RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W SAP185P40856 1058 aa2.51□□□□□ -2.01
UBP15YMR304W ADA2Q02336 434 aa2.51□□□□□ -2.01
UBP15YMR304W ADE13Q05911 482 aaKnown RBP2.51□□□□□ -2.01
UBP15YMR304W DTD1Q07648 150 aaKnown RBP2.51□□□□□ -2.01
UBP15YMR304W TLG2Q08144 397 aa2.51□□□□□ -2.01
UBP15YMR304W FRE8Q12209 686 aa2.51□□□□□ -2.01
UBP15YMR304W SSB1P11484 613 aaKnown RBP2.5□□□□□ -2.01
UBP15YMR304W PHO3P24031 467 aa2.5□□□□□ -2.01
UBP15YMR304W AAD3P25612 363 aa2.5□□□□□ -2.01
UBP15YMR304W GCG1P32656 232 aaKnown RBP2.5□□□□□ -2.01
UBP15YMR304W RFT1P38206 574 aaPredicted RBP2.5□□□□□ -2.01
UBP15YMR304W SSB2P40150 613 aaKnown RBP2.5□□□□□ -2.01
UBP15YMR304W RHO3Q00245 231 aaKnown RBP2.5□□□□□ -2.01
UBP15YMR304W MUB1Q03162 620 aa2.5□□□□□ -2.01
UBP15YMR304W YMR187CQ03236 431 aa2.5□□□□□ -2.01
UBP15YMR304W SNX41Q04053 625 aa2.5□□□□□ -2.01
UBP15YMR304W RTK1Q12100 620 aaPredicted RBP2.5□□□□□ -2.01
UBP15YMR304W LAG2Q92325 660 aa2.5□□□□□ -2.01
UBP15YMR304W ATE1P16639 503 aa2.5□□□□□ -2.01
UBP15YMR304W RGP1P16664 663 aa2.5□□□□□ -2.01
UBP15YMR304W PRO3P32263 286 aaKnown RBP2.5□□□□□ -2.01
UBP15YMR304W MET4P32389 672 aa2.5□□□□□ -2.01
UBP15YMR304W YBL055CP34220 418 aaPredicted RBP2.5□□□□□ -2.01
UBP15YMR304W SLD2P34252 453 aa2.5□□□□□ -2.01
UBP15YMR304W KAE1P36132 386 aa2.5□□□□□ -2.01
UBP15YMR304W ECM4P36156 370 aa2.5□□□□□ -2.01
UBP15YMR304W CCL1P37366 393 aa2.5□□□□□ -2.01
UBP15YMR304W SPP381P38282 291 aaPredicted RBP2.5□□□□□ -2.01
UBP15YMR304W YHR182WP38870 785 aa2.5□□□□□ -2.01
UBP15YMR304W MNN1P39106 762 aa2.5□□□□□ -2.01
UBP15YMR304W RIC1P40395 1056 aa2.5□□□□□ -2.01
UBP15YMR304W OPT1P40897 799 aa2.5□□□□□ -2.01
UBP15YMR304W SPC105P53148 917 aa2.5□□□□□ -2.01
UBP15YMR304W BRE5P53741 515 aaKnown RBP2.5□□□□□ -2.01
UBP15YMR304W MNT4P53745 580 aa2.5□□□□□ -2.01
UBP15YMR304W GOR1P53839 350 aa2.5□□□□□ -2.01
UBP15YMR304W COG5P53951 403 aa2.5□□□□□ -2.01
UBP15YMR304W RPL34AP87262 121 aaPredicted RBP2.5□□□□□ -2.01
UBP15YMR304W RAD30Q04049 632 aa2.5□□□□□ -2.01
UBP15YMR304W REC8Q12188 680 aa2.5□□□□□ -2.01
UBP15YMR304W RTR2Q12378 196 aa2.5□□□□□ -2.01
UBP15YMR304W DGK1Q12382 290 aa2.5□□□□□ -2.01
UBP15YMR304W TRM11Q12463 433 aa2.5□□□□□ -2.01
UBP15YMR304W YOL098CQ12496 1037 aa2.5□□□□□ -2.01
UBP15YMR304W CBP2P03874 630 aaPredicted RBP2.5□□□□□ -2.01
UBP15YMR304W SBP1P10080 294 aaKnown RBP2.5□□□□□ -2.01
UBP15YMR304W PRI2P20457 528 aa2.5□□□□□ -2.01
UBP15YMR304W PRP28P23394 588 aa2.5□□□□□ -2.01
UBP15YMR304W HXT2P23585 541 aa2.5□□□□□ -2.01
UBP15YMR304W KRR1P25586 316 aaPredicted RBP2.5□□□□□ -2.01
UBP15YMR304W RRP1P35178 278 aaPredicted RBP2.5□□□□□ -2.01
UBP15YMR304W MIC60P36112 540 aa2.5□□□□□ -2.01
UBP15YMR304W YHI9P38765 294 aa2.5□□□□□ -2.01
UBP15YMR304W ALB1P47019 175 aaPredicted RBP2.5□□□□□ -2.01
UBP15YMR304W ENT3P47160 408 aa2.5□□□□□ -2.01
UBP15YMR304W ROM1P53046 1155 aa2.5□□□□□ -2.01
UBP15YMR304W LCL3P53153 274 aa2.5□□□□□ -2.01
UBP15YMR304W OCA2P53949 197 aa2.5□□□□□ -2.01
UBP15YMR304W VID22Q05934 901 aa2.5□□□□□ -2.01
UBP15YMR304W BUR2Q05949 395 aa2.5□□□□□ -2.01
UBP15YMR304W RGC1Q06108 1083 aaKnown RBP2.5□□□□□ -2.01
UBP15YMR304W FUR4P05316 633 aaKnown RBP2.49□□□□□ -2.01
UBP15YMR304W AMD2P22580 549 aa2.49□□□□□ -2.01
UBP15YMR304W OCA4P25366 362 aa2.49□□□□□ -2.01
UBP15YMR304W CDC3P32457 520 aaKnown RBP2.49□□□□□ -2.01
UBP15YMR304W HXT1P32465 570 aa2.49□□□□□ -2.01
UBP15YMR304W SUV3P32580 737 aa2.49□□□□□ -2.01
UBP15YMR304W PTH2P34222 208 aa2.49□□□□□ -2.01
UBP15YMR304W MRPL17P36528 281 aa2.49□□□□□ -2.01
UBP15YMR304W AKL1P38080 1108 aaKnown RBP2.49□□□□□ -2.01
UBP15YMR304W RRF1P38771 230 aa2.49□□□□□ -2.01
UBP15YMR304W PEX28P38848 579 aa2.49□□□□□ -2.01
UBP15YMR304W VAC8P39968 578 aa2.49□□□□□ -2.01
UBP15YMR304W YER137CP40083 148 aaKnown RBP2.49□□□□□ -2.01
UBP15YMR304W ALG5P40350 334 aa2.49□□□□□ -2.01
UBP15YMR304W YFL066CP43538 392 aa2.49□□□□□ -2.01
UBP15YMR304W DAK2P43550 591 aa2.49□□□□□ -2.01
UBP15YMR304W TMA22P47089 198 aaPredicted RBP2.49□□□□□ -2.01
UBP15YMR304W RAD17P48581 401 aa2.49□□□□□ -2.01
UBP15YMR304W SDA1P53313 767 aaKnown RBP2.49□□□□□ -2.01
UBP15YMR304W PFA5Q03289 374 aa2.49□□□□□ -2.01
UBP15YMR304W SPO20Q04359 397 aa2.49□□□□□ -2.01
UBP15YMR304W YMR018WQ04364 514 aa2.49□□□□□ -2.01
UBP15YMR304W SOV1Q04748 898 aa2.49□□□□□ -2.01
UBP15YMR304W OCA6Q12454 224 aa2.49□□□□□ -2.01
UBP15YMR304W TOM70P07213 617 aaKnown RBP2.49□□□□□ -2.01
UBP15YMR304W ATP1P07251 545 aaKnown RBP2.49□□□□□ -2.01
UBP15YMR304W KGD2P19262 463 aaPredicted RBP2.49□□□□□ -2.01
UBP15YMR304W RNR3P21672 869 aaKnown RBP2.49□□□□□ -2.01
UBP15YMR304W CMK2P22517 447 aa2.49□□□□□ -2.01
UBP15YMR304W POL4P25615 582 aa2.49□□□□□ -2.01
UBP15YMR304W CDC50P25656 391 aa2.49□□□□□ -2.01
UBP15YMR304W ORC2P32833 620 aa2.49□□□□□ -2.01
UBP15YMR304W CPR5P35176 225 aa2.49□□□□□ -2.01
UBP15YMR304W NCL1P38205 684 aaKnown RBP2.49□□□□□ -2.01
UBP15YMR304W MSR1P38714 643 aa2.49□□□□□ -2.01
UBP15YMR304W GOS1P38736 223 aa2.49□□□□□ -2.01
UBP15YMR304W GIM4P40005 111 aaKnown RBP2.49□□□□□ -2.01
UBP15YMR304W YTA12P40341 825 aa2.49□□□□□ -2.01
UBP15YMR304W DIP5P53388 608 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms