RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 CCDC102BQ68D86 513 aa6.81□□□□□ -1.32
PDE4D-229ENST00000638939 SH3BP5LQ7L8J4 393 aa6.81□□□□□ -1.32
PDE4D-229ENST00000638939 PARP9Q8IXQ6 854 aa6.81□□□□□ -1.32
PDE4D-229ENST00000638939 TRMT2AQ8IZ69 625 aaKnown RBP6.81□□□□□ -1.32
PDE4D-229ENST00000638939 PROCA1Q8NCQ7 364 aaPredicted RBP6.81□□□□□ -1.32
PDE4D-229ENST00000638939 PXYLP1Q8TE99 480 aa6.81□□□□□ -1.32
PDE4D-229ENST00000638939 TBC1D2Q9BYX2 928 aa6.81□□□□□ -1.32
PDE4D-229ENST00000638939 USP40Q9NVE5 1235 aa6.81□□□□□ -1.32
PDE4D-229ENST00000638939 AGTPBP1Q9UPW5 1226 aa6.81□□□□□ -1.32
PDE4D-229ENST00000638939 AFG3L2Q9Y4W6 797 aa6.81□□□□□ -1.32
PDE4D-229ENST00000638939 ZNFX1Q9P2E3 1918 aaKnown RBP6.81□□□□□ -1.32
PDE4D-229ENST00000638939 VCANP13611 3396 aa6.81□□□□□ -1.32
PDE4D-229ENST00000638939 BAZ2AQ9UIF9 1905 aaKnown RBP6.8□□□□□ -1.32
PDE4D-229ENST00000638939 CTNND1O60716 968 aaKnown RBP6.8□□□□□ -1.32
PDE4D-229ENST00000638939 PLCG2P16885 1265 aa6.8□□□□□ -1.32
PDE4D-229ENST00000638939 BTDP43251 543 aa6.8□□□□□ -1.32
PDE4D-229ENST00000638939 RHBDL3P58872 404 aa6.8□□□□□ -1.32
PDE4D-229ENST00000638939 MVPQ14764 893 aaKnown RBP6.8□□□□□ -1.32
PDE4D-229ENST00000638939 SPTY2D1Q68D10 685 aaPredicted RBP6.8□□□□□ -1.32
PDE4D-229ENST00000638939 ZFPM1Q8IX07 1006 aa6.8□□□□□ -1.32
PDE4D-229ENST00000638939 SMCR8Q8TEV9 937 aaPredicted RBP6.8□□□□□ -1.32
PDE4D-229ENST00000638939 U2AF1L4Q8WU68 220 aaKnown RBP6.8□□□□□ -1.32
PDE4D-229ENST00000638939 API5Q9BZZ5 524 aaKnown RBP6.8□□□□□ -1.32
PDE4D-229ENST00000638939 RNF208Q9H0X6 261 aa6.8□□□□□ -1.32
PDE4D-229ENST00000638939 DDX4Q9NQI0 724 aaKnown RBP6.8□□□□□ -1.32
PDE4D-229ENST00000638939 PAK6Q9NQU5 681 aaPredicted RBP6.8□□□□□ -1.32
PDE4D-229ENST00000638939 BMP2KQ9NSY1 1161 aaPredicted RBP6.8□□□□□ -1.32
PDE4D-229ENST00000638939 PNMA3Q9UL41 463 aa6.8□□□□□ -1.32
PDE4D-229ENST00000638939 LRRFIP2Q9Y608 721 aaKnown RBP6.8□□□□□ -1.32
PDE4D-229ENST00000638939 ZHX2Q9Y6X8 837 aa6.8□□□□□ -1.32
PDE4D-229ENST00000638939 GPR75-ASB3A0A0A6YYF3 556 aa6.79□□□□□ -1.32
PDE4D-229ENST00000638939 A0A1B0GUL7 405 aa6.79□□□□□ -1.32
PDE4D-229ENST00000638939 DDTLA6NHG4 134 aaPredicted RBP6.79□□□□□ -1.32
PDE4D-229ENST00000638939 A6NJR5 290 aa6.79□□□□□ -1.32
PDE4D-229ENST00000638939 TNPO2O14787 897 aaKnown RBP6.79□□□□□ -1.32
PDE4D-229ENST00000638939 ADCY3O60266 1144 aa6.79□□□□□ -1.32
PDE4D-229ENST00000638939 SGPL1O95470 568 aa6.79□□□□□ -1.32
PDE4D-229ENST00000638939 INHAP05111 366 aa6.79□□□□□ -1.32
PDE4D-229ENST00000638939 ADORA1P30542 326 aa6.79□□□□□ -1.32
PDE4D-229ENST00000638939 FLT3LGP49771 235 aa6.79□□□□□ -1.32
PDE4D-229ENST00000638939 GADL1Q6ZQY3 521 aa6.79□□□□□ -1.32
PDE4D-229ENST00000638939 ZSCAN29Q8IWY8 852 aaPredicted RBP6.79□□□□□ -1.32
PDE4D-229ENST00000638939 ZNF384Q8TF68 577 aa6.79□□□□□ -1.32
PDE4D-229ENST00000638939 MEIS3Q99687 375 aa6.79□□□□□ -1.32
PDE4D-229ENST00000638939 TMEM121BQ9BXQ6 578 aaPredicted RBP6.79□□□□□ -1.32
PDE4D-229ENST00000638939 OSBPL5Q9H0X9 879 aaPredicted RBP6.79□□□□□ -1.32
PDE4D-229ENST00000638939 UNC93B1Q9H1C4 597 aa6.79□□□□□ -1.32
PDE4D-229ENST00000638939 RBM27Q9P2N5 1060 aaKnown RBP6.79□□□□□ -1.32
PDE4D-229ENST00000638939 BIN2Q9UBW5 565 aaPredicted RBP6.79□□□□□ -1.32
PDE4D-229ENST00000638939 ABCF2Q9UG63 623 aa6.79□□□□□ -1.32
PDE4D-229ENST00000638939 GABRQQ9UN88 632 aa6.79□□□□□ -1.32
PDE4D-229ENST00000638939 PA2G4Q9UQ80 394 aaKnown RBP6.79□□□□□ -1.32
PDE4D-229ENST00000638939 AKAP2Q9Y2D5 859 aa6.79□□□□□ -1.32
PDE4D-229ENST00000638939 NR2E3Q9Y5X4 410 aa6.79□□□□□ -1.32
PDE4D-229ENST00000638939 C2orf72A6NCS6 295 aa6.78□□□□□ -1.32
PDE4D-229ENST00000638939 TRIM75PA6NK02 468 aa6.78□□□□□ -1.32
PDE4D-229ENST00000638939 APBB1O00213 710 aa6.78□□□□□ -1.32
PDE4D-229ENST00000638939 ZBTB7BO15156 539 aaPredicted RBP6.78□□□□□ -1.32
PDE4D-229ENST00000638939 RAD21O60216 631 aa6.78□□□□□ -1.32
PDE4D-229ENST00000638939 GNAI3P08754 354 aa6.78□□□□□ -1.32
PDE4D-229ENST00000638939 PDIA4P13667 645 aaKnown RBP6.78□□□□□ -1.32
PDE4D-229ENST00000638939 ELNP15502 786 aa6.78□□□□□ -1.32
PDE4D-229ENST00000638939 ARID4AP29374 1257 aaPredicted RBP6.78□□□□□ -1.32
PDE4D-229ENST00000638939 GCLCP48506 637 aaPredicted RBP6.78□□□□□ -1.32
PDE4D-229ENST00000638939 GSTO1P78417 241 aa6.78□□□□□ -1.32
PDE4D-229ENST00000638939 MECOMQ03112 1051 aa6.78□□□□□ -1.32
PDE4D-229ENST00000638939 PABPC4Q13310 644 aaKnown RBP eCLIP6.78□□□□□ -1.32
PDE4D-229ENST00000638939 PICALMQ13492 652 aa6.78□□□□□ -1.32
PDE4D-229ENST00000638939 TREML2Q5T2D2 321 aa6.78□□□□□ -1.32
PDE4D-229ENST00000638939 ANKLE1Q8NAG6 615 aa6.78□□□□□ -1.32
PDE4D-229ENST00000638939 ARHGAP45Q92619 1136 aa6.78□□□□□ -1.32
PDE4D-229ENST00000638939 DPF3Q92784 378 aa6.78□□□□□ -1.32
PDE4D-229ENST00000638939 COA7Q96BR5 231 aa6.78□□□□□ -1.32
PDE4D-229ENST00000638939 NSUN4Q96CB9 384 aaKnown RBP6.78□□□□□ -1.32
PDE4D-229ENST00000638939 XAGE2Q96GT9 111 aa6.78□□□□□ -1.32
PDE4D-229ENST00000638939 HERC5Q9UII4 1024 aaKnown RBP6.78□□□□□ -1.32
PDE4D-229ENST00000638939 SRGAP3O43295 1099 aa6.77□□□□□ -1.33
PDE4D-229ENST00000638939 IGSF3O75054 1194 aa6.77□□□□□ -1.33
PDE4D-229ENST00000638939 HMGCRP04035 888 aa6.77□□□□□ -1.33
PDE4D-229ENST00000638939 CAP2P40123 477 aa6.77□□□□□ -1.33
PDE4D-229ENST00000638939 TFCP2Q12800 502 aa6.77□□□□□ -1.33
PDE4D-229ENST00000638939 SH3D19Q5HYK7 790 aa6.77□□□□□ -1.33
PDE4D-229ENST00000638939 ANKRD13CQ8N6S4 541 aa6.77□□□□□ -1.33
PDE4D-229ENST00000638939 SPATA5Q8NB90 893 aa6.77□□□□□ -1.33
PDE4D-229ENST00000638939 ZNF280CQ8ND82 737 aa6.77□□□□□ -1.33
PDE4D-229ENST00000638939 CDCA7LQ96GN5 454 aa6.77□□□□□ -1.33
PDE4D-229ENST00000638939 EPAS1Q99814 870 aa6.77□□□□□ -1.33
PDE4D-229ENST00000638939 ARID3AQ99856 593 aa6.77□□□□□ -1.33
PDE4D-229ENST00000638939 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.77□□□□□ -1.33
PDE4D-229ENST00000638939 HMG20BQ9P0W2 317 aa6.77□□□□□ -1.33
PDE4D-229ENST00000638939 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.77□□□□□ -1.33
PDE4D-229ENST00000638939 MORF4L1Q9UBU8 362 aa6.77□□□□□ -1.33
PDE4D-229ENST00000638939 NOB1Q9ULX3 412 aaKnown RBP6.77□□□□□ -1.33
PDE4D-229ENST00000638939 GREB1LQ9C091 1923 aaPredicted RBP6.77□□□□□ -1.33
PDE4D-229ENST00000638939 MUC3AQ02505 3323 aa6.76□□□□□ -1.33
PDE4D-229ENST00000638939 MYH4Q9Y623 1939 aa6.76□□□□□ -1.33
PDE4D-229ENST00000638939 FAM196BA6NMK8 535 aa6.76□□□□□ -1.33
PDE4D-229ENST00000638939 USP17L5A8MUK1 530 aa6.76□□□□□ -1.33
PDE4D-229ENST00000638939 EVI5O60447 810 aa6.76□□□□□ -1.33
PDE4D-229ENST00000638939 LDHCP07864 332 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms