RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 YIPF3Q9GZM5 350 aa8.08□□□□□ -1.12
NECAP1-213ENST00000638883 CHCHD3Q9NX63 227 aaKnown RBP8.08□□□□□ -1.12
NECAP1-213ENST00000638883 BIN2Q9UBW5 565 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-213ENST00000638883 SIPA1L1O43166 1804 aa8.07□□□□□ -1.12
NECAP1-213ENST00000638883 ABCC4O15439 1325 aa8.07□□□□□ -1.12
NECAP1-213ENST00000638883 BIN1O00499 593 aa8.07□□□□□ -1.12
NECAP1-213ENST00000638883 CBFA2T2O43439 604 aa8.07□□□□□ -1.12
NECAP1-213ENST00000638883 ZKSCAN1P17029 563 aaPredicted RBP8.07□□□□□ -1.12
NECAP1-213ENST00000638883 ME1P48163 572 aa8.07□□□□□ -1.12
NECAP1-213ENST00000638883 CCDC121Q6ZUS5 278 aa8.07□□□□□ -1.12
NECAP1-213ENST00000638883 NECAB1Q8N987 351 aa8.07□□□□□ -1.12
NECAP1-213ENST00000638883 KLHL23Q8NBE8 558 aa8.07□□□□□ -1.12
NECAP1-213ENST00000638883 DDX54Q8TDD1 881 aaKnown RBP8.07□□□□□ -1.12
NECAP1-213ENST00000638883 PARD3BQ8TEW8 1205 aa8.07□□□□□ -1.12
NECAP1-213ENST00000638883 ATRIPQ8WXE1 791 aa8.07□□□□□ -1.12
NECAP1-213ENST00000638883 ZSCAN31Q96LW9 406 aaPredicted RBP8.07□□□□□ -1.12
NECAP1-213ENST00000638883 SUGCTQ9HAC7 445 aa8.07□□□□□ -1.12
NECAP1-213ENST00000638883 CFAP45Q9UL16 551 aa8.07□□□□□ -1.12
NECAP1-213ENST00000638883 BRCA2P51587 3418 aa8.07□□□□□ -1.12
NECAP1-213ENST00000638883 BUB1BO60566 1050 aaPredicted RBP8.07□□□□□ -1.12
NECAP1-213ENST00000638883 SNX1Q13596 522 aa8.07□□□□□ -1.12
NECAP1-213ENST00000638883 DBN1Q16643 649 aa8.07□□□□□ -1.12
NECAP1-213ENST00000638883 CCDC40Q4G0X9 1142 aa8.07□□□□□ -1.12
NECAP1-213ENST00000638883 SARM1Q6SZW1 724 aa8.07□□□□□ -1.12
NECAP1-213ENST00000638883 C11orf57Q6ZUT1 292 aaPredicted RBP8.07□□□□□ -1.12
NECAP1-213ENST00000638883 A0A087WWV3 80 aa8.07□□□□□ -1.12
NECAP1-213ENST00000638883 ENOX2Q16206 610 aaKnown RBP8.07□□□□□ -1.12
NECAP1-213ENST00000638883 DHX58Q96C10 678 aa8.07□□□□□ -1.12
NECAP1-213ENST00000638883 MTMR6Q9Y217 621 aa8.07□□□□□ -1.12
NECAP1-213ENST00000638883 CYP46A1Q9Y6A2 500 aa8.07□□□□□ -1.12
NECAP1-213ENST00000638883 ERBB3P21860 1342 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 GREB1LQ9C091 1923 aaPredicted RBP8.06□□□□□ -1.12
NECAP1-213ENST00000638883 CPDO75976 1380 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 FOXO3O43524 673 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 TUBBP07437 444 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 POTEJP0CG39 1038 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 SLC8A1P32418 973 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 STIM1Q13586 685 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 CAPRIN2Q6IMN6 1127 aaKnown RBP8.06□□□□□ -1.12
NECAP1-213ENST00000638883 TRIM74Q86UV6 250 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 TRIM73Q86UV7 250 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 TBC1D31Q96DN5 1066 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 NGLY1Q96IV0 654 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 JAKMIP1Q96N16 626 aaKnown RBP8.06□□□□□ -1.12
NECAP1-213ENST00000638883 LZTFL1Q9NQ48 299 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 PPP1R1BQ9UD71 204 aaPredicted RBP8.06□□□□□ -1.12
NECAP1-213ENST00000638883 MCM8Q9UJA3 840 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 MAST2Q6P0Q8 1798 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 MAP4K4O95819 1239 aaPredicted RBP8.06□□□□□ -1.12
NECAP1-213ENST00000638883 MCM3P25205 808 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 SSTR3P32745 418 aaPredicted RBP8.06□□□□□ -1.12
NECAP1-213ENST00000638883 UBASH3AP57075 661 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 STK3Q13188 491 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 HSP90AB2PQ58FF8 381 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 CCAR1Q8IX12 1150 aaKnown RBP8.06□□□□□ -1.12
NECAP1-213ENST00000638883 RPAP2Q8IXW5 612 aaPredicted RBP8.06□□□□□ -1.12
NECAP1-213ENST00000638883 ZNF483Q8TF39 744 aaPredicted RBP8.06□□□□□ -1.12
NECAP1-213ENST00000638883 BAIAP2L1Q9UHR4 511 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 HOOK1Q9UJC3 728 aaKnown RBP8.06□□□□□ -1.12
NECAP1-213ENST00000638883 RIPOR2Q9Y4F9 1068 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 SPDYE5A6NIY4 337 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 TUBB4BP68371 445 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 PSME1Q06323 249 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 TBC1D8BQ0IIM8 1120 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 EIF4A2Q14240 407 aaKnown RBP8.06□□□□□ -1.12
NECAP1-213ENST00000638883 KCNV1Q6PIU1 500 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 SRGAP1Q7Z6B7 1085 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 IGSF22Q8N9C0 903 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 CAGE1Q8TC20 777 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 NLRP7Q8WX94 980 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 PARP3Q9Y6F1 533 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 MEGF6O75095 1541 aa8.06□□□□□ -1.12
NECAP1-213ENST00000638883 NEFHP12036 1026 aa8.05□□□□□ -1.12
NECAP1-213ENST00000638883 PDE1AP54750 535 aa8.05□□□□□ -1.12
NECAP1-213ENST00000638883 CCT2P78371 535 aaKnown RBP8.05□□□□□ -1.12
NECAP1-213ENST00000638883 C11orf91Q3C1V1 193 aa8.05□□□□□ -1.12
NECAP1-213ENST00000638883 PREPLQ4J6C6 727 aaPredicted RBP8.05□□□□□ -1.12
NECAP1-213ENST00000638883 ZC3H12AQ5D1E8 599 aaKnown RBP8.05□□□□□ -1.12
NECAP1-213ENST00000638883 SULT6B1Q6IMI4 303 aa8.05□□□□□ -1.12
NECAP1-213ENST00000638883 UBXN6Q9BZV1 441 aa8.05□□□□□ -1.12
NECAP1-213ENST00000638883 SH2B1Q9NRF2 756 aaPredicted RBP8.05□□□□□ -1.12
NECAP1-213ENST00000638883 ANAPC4Q9UJX5 808 aa8.05□□□□□ -1.12
NECAP1-213ENST00000638883 PARP14Q460N5 1801 aa8.05□□□□□ -1.12
NECAP1-213ENST00000638883 CPA1P15085 419 aa8.05□□□□□ -1.12
NECAP1-213ENST00000638883 GNAI1P63096 354 aa8.05□□□□□ -1.12
NECAP1-213ENST00000638883 TMC2Q8TDI7 906 aa8.05□□□□□ -1.12
NECAP1-213ENST00000638883 LEO1Q8WVC0 666 aaPredicted RBP8.05□□□□□ -1.12
NECAP1-213ENST00000638883 PPP2R2CQ9Y2T4 447 aa8.05□□□□□ -1.12
NECAP1-213ENST00000638883 BCL9O00512 1426 aa8.05□□□□□ -1.12
NECAP1-213ENST00000638883 KDM6AO15550 1401 aaPredicted RBP8.05□□□□□ -1.12
NECAP1-213ENST00000638883 CENPFP49454 3210 aa8.05□□□□□ -1.12
NECAP1-213ENST00000638883 CHD4Q14839 1912 aa8.05□□□□□ -1.12
NECAP1-213ENST00000638883 GNAI3P08754 354 aa8.05□□□□□ -1.12
NECAP1-213ENST00000638883 A1CFQ9NQ94 594 aaKnown RBP8.05□□□□□ -1.12
NECAP1-213ENST00000638883 LRRC23Q53EV4 343 aaPredicted RBP8.04□□□□□ -1.12
NECAP1-213ENST00000638883 BEND6Q5SZJ8 279 aaPredicted RBP8.04□□□□□ -1.12
NECAP1-213ENST00000638883 MSL1Q68DK7 614 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 SMARCC2Q8TAQ2 1214 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 RTL1A6NKG5 1358 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 RPAP1Q9BWH6 1393 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms