RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	SUC2	P00724	532 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.85	□□□□□ -1.79	not detected
RPO21	YDL140C	YGL041W-A	P0C5N3	154 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	STE4	P18851	423 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	HOP1	P20050	605 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	GRX7	P38068	203 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	VMA10	P48836	114 aa	Known RBP	3.85	□□□□□ -1.79
RPO21	YDL140C	CWC22	P53333	577 aa	Known RBP	3.85	□□□□□ -1.79
RPO21	YDL140C	LGE1	Q02796	332 aa	Known RBP	3.85	□□□□□ -1.79
RPO21	YDL140C	UBP16	Q02863	499 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	NBP2	Q12163	236 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	YPR089W	O13585	888 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.85	□□□□□ -1.79	not detected
RPO21	YDL140C	ADE2	P21264	571 aa	Known RBP	3.85	□□□□□ -1.79
RPO21	YDL140C	PWP1	P21304	576 aa	Known RBP	3.85	□□□□□ -1.79
RPO21	YDL140C	TFB1	P32776	642 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	MAL33	P38157	468 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	NDT80	P38830	627 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	SAP1	P39955	897 aa	Known RBP	3.85	□□□□□ -1.79
RPO21	YDL140C	YGR053C	P53234	283 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	GTR1	Q00582	310 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	PTA1	Q01329	785 aa	Predicted RBP	3.85	□□□□□ -1.79
RPO21	YDL140C	MYO5	Q04439	1219 aa	Known RBP	3.85	□□□□□ -1.79
RPO21	YDL140C	IRC25	Q07951	179 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	BEM3	P32873	1128 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	YPT52	P36018	234 aa	Known RBP	3.84	□□□□□ -1.79
RPO21	YDL140C	MNT3	P40549	630 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	INA22	P40576	216 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	UTP6	Q02354	440 aa	Known RBP	3.84	□□□□□ -1.79
RPO21	YDL140C	TDA9	Q04545	1251 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	IRC23	Q08416	157 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	BUD7	Q08754	746 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	CIR2	Q08822	631 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	COR1	P07256	457 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	RPS19A	P07280	144 aa	Known RBP	3.84	□□□□□ -1.79
RPO21	YDL140C	RPS19B	P07281	144 aa	Predicted RBP	3.84	□□□□□ -1.79
RPO21	YDL140C	CDC6	P09119	513 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	KEX2	P13134	814 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	DPB3	P27344	201 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	HXT4	P32467	576 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	RAD23	P32628	398 aa	Known RBP	3.84	□□□□□ -1.79
RPO21	YDL140C	UBP11	P36026	717 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	FIS1	P40515	155 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	OPT1	P40897	799 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	APT1	P49435	187 aa	Known RBP	3.84	□□□□□ -1.79
RPO21	YDL140C	MND1	P53102	219 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	ORC3	P54790	616 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	ADA2	Q02336	434 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	YMR010W	Q03687	405 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	TAF9	Q05027	157 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	FUS2	Q05670	677 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	YLR326W	Q06170	240 aa	Known RBP	3.84	□□□□□ -1.79
RPO21	YDL140C	CDA2	Q06703	312 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	ERP3	Q12403	225 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	SPE1	P08432	466 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	AIM17	P23180	465 aa	Known RBP	3.84	□□□□□ -1.79
RPO21	YDL140C	WBP1	P33767	430 aa	Known RBP	3.84	□□□□□ -1.79
RPO21	YDL140C	MAL32	P38158	584 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	RPS20	P38701	121 aa	Known RBP	3.84	□□□□□ -1.79
RPO21	YDL140C	MIP6	P38760	659 aa	Known RBP	3.84	□□□□□ -1.79
RPO21	YDL140C	SEC9	P40357	651 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	YDL186W	P48568	277 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	TAN1	P53072	289 aa	Predicted RBP	3.84	□□□□□ -1.79
RPO21	YDL140C	EMI2	Q04409	500 aa	Known RBP	3.84	□□□□□ -1.79
RPO21	YDL140C	CIA1	Q05583	330 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	BLS1	Q06071	122 aa		3.84	□□□□□ -1.79
RPO21	YDL140C	GPA2	P10823	449 aa		3.84	□□□□□ -1.8
RPO21	YDL140C	SPR1	P32603	445 aa		3.84	□□□□□ -1.8
RPO21	YDL140C	SEF1	P34228	1148 aa		3.84	□□□□□ -1.8
RPO21	YDL140C	SCD5	P34758	872 aa		3.84	□□□□□ -1.8
RPO21	YDL140C	TDA3	P38758	523 aa		3.84	□□□□□ -1.8
RPO21	YDL140C	YJL206C	P39529	758 aa		3.84	□□□□□ -1.8
RPO21	YDL140C	FRT2	P39734	528 aa		3.84	□□□□□ -1.8
RPO21	YDL140C	LTP1	P40347	161 aa		3.84	□□□□□ -1.8
RPO21	YDL140C	YMR018W	Q04364	514 aa		3.84	□□□□□ -1.8
RPO21	YDL140C	SIL1	Q08199	421 aa		3.84	□□□□□ -1.8
RPO21	YDL140C	Q0010	Q9ZZX9	128 aa		3.84	□□□□□ -1.8
RPO21	YDL140C	APE1	P14904	514 aa		3.83	□□□□□ -1.8
RPO21	YDL140C	PET123	P17558	318 aa		3.83	□□□□□ -1.8
RPO21	YDL140C	DEF1	P35732	738 aa	Known RBP	3.83	□□□□□ -1.8
RPO21	YDL140C	TRM7	P38238	310 aa	Known RBP	3.83	□□□□□ -1.8
RPO21	YDL140C	NAM8	Q00539	523 aa	Known RBP	3.83	□□□□□ -1.8
RPO21	YDL140C	NOC4	Q06512	552 aa	Predicted RBP	3.83	□□□□□ -1.8
RPO21	YDL140C	YOR214C	Q12282	236 aa		3.83	□□□□□ -1.8
RPO21	YDL140C	NPP1	P25353	742 aa		3.83	□□□□□ -1.8
RPO21	YDL140C	BEM1	P29366	551 aa		3.83	□□□□□ -1.8
RPO21	YDL140C	CCR4	P31384	837 aa	Known RBP	3.83	□□□□□ -1.8
RPO21	YDL140C	MRPL15	P36523	253 aa		3.83	□□□□□ -1.8
RPO21	YDL140C	SSN3	P39073	555 aa		3.83	□□□□□ -1.8
RPO21	YDL140C	TMN3	P40071	706 aa		3.83	□□□□□ -1.8
RPO21	YDL140C	RIC1	P40395	1056 aa		3.83	□□□□□ -1.8
RPO21	YDL140C	GDS1	P41913	522 aa		3.83	□□□□□ -1.8
RPO21	YDL140C	NOP9	P47077	666 aa	Known RBP	3.83	□□□□□ -1.8
RPO21	YDL140C	BCH1	Q05029	724 aa		3.83	□□□□□ -1.8
RPO21	YDL140C	DUS3	Q06053	668 aa	Known RBP	3.83	□□□□□ -1.8
RPO21	YDL140C	YFT2	Q06676	274 aa		3.83	□□□□□ -1.8
RPO21	YDL140C	DAP1	Q12091	152 aa		3.83	□□□□□ -1.8
RPO21	YDL140C	YLL056C	Q12177	298 aa		3.83	□□□□□ -1.8
RPO21	YDL140C	YOR111W	Q99210	232 aa		3.83	□□□□□ -1.8
RPO21	YDL140C	NUP1	P20676	1076 aa		3.83	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms