RNA–Protein interactions for RNA: ENST00000639489.1

KCNMA1-262, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,302 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-262ENST00000639489 CLIC6Q96NY7 704 aa16.73■□□□□ 0.27
KCNMA1-262ENST00000639489 CCDC172P0C7W6 258 aa16.73■□□□□ 0.27
KCNMA1-262ENST00000639489 RAPGEF1Q13905 1077 aa16.73■□□□□ 0.27
KCNMA1-262ENST00000639489 ZNF827Q17R98 1081 aa16.73■□□□□ 0.27
KCNMA1-262ENST00000639489 CTR9Q6PD62 1173 aa16.73■□□□□ 0.27
KCNMA1-262ENST00000639489 KIAA1468Q9P260 1216 aa16.73■□□□□ 0.27
KCNMA1-262ENST00000639489 M0R2C6 588 aa16.73■□□□□ 0.27
KCNMA1-262ENST00000639489 GTF2F1P35269 517 aaKnown RBP eCLIP16.73■□□□□ 0.27
KCNMA1-262ENST00000639489 PRKG1Q13976 671 aa16.73■□□□□ 0.27
KCNMA1-262ENST00000639489 ARAP3Q8WWN8 1544 aa16.73■□□□□ 0.27
KCNMA1-262ENST00000639489 POTEB2H3BUK9 544 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 CFBP00751 764 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 NLRP12P59046 1061 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 TRERF1Q96PN7 1200 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 PCDHA7Q9UN72 937 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 SYNRGQ9UMZ2 1314 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 PPIP5K2O43314 1243 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 ADCY7P51828 1080 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 ERFEQ4G0M1 354 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 HERC4Q5GLZ8 1057 aaPredicted RBP16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 MAATS1Q7Z4T9 603 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 FAM212AQ96EL1 285 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 GLI2P10070 1586 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 SMCO2A6NFE2 343 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 APOA5Q6Q788 366 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 KRT25Q7Z3Z0 450 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 TTLL11Q8NHH1 800 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 TEKT1Q969V4 418 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 FTOQ9C0B1 505 aaKnown RBP eCLIP16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 ARHGEF10LQ9HCE6 1279 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 TBC1D7Q9P0N9 293 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 ALKQ9UM73 1620 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 DYNLL1P63167 89 aaKnown RBP16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 USP37Q86T82 979 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 GPKOWQ92917 476 aaPredicted RBP eCLIP16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 TAB2Q9NYJ8 693 aa16.72■□□□□ 0.27
KCNMA1-262ENST00000639489 CCDC122Q5T0U0 273 aa16.71■□□□□ 0.27
KCNMA1-262ENST00000639489 MAEAQ7L5Y9 396 aa16.71■□□□□ 0.27
KCNMA1-262ENST00000639489 CERS3Q8IU89 383 aa16.71■□□□□ 0.27
KCNMA1-262ENST00000639489 LRRC47Q8N1G4 583 aaKnown RBP16.71■□□□□ 0.27
KCNMA1-262ENST00000639489 BIN2Q9UBW5 565 aaPredicted RBP16.71■□□□□ 0.27
KCNMA1-262ENST00000639489 PAK1Q13153 545 aa16.71■□□□□ 0.27
KCNMA1-262ENST00000639489 CUL4AQ13619 759 aa16.71■□□□□ 0.27
KCNMA1-262ENST00000639489 IFI16Q16666 785 aaKnown RBP16.71■□□□□ 0.27
KCNMA1-262ENST00000639489 KIAA0753Q2KHM9 967 aa16.71■□□□□ 0.27
KCNMA1-262ENST00000639489 FERMT2Q96AC1 680 aa16.71■□□□□ 0.27
KCNMA1-262ENST00000639489 CPSF1Q10570 1443 aaKnown RBP16.71■□□□□ 0.27
KCNMA1-262ENST00000639489 KLRF2D3W0D1 207 aa16.71■□□□□ 0.26
KCNMA1-262ENST00000639489 ALDH1B1P30837 517 aa16.71■□□□□ 0.26
KCNMA1-262ENST00000639489 GBP2P32456 591 aaPredicted RBP16.71■□□□□ 0.26
KCNMA1-262ENST00000639489 NCAPH2Q6IBW4 605 aa16.71■□□□□ 0.26
KCNMA1-262ENST00000639489 XPO4Q9C0E2 1151 aaKnown RBP16.71■□□□□ 0.26
KCNMA1-262ENST00000639489 SH2D4AQ9H788 454 aa16.71■□□□□ 0.26
KCNMA1-262ENST00000639489 GPHNQ9NQX3 736 aaPredicted RBP16.71■□□□□ 0.26
KCNMA1-262ENST00000639489 HOMER2Q9NSB8 354 aa16.71■□□□□ 0.26
KCNMA1-262ENST00000639489 CLIC4Q9Y696 253 aa16.71■□□□□ 0.26
KCNMA1-262ENST00000639489 ZMYM6O95789 1325 aa16.71■□□□□ 0.26
KCNMA1-262ENST00000639489 TRIM37O94972 964 aa16.7■□□□□ 0.26
KCNMA1-262ENST00000639489 RHOXF2BP0C7M4 288 aa16.7■□□□□ 0.26
KCNMA1-262ENST00000639489 RHOXF2Q9BQY4 288 aa16.7■□□□□ 0.26
KCNMA1-262ENST00000639489 SRP68Q9UHB9 627 aaKnown RBP16.7■□□□□ 0.26
KCNMA1-262ENST00000639489 CDC42BPBQ9Y5S2 1711 aa16.7■□□□□ 0.26
KCNMA1-262ENST00000639489 UNC13BO14795 1591 aa16.7■□□□□ 0.26
KCNMA1-262ENST00000639489 H7C1W4 665 aa16.7■□□□□ 0.26
KCNMA1-262ENST00000639489 BTDP43251 543 aa16.7■□□□□ 0.26
KCNMA1-262ENST00000639489 CKAP4Q07065 602 aaKnown RBP16.7■□□□□ 0.26
KCNMA1-262ENST00000639489 INF2Q27J81 1249 aa16.7■□□□□ 0.26
KCNMA1-262ENST00000639489 NSMFQ6X4W1 530 aa16.7■□□□□ 0.26
KCNMA1-262ENST00000639489 PPP1R9BQ96SB3 815 aa16.7■□□□□ 0.26
KCNMA1-262ENST00000639489 KRT9P35527 623 aa16.7■□□□□ 0.26
KCNMA1-262ENST00000639489 LMAN1P49257 510 aa16.7■□□□□ 0.26
KCNMA1-262ENST00000639489 SUSD4Q5VX71 490 aa16.7■□□□□ 0.26
KCNMA1-262ENST00000639489 NSUN7Q8NE18 718 aaKnown RBP16.7■□□□□ 0.26
KCNMA1-262ENST00000639489 EEF2KMTQ96G04 330 aa16.7■□□□□ 0.26
KCNMA1-262ENST00000639489 PNPLA6Q8IY17 1366 aa16.7■□□□□ 0.26
KCNMA1-262ENST00000639489 A0A087WWV3 80 aa16.69■□□□□ 0.26
KCNMA1-262ENST00000639489 DDX39AO00148 427 aaKnown RBP16.69■□□□□ 0.26
KCNMA1-262ENST00000639489 ADD2P35612 726 aa16.69■□□□□ 0.26
KCNMA1-262ENST00000639489 DLGAP5Q15398 846 aa16.69■□□□□ 0.26
KCNMA1-262ENST00000639489 CALCRLQ16602 461 aa16.69■□□□□ 0.26
KCNMA1-262ENST00000639489 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.69■□□□□ 0.26
KCNMA1-262ENST00000639489 FRMPD2Q68DX3 1309 aaPredicted RBP16.69■□□□□ 0.26
KCNMA1-262ENST00000639489 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.69■□□□□ 0.26
KCNMA1-262ENST00000639489 NDUFA8P51970 172 aa16.69■□□□□ 0.26
KCNMA1-262ENST00000639489 CNNM4Q6P4Q7 775 aa16.69■□□□□ 0.26
KCNMA1-262ENST00000639489 HOOK3Q86VS8 718 aa16.69■□□□□ 0.26
KCNMA1-262ENST00000639489 MPHOSPH6Q99547 160 aaKnown RBP16.69■□□□□ 0.26
KCNMA1-262ENST00000639489 FAM107BQ9H098 131 aa16.69■□□□□ 0.26
KCNMA1-262ENST00000639489 NECTIN1Q15223 517 aa16.69■□□□□ 0.26
KCNMA1-262ENST00000639489 TAOK3Q9H2K8 898 aa16.69■□□□□ 0.26
KCNMA1-262ENST00000639489 QTRT2Q9H974 415 aaKnown RBP16.69■□□□□ 0.26
KCNMA1-262ENST00000639489 RPL13P26373 211 aaKnown RBP16.69■□□□□ 0.26
KCNMA1-262ENST00000639489 GJC1P36383 396 aa16.69■□□□□ 0.26
KCNMA1-262ENST00000639489 NELFCDQ8IXH7 590 aa16.69■□□□□ 0.26
KCNMA1-262ENST00000639489 ADGRL3Q9HAR2 1447 aa16.68■□□□□ 0.26
KCNMA1-262ENST00000639489 SHTN1A0MZ66 631 aa16.68■□□□□ 0.26
KCNMA1-262ENST00000639489 HAUS3Q68CZ6 603 aa16.68■□□□□ 0.26
KCNMA1-262ENST00000639489 CABP7Q86V35 215 aa16.68■□□□□ 0.26
KCNMA1-262ENST00000639489 SYNCQ9H7C4 482 aa16.68■□□□□ 0.26
KCNMA1-262ENST00000639489 HARSP12081 509 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms