RNA–Protein interactions for RNA: ENST00000638799.1

RTTN-213, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,943 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-213ENST00000638799 TMC4Q7Z404 712 aa8.55□□□□□ -1.04
RTTN-213ENST00000638799 NBPF11Q86T75 865 aa8.55□□□□□ -1.04
RTTN-213ENST00000638799 C2CD5Q86YS7 1000 aa8.55□□□□□ -1.04
RTTN-213ENST00000638799 CERS5Q8N5B7 392 aa8.55□□□□□ -1.04
RTTN-213ENST00000638799 KCNQ5Q9NR82 932 aa8.55□□□□□ -1.04
RTTN-213ENST00000638799 CDK5RAP2Q96SN8 1893 aa8.55□□□□□ -1.04
RTTN-213ENST00000638799 ORC4O43929 436 aa8.55□□□□□ -1.04
RTTN-213ENST00000638799 CDKL5O76039 1030 aa8.55□□□□□ -1.04
RTTN-213ENST00000638799 CAMK4Q16566 473 aa8.55□□□□□ -1.04
RTTN-213ENST00000638799 SLC44A5Q8NCS7 719 aa8.55□□□□□ -1.04
RTTN-213ENST00000638799 RCOR1Q9UKL0 485 aa8.55□□□□□ -1.04
RTTN-213ENST00000638799 CFAP45Q9UL16 551 aa8.55□□□□□ -1.04
RTTN-213ENST00000638799 NID2Q14112 1375 aa8.55□□□□□ -1.04
RTTN-213ENST00000638799 FMNL1O95466 1100 aaPredicted RBP8.55□□□□□ -1.04
RTTN-213ENST00000638799 BAG3O95817 575 aa8.55□□□□□ -1.04
RTTN-213ENST00000638799 IFNAR1P17181 557 aa8.55□□□□□ -1.04
RTTN-213ENST00000638799 SSRP1Q08945 709 aaKnown RBP8.55□□□□□ -1.04
RTTN-213ENST00000638799 IFIT1BQ5T764 474 aaKnown RBP8.55□□□□□ -1.04
RTTN-213ENST00000638799 TMTC2Q8N394 836 aa8.55□□□□□ -1.04
RTTN-213ENST00000638799 MTA3Q9BTC8 594 aa8.55□□□□□ -1.04
RTTN-213ENST00000638799 ZC3H12CQ9C0D7 883 aaKnown RBP8.55□□□□□ -1.04
RTTN-213ENST00000638799 DACT1Q9NYF0 836 aa8.55□□□□□ -1.04
RTTN-213ENST00000638799 CLIC4Q9Y696 253 aa8.55□□□□□ -1.04
RTTN-213ENST00000638799 RGPD3A6NKT7 1758 aaPredicted RBP8.54□□□□□ -1.04
RTTN-213ENST00000638799 RGPD4Q7Z3J3 1758 aa8.54□□□□□ -1.04
RTTN-213ENST00000638799 GPR75-ASB3A0A0A6YYF3 556 aa8.54□□□□□ -1.04
RTTN-213ENST00000638799 hCG_1642624A0A1W2PR95 340 aa8.54□□□□□ -1.04
RTTN-213ENST00000638799 NR1I2O75469 434 aa8.54□□□□□ -1.04
RTTN-213ENST00000638799 TMED8Q6PL24 325 aaPredicted RBP8.54□□□□□ -1.04
RTTN-213ENST00000638799 CPLX2Q6PUV4 134 aaKnown RBP8.54□□□□□ -1.04
RTTN-213ENST00000638799 DEFB132Q7Z7B7 95 aa8.54□□□□□ -1.04
RTTN-213ENST00000638799 SLX4Q8IY92 1834 aa8.54□□□□□ -1.04
RTTN-213ENST00000638799 LDHCP07864 332 aa8.54□□□□□ -1.04
RTTN-213ENST00000638799 RHBDL3P58872 404 aa8.54□□□□□ -1.04
RTTN-213ENST00000638799 CRACR2BQ8N4Y2 399 aaPredicted RBP8.54□□□□□ -1.04
RTTN-213ENST00000638799 CCDC94Q9BW85 323 aaPredicted RBP8.54□□□□□ -1.04
RTTN-213ENST00000638799 COA1Q9GZY4 146 aa8.54□□□□□ -1.04
RTTN-213ENST00000638799 TSPY26PQ9H489 355 aa8.54□□□□□ -1.04
RTTN-213ENST00000638799 FAM205AQ6ZU69 1335 aa8.54□□□□□ -1.04
RTTN-213ENST00000638799 PLEKHA8P1O95397 391 aa8.54□□□□□ -1.04
RTTN-213ENST00000638799 TROAPQ12815 778 aa8.54□□□□□ -1.04
RTTN-213ENST00000638799 MYSM1Q5VVJ2 828 aa8.54□□□□□ -1.04
RTTN-213ENST00000638799 PAXIP1Q6ZW49 1069 aaPredicted RBP8.54□□□□□ -1.04
RTTN-213ENST00000638799 IQCA1Q86XH1 822 aa8.54□□□□□ -1.04
RTTN-213ENST00000638799 BICD2Q8TD16 824 aa8.54□□□□□ -1.04
RTTN-213ENST00000638799 SHISA4Q96DD7 197 aa8.54□□□□□ -1.04
RTTN-213ENST00000638799 ZNF396Q96N95 335 aaPredicted RBP8.54□□□□□ -1.04
RTTN-213ENST00000638799 NOL10Q9BSC4 688 aaKnown RBP8.54□□□□□ -1.04
RTTN-213ENST00000638799 IL17RBQ9NRM6 502 aa8.54□□□□□ -1.04
RTTN-213ENST00000638799 KCNJ14Q9UNX9 436 aa8.54□□□□□ -1.04
RTTN-213ENST00000638799 NAV1Q8NEY1 1877 aa8.54□□□□□ -1.04
RTTN-213ENST00000638799 GOLGA6L6A8MZA4 724 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 PCP11498 1178 aaKnown RBP8.53□□□□□ -1.04
RTTN-213ENST00000638799 PDE4BQ07343 736 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 RCSD1Q6JBY9 416 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 TEX11Q8IYF3 940 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 GOLPH3LQ9H4A5 285 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 DBNDD1Q9H9R9 158 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 STK32BQ9NY57 414 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 DAGLAQ9Y4D2 1042 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 DLEC1Q9Y238 1755 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 STK36Q9NRP7 1315 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 TSPY2A6NKD2 308 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 H0YIN7 160 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 C17orf53Q8N3J3 647 aaPredicted RBP8.53□□□□□ -1.04
RTTN-213ENST00000638799 TBC1D22AQ8WUA7 517 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 ZKSCAN5Q9Y2L8 839 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 BAZ2BQ9UIF8 2168 aaKnown RBP8.53□□□□□ -1.04
RTTN-213ENST00000638799 GAKO14976 1311 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 USP17L3A6NCW0 530 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 USP17L4A6NCW7 530 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 SLC3A2P08195 630 aaKnown RBP8.53□□□□□ -1.04
RTTN-213ENST00000638799 SCNN1DP51172 638 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 TFAP4Q01664 338 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 FUT2Q10981 343 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 USP17L1Q7RTZ2 530 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 FUCA2Q9BTY2 467 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 TTC12Q9H892 705 aaPredicted RBP8.53□□□□□ -1.04
RTTN-213ENST00000638799 RTEL1Q9NZ71 1219 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 USP25Q9UHP3 1055 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 ADAMTSL1Q8N6G6 1762 aa8.53□□□□□ -1.04
RTTN-213ENST00000638799 FLT1P17948 1338 aa8.52□□□□□ -1.04
RTTN-213ENST00000638799 ME1P48163 572 aa8.52□□□□□ -1.04
RTTN-213ENST00000638799 CATIPQ7Z7H3 387 aa8.52□□□□□ -1.04
RTTN-213ENST00000638799 CKAP2LQ8IYA6 745 aa8.52□□□□□ -1.04
RTTN-213ENST00000638799 LINC00301Q8NCQ3 95 aa8.52□□□□□ -1.04
RTTN-213ENST00000638799 FAM163AQ96GL9 167 aaPredicted RBP8.52□□□□□ -1.04
RTTN-213ENST00000638799 PCDHA7Q9UN72 937 aa8.52□□□□□ -1.04
RTTN-213ENST00000638799 CCDC66A2RUB6 948 aa8.52□□□□□ -1.05
RTTN-213ENST00000638799 RCAN1P53805 252 aa8.52□□□□□ -1.05
RTTN-213ENST00000638799 BRAPQ7Z569 592 aa8.52□□□□□ -1.05
RTTN-213ENST00000638799 CCAR1Q8IX12 1150 aaKnown RBP8.52□□□□□ -1.05
RTTN-213ENST00000638799 PKN1Q16512 942 aa8.52□□□□□ -1.05
RTTN-213ENST00000638799 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.52□□□□□ -1.05
RTTN-213ENST00000638799 NUP62CLQ9H1M0 184 aa8.52□□□□□ -1.05
RTTN-213ENST00000638799 MKNK2Q9HBH9 465 aa8.52□□□□□ -1.05
RTTN-213ENST00000638799 TTF2Q9UNY4 1162 aaKnown RBP8.52□□□□□ -1.05
RTTN-213ENST00000638799 PCDHAC2Q9Y5I4 1007 aa8.52□□□□□ -1.05
RTTN-213ENST00000638799 ROBO3Q96MS0 1386 aa8.52□□□□□ -1.05
RTTN-213ENST00000638799 CCDC196A0A1B0GTZ2 297 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms