RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 SRP68Q9UHB9 627 aaKnown RBP12.19□□□□□ -0.46
NECAP1-216ENST00000639167 SERTAD1Q9UHV2 236 aa12.19□□□□□ -0.46
NECAP1-216ENST00000639167 ANAPC4Q9UJX5 808 aa12.19□□□□□ -0.46
NECAP1-216ENST00000639167 FBXO2Q9UK22 296 aaPredicted RBP12.19□□□□□ -0.46
NECAP1-216ENST00000639167 IKBKBO14920 756 aa12.18□□□□□ -0.46
NECAP1-216ENST00000639167 PLEKHA8P1O95397 391 aa12.18□□□□□ -0.46
NECAP1-216ENST00000639167 PRR29P0C7W0 189 aa12.18□□□□□ -0.46
NECAP1-216ENST00000639167 PDE4BQ07343 736 aa12.18□□□□□ -0.46
NECAP1-216ENST00000639167 RILPL1Q5EBL4 403 aa12.18□□□□□ -0.46
NECAP1-216ENST00000639167 OLFM4Q6UX06 510 aa12.18□□□□□ -0.46
NECAP1-216ENST00000639167 BARGINQ6ZT62 677 aa12.18□□□□□ -0.46
NECAP1-216ENST00000639167 GRAMD1CQ8IYS0 662 aa12.18□□□□□ -0.46
NECAP1-216ENST00000639167 PDILTQ8N807 584 aa12.18□□□□□ -0.46
NECAP1-216ENST00000639167 MTA3Q9BTC8 594 aa12.18□□□□□ -0.46
NECAP1-216ENST00000639167 IMPACTQ9P2X3 320 aa12.18□□□□□ -0.46
NECAP1-216ENST00000639167 JAG2Q9Y219 1238 aa12.18□□□□□ -0.46
NECAP1-216ENST00000639167 CACNA1SQ13698 1873 aa12.18□□□□□ -0.46
NECAP1-216ENST00000639167 BAZ2AQ9UIF9 1905 aaKnown RBP12.18□□□□□ -0.46
NECAP1-216ENST00000639167 POLR2DO15514 142 aaKnown RBP12.18□□□□□ -0.46
NECAP1-216ENST00000639167 CTIFO43310 598 aaKnown RBP12.18□□□□□ -0.46
NECAP1-216ENST00000639167 BMP6P22004 513 aa12.18□□□□□ -0.46
NECAP1-216ENST00000639167 PTPREP23469 700 aa12.18□□□□□ -0.46
NECAP1-216ENST00000639167 AKAP17AQ02040 695 aaKnown RBP12.18□□□□□ -0.46
NECAP1-216ENST00000639167 MYL5Q02045 173 aa12.18□□□□□ -0.46
NECAP1-216ENST00000639167 PTPN14Q15678 1187 aa12.18□□□□□ -0.46
NECAP1-216ENST00000639167 HSP90AA4PQ58FG1 418 aa12.18□□□□□ -0.46
NECAP1-216ENST00000639167 IFIT1BQ5T764 474 aaKnown RBP12.18□□□□□ -0.46
NECAP1-216ENST00000639167 USP49Q70CQ1 688 aa12.18□□□□□ -0.46
NECAP1-216ENST00000639167 CCAR2Q8N163 923 aaKnown RBP12.18□□□□□ -0.46
NECAP1-216ENST00000639167 MYH2Q9UKX2 1941 aa12.17□□□□□ -0.46
NECAP1-216ENST00000639167 USP17L12C9JPN9 530 aa12.17□□□□□ -0.46
NECAP1-216ENST00000639167 USP17L21D6R901 530 aa12.17□□□□□ -0.46
NECAP1-216ENST00000639167 SERPINC1P01008 464 aa12.17□□□□□ -0.46
NECAP1-216ENST00000639167 PIP4K2BP78356 416 aa12.17□□□□□ -0.46
NECAP1-216ENST00000639167 NAA30Q147X3 362 aaPredicted RBP12.17□□□□□ -0.46
NECAP1-216ENST00000639167 PKN1Q16512 942 aa12.17□□□□□ -0.46
NECAP1-216ENST00000639167 ZNF827Q17R98 1081 aa12.17□□□□□ -0.46
NECAP1-216ENST00000639167 EARS2Q5JPH6 523 aaKnown RBP12.17□□□□□ -0.46
NECAP1-216ENST00000639167 CTR9Q6PD62 1173 aa12.17□□□□□ -0.46
NECAP1-216ENST00000639167 CCDC112Q8NEF3 446 aa12.17□□□□□ -0.46
NECAP1-216ENST00000639167 RNF26Q9BY78 433 aaPredicted RBP12.17□□□□□ -0.46
NECAP1-216ENST00000639167 FANCLQ9NW38 375 aa12.17□□□□□ -0.46
NECAP1-216ENST00000639167 AATFQ9NY61 560 aaKnown RBP eCLIP12.17□□□□□ -0.46
NECAP1-216ENST00000639167 V9GY48 417 aaPredicted RBP12.17□□□□□ -0.46
NECAP1-216ENST00000639167 NMT2O60551 498 aa12.16□□□□□ -0.46
NECAP1-216ENST00000639167 SFPQP23246 707 aaKnown RBP eCLIP12.16□□□□□ -0.46
NECAP1-216ENST00000639167 RCAN1P53805 252 aa12.16□□□□□ -0.46
NECAP1-216ENST00000639167 UBASH3AP57075 661 aa12.16□□□□□ -0.46
NECAP1-216ENST00000639167 MDM2Q00987 491 aaPredicted RBP12.16□□□□□ -0.46
NECAP1-216ENST00000639167 MECOMQ03112 1051 aa12.16□□□□□ -0.46
NECAP1-216ENST00000639167 SLC4A8Q2Y0W8 1093 aa12.16□□□□□ -0.46
NECAP1-216ENST00000639167 NYAP1Q6ZVC0 841 aa12.16□□□□□ -0.46
NECAP1-216ENST00000639167 CCDC150Q8NCX0 1101 aa12.16□□□□□ -0.46
NECAP1-216ENST00000639167 NSUN4Q96CB9 384 aaKnown RBP12.16□□□□□ -0.46
NECAP1-216ENST00000639167 BRIP1Q9BX63 1249 aa12.16□□□□□ -0.46
NECAP1-216ENST00000639167 PAXBP1Q9Y5B6 917 aa12.16□□□□□ -0.46
NECAP1-216ENST00000639167 COL5A3P25940 1745 aaPredicted RBP12.16□□□□□ -0.46
NECAP1-216ENST00000639167 PRDX5P30044 214 aa12.16□□□□□ -0.46
NECAP1-216ENST00000639167 RPS8P62241 208 aaKnown RBP12.16□□□□□ -0.46
NECAP1-216ENST00000639167 GOLGA8FQ08AF8 430 aa12.16□□□□□ -0.46
NECAP1-216ENST00000639167 GOLGA8DPQ0D2H9 430 aa12.16□□□□□ -0.46
NECAP1-216ENST00000639167 POSTNQ15063 836 aa12.16□□□□□ -0.46
NECAP1-216ENST00000639167 CFAP100Q494V2 611 aa12.16□□□□□ -0.46
NECAP1-216ENST00000639167 FBXO33Q7Z6M2 555 aa12.16□□□□□ -0.46
NECAP1-216ENST00000639167 CATIPQ7Z7H3 387 aa12.16□□□□□ -0.46
NECAP1-216ENST00000639167 CSRNP2Q9H175 543 aa12.16□□□□□ -0.46
NECAP1-216ENST00000639167 DUOX1Q9NRD9 1551 aa12.16□□□□□ -0.46
NECAP1-216ENST00000639167 MAN1B1Q9UKM7 699 aa12.16□□□□□ -0.46
NECAP1-216ENST00000639167 A0A1B0GUL6 1792 aa12.16□□□□□ -0.46
NECAP1-216ENST00000639167 TMEM232C9JQI7 657 aa12.15□□□□□ -0.46
NECAP1-216ENST00000639167 CYP2D6P10635 497 aa12.15□□□□□ -0.46
NECAP1-216ENST00000639167 NCBP1Q09161 790 aaKnown RBP12.15□□□□□ -0.46
NECAP1-216ENST00000639167 FUT2Q10981 343 aa12.15□□□□□ -0.46
NECAP1-216ENST00000639167 NOM1Q5C9Z4 860 aaKnown RBP12.15□□□□□ -0.46
NECAP1-216ENST00000639167 FAM47AQ5JRC9 791 aa12.15□□□□□ -0.46
NECAP1-216ENST00000639167 E4F1Q66K89 784 aaPredicted RBP12.15□□□□□ -0.46
NECAP1-216ENST00000639167 SLC51AQ86UW1 340 aa12.15□□□□□ -0.46
NECAP1-216ENST00000639167 NBPF5PQ86XG9 351 aaPredicted RBP12.15□□□□□ -0.46
NECAP1-216ENST00000639167 IQCA1Q86XH1 822 aa12.15□□□□□ -0.46
NECAP1-216ENST00000639167 SRPRBQ9Y5M8 271 aaKnown RBP12.15□□□□□ -0.46
NECAP1-216ENST00000639167 WNT7AO00755 349 aa12.15□□□□□ -0.47
NECAP1-216ENST00000639167 PPP4R3BQ5MIZ7 849 aa12.15□□□□□ -0.47
NECAP1-216ENST00000639167 PDCL2Q8N4E4 241 aa12.15□□□□□ -0.47
NECAP1-216ENST00000639167 ANKRD7Q92527 254 aa12.15□□□□□ -0.47
NECAP1-216ENST00000639167 NLRP3Q96P20 1036 aa12.15□□□□□ -0.47
NECAP1-216ENST00000639167 SETDB2Q96T68 719 aa12.15□□□□□ -0.47
NECAP1-216ENST00000639167 BCCIPQ9P287 314 aaKnown RBP eCLIP12.15□□□□□ -0.47
NECAP1-216ENST00000639167 MYH6P13533 1939 aa12.14□□□□□ -0.47
NECAP1-216ENST00000639167 PRPF3O43395 683 aaKnown RBP12.14□□□□□ -0.47
NECAP1-216ENST00000639167 XBP1P17861 261 aa12.14□□□□□ -0.47
NECAP1-216ENST00000639167 HIBADHP31937 336 aaKnown RBP12.14□□□□□ -0.47
NECAP1-216ENST00000639167 KRT2P35908 639 aa12.14□□□□□ -0.47
NECAP1-216ENST00000639167 TROAPQ12815 778 aa12.14□□□□□ -0.47
NECAP1-216ENST00000639167 SLC10A5Q5PT55 438 aa12.14□□□□□ -0.47
NECAP1-216ENST00000639167 TXNRD3Q86VQ6 643 aa12.14□□□□□ -0.47
NECAP1-216ENST00000639167 TRMT44Q8IYL2 757 aaKnown RBP12.14□□□□□ -0.47
NECAP1-216ENST00000639167 SMARCE1Q969G3 411 aa12.14□□□□□ -0.47
NECAP1-216ENST00000639167 PHF20Q9BVI0 1012 aa12.14□□□□□ -0.47
NECAP1-216ENST00000639167 CCDC94Q9BW85 323 aaPredicted RBP12.14□□□□□ -0.47
NECAP1-216ENST00000639167 HOOK1Q9UJC3 728 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms