A1W2P728 225 aa3.85□□□□□ -1.79
Ccdc47-201ENSMUST00000002043 Gm6358A0A087WPH4 74 aa3.83□□□□□ -1.8
Ccdc47-201ENSMUST00000002043 Dnah9B1AR51 4484 aa3.83□□□□□ -1.8
Ccdc47-201ENSMUST00000002043 Dnah11E9Q7N9 4488 aa3.83□□□□□ -1.8
Ccdc47-201ENSMUST00000002043 Vps13dB1ART2 4390 aa3.83□□□□□ -1.8
Ccdc47-201ENSMUST00000002043 PrkdcP97313 4128 aa3.82□□□□□ -1.8
Ccdc47-201ENSMUST00000002043 Krtap1-4Q3V2D6 188 aa3.8□□□□□ -1.8
Ccdc47-201ENSMUST00000002043 Hectd4E9Q2E4 4418 aa3.79□□□□□ -1.8
Ccdc47-201ENSMUST00000002043 Dnah10D3YYQ8 4591 aa3.78□□□□□ -1.8
Ccdc47-201ENSMUST00000002043 Pkhd1E9PZ36 4059 aa3.77□□□□□ -1.81
Ccdc47-201ENSMUST00000002043 Muc6Q80T03 2850 aa3.76□□□□□ -1.81
Ccdc47-201ENSMUST00000002043 Krtap4-2B1AQ85 167 aa3.74□□□□□ -1.81
Ccdc47-201ENSMUST00000002043 Vps13bQ80TY5 3993 aa3.73□□□□□ -1.81
Ccdc47-201ENSMUST00000002043 TnxbO35452 4006 aa3.71□□□□□ -1.82
Ccdc47-201ENSMUST00000002043 Dnah14A0A140LIJ4 4489 aa3.71□□□□□ -1.82
Ccdc47-201ENSMUST00000002043 Dnah2P0C6F1 4456 aa3.7□□□□□ -1.82
Ccdc47-201ENSMUST00000002043 Sprr2kO70562 68 aa3.68□□□□□ -1.82
Ccdc47-201ENSMUST00000002043 Krtap12-1Q9Z287 130 aa3.68□□□□□ -1.82
Ccdc47-201ENSMUST00000002043 Pkd1O08852 4293 aa3.67□□□□□ -1.82
Ccdc47-201ENSMUST00000002043 Lce1mQ9CR91 182 aa3.65□□□□□ -1.82
Ccdc47-201ENSMUST00000002043 Gm19402J3QJV4 266 aa3.61□□□□□ -1.83
Ccdc47-201ENSMUST00000002043 ApobE9Q414 4505 aa3.6□□□□□ -1.83
Ccdc47-201ENSMUST00000002043 Huwe1Q7TMY8 4377 aaKnown RBP3.59□□□□□ -1.83
Ccdc47-201ENSMUST00000002043 PlecQ9QXS1 4691 aaKnown RBP3.56□□□□□ -1.84
Ccdc47-201ENSMUST00000002043 Sprr2gO70558 76 aa3.54□□□□□ -1.84
Ccdc47-201ENSMUST00000002043 Stard9Q80TF6 4561 aa3.54□□□□□ -1.84
Ccdc47-201ENSMUST00000002043 Dnah5Q8VHE6 4621 aa3.52□□□□□ -1.85
Ccdc47-201ENSMUST00000002043 Pkhd1l1Q80ZA4 4249 aa3.52□□□□□ -1.85
Ccdc47-201ENSMUST00000002043 LorP18165 486 aa3.52□□□□□ -1.85
Ccdc47-201ENSMUST00000002043 Fat2Q5F226 4351 aa3.51□□□□□ -1.85
Ccdc47-201ENSMUST00000002043 2310046K23RikA0A0A6YVW6 87 aa3.5□□□□□ -1.85
Ccdc47-201ENSMUST00000002043 Prm1P02319 51 aa3.49□□□□□ -1.85
Ccdc47-201ENSMUST00000002043 Ryr1E9PZQ0 5035 aa3.44□□□□□ -1.86
Ccdc47-201ENSMUST00000002043 Gm10100J3QK64 120 aa3.43□□□□□ -1.86
Ccdc47-201ENSMUST00000002043 Lce3bQ9CQM7 98 aa3.41□□□□□ -1.86
Ccdc47-201ENSMUST00000002043 Ryr3A2AGL3 4863 aa3.4□□□□□ -1.86
Ccdc47-201ENSMUST00000002043 SacsQ9JLC8 4582 aa3.4□□□□□ -1.86
Ccdc47-201ENSMUST00000002043 Lce3cQ91V05 98 aa3.4□□□□□ -1.87
Ccdc47-201ENSMUST00000002043 Gm10142J3KMP7 120 aa3.35□□□□□ -1.87
Ccdc47-201ENSMUST00000002043 Lrp1bQ9JI18 4599 aa3.34□□□□□ -1.88
Ccdc47-201ENSMUST00000002043 Gm7735D3YX18 52 aa3.32□□□□□ -1.88
Ccdc47-201ENSMUST00000002043 Gm10272F7CZ33 110 aa3.31□□□□□ -1.88
Ccdc47-201ENSMUST00000002043 Lce3eF8VQJ0 98 aa3.29□□□□□ -1.88
Ccdc47-201ENSMUST00000002043 Lce3fQ6PAI4 98 aa3.29□□□□□ -1.88
Ccdc47-201ENSMUST00000002043 Krtap22-2J3QNX6 67 aa3.29□□□□□ -1.88
Ccdc47-201ENSMUST00000002043 Lce3dE9Q8V1 98 aa3.28□□□□□ -1.88
Ccdc47-201ENSMUST00000002043 Krtap9-5A2A5X3 358 aa3.28□□□□□ -1.88
Ccdc47-201ENSMUST00000002043 Ryr2E9Q401 4966 aaKnown RBP3.26□□□□□ -1.89
Ccdc47-201ENSMUST00000002043 Fat1A0A1L1SQU7 4645 aa3.25□□□□□ -1.89
Ccdc47-201ENSMUST00000002043 Krtap19-3Q925H6 87 aa3.25□□□□□ -1.89
Ccdc47-201ENSMUST00000002043 Krtap16-3Q8C1I6 86 aa3.23□□□□□ -1.89
Ccdc47-201ENSMUST00000002043 A0A286YCP9 139 aa3.22□□□□□ -1.89
Ccdc47-201ENSMUST00000002043 Lce3aQ497I5 98 aa3.22□□□□□ -1.89
Ccdc47-201ENSMUST00000002043 Dync1h1Q9JHU4 4644 aaKnown RBP3.22□□□□□ -1.89
Ccdc47-201ENSMUST00000002043 Lrp1Q91ZX7 4545 aaKnown RBP3.21□□□□□ -1.9
Ccdc47-201ENSMUST00000002043 Kmt2cQ8BRH4 4903 aa3.21□□□□□ -1.9
Ccdc47-201ENSMUST00000002043 Krtap19-1Q925H2 87 aa3.19□□□□□ -1.9
Ccdc47-201ENSMUST00000002043 Krtap17-1A2A5X6 109 aa3.19□□□□□ -1.9
Ccdc47-201ENSMUST00000002043 Mt2P02798 61 aa3.19□□□□□ -1.9
Ccdc47-201ENSMUST00000002043 Herc2Q4U2R1 4836 aa3.17□□□□□ -1.9
Ccdc47-201ENSMUST00000002043 Dnah8Q91XQ0 4731 aa3.16□□□□□ -1.9
Ccdc47-201ENSMUST00000002043 Sprr2iO70560 76 aa3.15□□□□□ -1.9
Ccdc47-201ENSMUST00000002043 Gm9789Q8BIG3 52 aa3.15□□□□□ -1.9
Ccdc47-201ENSMUST00000002043 Dnhd1D3Z2X2 4750 aa3.14□□□□□ -1.91
Ccdc47-201ENSMUST00000002043 PcloQ9QYX7 5068 aa3.13□□□□□ -1.91
Ccdc47-201ENSMUST00000002043 Krtap19-4Q925H7 84 aa3.13□□□□□ -1.91
Ccdc47-201ENSMUST00000002043 Mycbp2Q7TPH6 4711 aa3.13□□□□□ -1.91
Ccdc47-201ENSMUST00000002043 Gm10024A0A0A0MQA4 119 aa3.11□□□□□ -1.91
Ccdc47-201ENSMUST00000002043 Kiaa1109A2AAE1 5005 aa3.11□□□□□ -1.91
Ccdc47-201ENSMUST00000002043 HydinQ80W93 5154 aa3.09□□□□□ -1.92
Ccdc47-201ENSMUST00000002043 Birc6O88738 4882 aa3.08□□□□□ -1.92
Ccdc47-201ENSMUST00000002043 Krtap19-2Q925I0 141 aa3.07□□□□□ -1.92
Ccdc47-201ENSMUST00000002043 Abca13Q5SSE9 5034 aa3.07□□□□□ -1.92
Ccdc47-201ENSMUST00000002043 Krtap9-3Q3V2C1 136 aa3.06□□□□□ -1.92
Ccdc47-201ENSMUST00000002043 Lce1gQ9D195 139 aa3.05□□□□□ -1.92
Ccdc47-201ENSMUST00000002043 Sprr2eO70556 76 aa3.05□□□□□ -1.92
Ccdc47-201ENSMUST00000002043 Gm11569B1AQB1 180 aa3.05□□□□□ -1.92
Ccdc47-201ENSMUST00000002043 Herc1E9PZP8 4859 aa3.03□□□□□ -1.92
Ccdc47-201ENSMUST00000002043 Fat3Q8BNA6 4555 aa3.03□□□□□ -1.92
Ccdc47-201ENSMUST00000002043 Lce1fB9EJP6 147 aa3.03□□□□□ -1.92
Ccdc47-201ENSMUST00000002043 Lce1cQ9D1C5 147 aa3.03□□□□□ -1.92
Ccdc47-201ENSMUST00000002043 Lce1lQ9D1G7 135 aa3.03□□□□□ -1.92
Ccdc47-201ENSMUST00000002043 Lce1dQ9D731 133 aa3.03□□□□□ -1.92
Ccdc47-201ENSMUST00000002043 Gm38119A0A0A6YX29 146 aa3.01□□□□□ -1.93
Ccdc47-201ENSMUST00000002043 Gm11562A0PK51 136 aa3.01□□□□□ -1.93
Ccdc47-201ENSMUST00000002043 Sprr2fO70557 76 aa3.01□□□□□ -1.93
Ccdc47-201ENSMUST00000002043 Lrp2A2ARV4 4660 aa3□□□□□ -1.93
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms