RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 LETMD1Q6P1Q0 360 aa8.55□□□□□ -1.04
CCDC7-216ENST00000640058 SPACA3Q8IXA5 215 aa8.55□□□□□ -1.04
CCDC7-216ENST00000640058 MFSD2AQ8NA29 543 aa8.55□□□□□ -1.04
CCDC7-216ENST00000640058 TNKS2Q9H2K2 1166 aa8.55□□□□□ -1.04
CCDC7-216ENST00000640058 CAP2P40123 477 aa8.54□□□□□ -1.04
CCDC7-216ENST00000640058 PDE4BQ07343 736 aa8.54□□□□□ -1.04
CCDC7-216ENST00000640058 ZNF792Q3KQV3 632 aa8.54□□□□□ -1.04
CCDC7-216ENST00000640058 SNAP47Q5SQN1 464 aa8.54□□□□□ -1.04
CCDC7-216ENST00000640058 SFRP5Q5T4F7 317 aa8.54□□□□□ -1.04
CCDC7-216ENST00000640058 CBLL1Q75N03 491 aa8.54□□□□□ -1.04
CCDC7-216ENST00000640058 TMEM87BQ96K49 555 aa8.54□□□□□ -1.04
CCDC7-216ENST00000640058 RHOVQ96L33 236 aa8.54□□□□□ -1.04
CCDC7-216ENST00000640058 TMEM74Q96NL1 305 aa8.54□□□□□ -1.04
CCDC7-216ENST00000640058 MAPK8IP1Q9UQF2 711 aa8.54□□□□□ -1.04
CCDC7-216ENST00000640058 CBX7O95931 251 aa8.53□□□□□ -1.04
CCDC7-216ENST00000640058 ITGAEP38570 1179 aa8.53□□□□□ -1.04
CCDC7-216ENST00000640058 CDH24Q86UP0 819 aa8.53□□□□□ -1.04
CCDC7-216ENST00000640058 RSRP1Q9BUV0 290 aa8.53□□□□□ -1.04
CCDC7-216ENST00000640058 COPRSQ9NQ92 184 aa8.53□□□□□ -1.04
CCDC7-216ENST00000640058 KBTBD4Q9NVX7 518 aa8.53□□□□□ -1.04
CCDC7-216ENST00000640058 TACC3Q9Y6A5 838 aa8.53□□□□□ -1.04
CCDC7-216ENST00000640058 FAM155AB1AL88 458 aaPredicted RBP8.52□□□□□ -1.05
CCDC7-216ENST00000640058 CILPO75339 1184 aa8.52□□□□□ -1.05
CCDC7-216ENST00000640058 PLCG1P19174 1290 aa8.52□□□□□ -1.05
CCDC7-216ENST00000640058 FUT4P22083 530 aa8.52□□□□□ -1.05
CCDC7-216ENST00000640058 CDKAL1Q5VV42 579 aa8.52□□□□□ -1.05
CCDC7-216ENST00000640058 DIEXFQ68CQ4 756 aaKnown RBP8.52□□□□□ -1.05
CCDC7-216ENST00000640058 MRPL41Q8IXM3 137 aaKnown RBP8.52□□□□□ -1.05
CCDC7-216ENST00000640058 GATAD2BQ8WXI9 593 aa8.52□□□□□ -1.05
CCDC7-216ENST00000640058 ACSF2Q96CM8 615 aaPredicted RBP8.52□□□□□ -1.05
CCDC7-216ENST00000640058 PRDM7Q9NQW5 492 aa8.52□□□□□ -1.05
CCDC7-216ENST00000640058 FAM221AA4D161 298 aa8.51□□□□□ -1.05
CCDC7-216ENST00000640058 PAX4O43316 350 aa8.51□□□□□ -1.05
CCDC7-216ENST00000640058 GRIN3BO60391 1043 aa8.51□□□□□ -1.05
CCDC7-216ENST00000640058 IKZF1Q13422 519 aa8.51□□□□□ -1.05
CCDC7-216ENST00000640058 ANGEL2Q5VTE6 544 aaKnown RBP8.51□□□□□ -1.05
CCDC7-216ENST00000640058 SLC6A19Q695T7 634 aa8.51□□□□□ -1.05
CCDC7-216ENST00000640058 CCDC84Q86UT8 332 aaPredicted RBP8.51□□□□□ -1.05
CCDC7-216ENST00000640058 MFSD4AQ8N468 514 aa8.51□□□□□ -1.05
CCDC7-216ENST00000640058 GOLM1Q8NBJ4 401 aa8.51□□□□□ -1.05
CCDC7-216ENST00000640058 FBXO27Q8NI29 283 aa8.51□□□□□ -1.05
CCDC7-216ENST00000640058 ADAMTS6Q9UKP5 1117 aa8.51□□□□□ -1.05
CCDC7-216ENST00000640058 SNX11Q9Y5W9 270 aa8.51□□□□□ -1.05
CCDC7-216ENST00000640058 UPK3BL1B0FP48 263 aa8.5□□□□□ -1.05
CCDC7-216ENST00000640058 UPK3BL2E5RIL1 263 aa8.5□□□□□ -1.05
CCDC7-216ENST00000640058 TLR3O15455 904 aaKnown RBP8.5□□□□□ -1.05
CCDC7-216ENST00000640058 PWP1Q13610 501 aa8.5□□□□□ -1.05
CCDC7-216ENST00000640058 MRPL58Q14197 206 aaKnown RBP8.5□□□□□ -1.05
CCDC7-216ENST00000640058 HOMEZQ8IX15 550 aa8.5□□□□□ -1.05
CCDC7-216ENST00000640058 FAM13CQ8NE31 585 aa8.5□□□□□ -1.05
CCDC7-216ENST00000640058 PI4K2BQ8TCG2 481 aa8.5□□□□□ -1.05
CCDC7-216ENST00000640058 ASB11Q8WXH4 323 aa8.5□□□□□ -1.05
CCDC7-216ENST00000640058 HSPA12BQ96MM6 686 aa8.5□□□□□ -1.05
CCDC7-216ENST00000640058 RC3H2Q9HBD1 1191 aaKnown RBP8.5□□□□□ -1.05
CCDC7-216ENST00000640058 MBNL3Q9NUK0 354 aaKnown RBP8.5□□□□□ -1.05
CCDC7-216ENST00000640058 H3BS24 57 aa8.49□□□□□ -1.05
CCDC7-216ENST00000640058 RNASE1P07998 156 aaKnown RBP8.49□□□□□ -1.05
CCDC7-216ENST00000640058 CLCN7P51798 805 aa8.49□□□□□ -1.05
CCDC7-216ENST00000640058 MFAP1P55081 439 aaKnown RBP8.49□□□□□ -1.05
CCDC7-216ENST00000640058 MCATQ8IVS2 390 aaKnown RBP8.49□□□□□ -1.05
CCDC7-216ENST00000640058 ADAM30Q9UKF2 790 aa8.49□□□□□ -1.05
CCDC7-216ENST00000640058 RNF114Q9Y508 228 aa8.49□□□□□ -1.05
CCDC7-216ENST00000640058 PITPNM2Q9BZ72 1349 aa8.49□□□□□ -1.05
CCDC7-216ENST00000640058 ZNF865P0CJ78 1059 aaPredicted RBP8.48□□□□□ -1.05
CCDC7-216ENST00000640058 GARTP22102 1010 aa8.48□□□□□ -1.05
CCDC7-216ENST00000640058 ZNF746Q6NUN9 644 aaPredicted RBP8.48□□□□□ -1.05
CCDC7-216ENST00000640058 ERMP1Q7Z2K6 904 aa8.48□□□□□ -1.05
CCDC7-216ENST00000640058 KLHL3Q9UH77 587 aa8.48□□□□□ -1.05
CCDC7-216ENST00000640058 GGT7Q9UJ14 662 aa8.48□□□□□ -1.05
CCDC7-216ENST00000640058 POLR3KQ9Y2Y1 108 aaPredicted RBP8.48□□□□□ -1.05
CCDC7-216ENST00000640058 CAPN6Q9Y6Q1 641 aa8.48□□□□□ -1.05
CCDC7-216ENST00000640058 ZNF16P17020 682 aaPredicted RBP8.47□□□□□ -1.05
CCDC7-216ENST00000640058 ZP2Q05996 745 aa8.47□□□□□ -1.05
CCDC7-216ENST00000640058 LRRN4CLQ8ND94 238 aa8.47□□□□□ -1.05
CCDC7-216ENST00000640058 BCL11AQ9H165 835 aa8.47□□□□□ -1.05
CCDC7-216ENST00000640058 ATP13A1Q9HD20 1204 aa8.47□□□□□ -1.05
CCDC7-216ENST00000640058 REV1Q9UBZ9 1251 aa8.47□□□□□ -1.05
CCDC7-216ENST00000640058 CYP7A1P22680 504 aa8.46□□□□□ -1.06
CCDC7-216ENST00000640058 FBXL19Q6PCT2 694 aa8.46□□□□□ -1.06
CCDC7-216ENST00000640058 C22orf34Q6ZV56 151 aa8.46□□□□□ -1.06
CCDC7-216ENST00000640058 DNAJB8Q8NHS0 232 aa8.46□□□□□ -1.06
CCDC7-216ENST00000640058 SEMA3GQ9NS98 782 aa8.46□□□□□ -1.06
CCDC7-216ENST00000640058 PAPLNO95428 1278 aa8.45□□□□□ -1.06
CCDC7-216ENST00000640058 ITGB5P18084 799 aa8.45□□□□□ -1.06
CCDC7-216ENST00000640058 TNK2Q07912 1038 aa8.45□□□□□ -1.06
CCDC7-216ENST00000640058 MPP2Q14168 576 aa8.45□□□□□ -1.06
CCDC7-216ENST00000640058 FAM196AQ6ZSG2 479 aa8.45□□□□□ -1.06
CCDC7-216ENST00000640058 HS2ST1Q7LGA3 356 aa8.45□□□□□ -1.06
CCDC7-216ENST00000640058 REC114Q7Z4M0 266 aa8.45□□□□□ -1.06
CCDC7-216ENST00000640058 TMEM87AQ8NBN3 555 aa8.45□□□□□ -1.06
CCDC7-216ENST00000640058 KRTAP9-2Q9BYQ4 174 aa8.45□□□□□ -1.06
CCDC7-216ENST00000640058 CARS2Q9HA77 564 aaKnown RBP8.45□□□□□ -1.06
CCDC7-216ENST00000640058 CHURC1-FNTBB4DL54 471 aa8.44□□□□□ -1.06
CCDC7-216ENST00000640058 HTR3BO95264 441 aa8.44□□□□□ -1.06
CCDC7-216ENST00000640058 EIF4A3P38919 411 aaKnown RBP8.44□□□□□ -1.06
CCDC7-216ENST00000640058 ETV3P41162 512 aa8.44□□□□□ -1.06
CCDC7-216ENST00000640058 YARSP54577 528 aaKnown RBP8.44□□□□□ -1.06
CCDC7-216ENST00000640058 SLC23A3Q6PIS1 610 aa8.44□□□□□ -1.06
CCDC7-216ENST00000640058 PPP1R13LQ8WUF5 828 aa8.44□□□□□ -1.06
CCDC7-216ENST00000640058 CYB5D2Q8WUJ1 264 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms