RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 PIK3R5Q8WYR1 880 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 LRRC59Q96AG4 307 aaKnown RBP9.19□□□□□ -0.94
NECAP1-227ENST00000640648 TEX13AQ9BXU3 409 aaPredicted RBP9.19□□□□□ -0.94
NECAP1-227ENST00000640648 NKIRAS1Q9NYS0 192 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 PYCARDQ9ULZ3 195 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 AOX1Q06278 1338 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 PLEKHG2Q9H7P9 1386 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 ADGRL2O95490 1459 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 LIN7AO14910 233 aaPredicted RBP9.19□□□□□ -0.94
NECAP1-227ENST00000640648 HNRNPH1P31943 449 aaKnown RBP9.19□□□□□ -0.94
NECAP1-227ENST00000640648 IGHMBP2P38935 993 aaKnown RBP9.19□□□□□ -0.94
NECAP1-227ENST00000640648 NOP2P46087 812 aaKnown RBP9.19□□□□□ -0.94
NECAP1-227ENST00000640648 KSR2Q6VAB6 950 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 NUP58Q9BVL2 599 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 IFNKQ9P0W0 207 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 TRMT112Q9UI30 125 aaKnown RBP9.19□□□□□ -0.94
NECAP1-227ENST00000640648 SCINQ9Y6U3 715 aa9.19□□□□□ -0.94
NECAP1-227ENST00000640648 DENND4BO75064 1496 aaPredicted RBP9.19□□□□□ -0.94
NECAP1-227ENST00000640648 ABLIM1O14639 778 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 HNRNPCL1O60812 293 aaKnown RBP9.18□□□□□ -0.94
NECAP1-227ENST00000640648 SUN1O94901 812 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 STARD3NLO95772 234 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 MAP3K12Q12852 859 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 EMBQ6PCB8 327 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 ARHGAP22Q7Z5H3 698 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 NCOA7Q8NI08 942 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 KLHDC4Q8TBB5 520 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 MIEF2Q96C03 454 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 PTPRTO14522 1441 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 IQCA1LA6NCM1 817 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 IL13P35225 146 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 KIAA0753Q2KHM9 967 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 MCMDC2Q4G0Z9 681 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 RUFY3Q7L099 469 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 EXOC1Q9NV70 894 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 NPATQ14207 1427 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 ATP2C2O75185 946 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 USP5P45974 858 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 SMTNP53814 917 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 HHATQ5VTY9 493 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 TRMT2AQ8IZ69 625 aaKnown RBP9.18□□□□□ -0.94
NECAP1-227ENST00000640648 BHMTQ93088 406 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 FGD4Q96M96 766 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 PARP2Q9UGN5 583 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 HDAC9Q9UKV0 1011 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 SNX14Q9Y5W7 946 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 CHGBP05060 677 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 VCAM1P19320 739 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 CHRNA2Q15822 529 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 C8orf74Q6P047 294 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 FAM186BQ8IYM0 893 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 ALG1Q9BT22 464 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 KLHL14Q9P2G3 628 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 PUF60Q9UHX1 559 aaKnown RBP9.18□□□□□ -0.94
NECAP1-227ENST00000640648 ZNF521Q96K83 1311 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 REREQ9P2R6 1566 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 PPP1R13BQ96KQ4 1090 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 IL1RAPL1Q9NZN1 696 aa9.18□□□□□ -0.94
NECAP1-227ENST00000640648 ATXN2Q99700 1313 aaKnown RBP9.17□□□□□ -0.94
NECAP1-227ENST00000640648 DISP1Q96F81 1524 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 PECAM1P16284 738 aaPredicted RBP9.17□□□□□ -0.94
NECAP1-227ENST00000640648 CCND1P24385 295 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 AFMP43652 599 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 MAP3K19Q56UN5 1328 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 THOC1Q96FV9 657 aaKnown RBP9.17□□□□□ -0.94
NECAP1-227ENST00000640648 FAM114A2Q9NRY5 505 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 STOML1Q9UBI4 398 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 RIMS2Q9UQ26 1411 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 KAT6BQ8WYB5 2073 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 PTPDC1A2A3K4 754 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 TARSL2A2RTX5 802 aaKnown RBP9.17□□□□□ -0.94
NECAP1-227ENST00000640648 ALDH1L1O75891 902 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 CASP8Q14790 479 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 CC2D2BQ6DHV5 1058 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 ACRBPQ8NEB7 543 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 USP33Q8TEY7 942 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 CCDC113Q9H0I3 377 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 TMOD3Q9NYL9 352 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 ADAMTS12P58397 1594 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 POLE2P56282 527 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 SLC44A4Q53GD3 710 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 VSIG1Q86XK7 387 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 LINS1Q8NG48 757 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 LLPHQ9BRT6 129 aaKnown RBP9.17□□□□□ -0.94
NECAP1-227ENST00000640648 ANGPTL2Q9UKU9 493 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 PALD1Q9ULE6 856 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 A0A1B0GVL5 298 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 KLHL33A6NCF5 533 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 PCYT1AP49585 367 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 GLE1Q53GS7 698 aaKnown RBP9.17□□□□□ -0.94
NECAP1-227ENST00000640648 GPT2Q8TD30 523 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 BICD1Q96G01 975 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 FAM227BQ96M60 508 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 HAUS4Q9H6D7 363 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 PDP2Q9P2J9 529 aa9.17□□□□□ -0.94
NECAP1-227ENST00000640648 ABCC1P33527 1531 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 RTL1A6NKG5 1358 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 SPTLC2O15270 562 aa9.16□□□□□ -0.94
NECAP1-227ENST00000640648 ACTN4O43707 911 aaKnown RBP9.16□□□□□ -0.94
NECAP1-227ENST00000640648 TCP1P17987 556 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms