RNA–Protein interactions for RNA: ENST00000638264.1

TARDBP-229, Transcript of TAR DNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene TARDBP, Length 774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-229ENST00000638264 BECN1Q14457 450 aa13.72□□□□□ -0.21
TARDBP-229ENST00000638264 CERKLQ49MI3 558 aaPredicted RBP13.72□□□□□ -0.21
TARDBP-229ENST00000638264 RRP12Q5JTH9 1297 aaKnown RBP13.72□□□□□ -0.21
TARDBP-229ENST00000638264 NEDD1Q8NHV4 660 aa13.72□□□□□ -0.21
TARDBP-229ENST00000638264 UPF3BQ9BZI7 483 aaKnown RBP13.72□□□□□ -0.21
TARDBP-229ENST00000638264 SHMT1P34896 483 aa13.71□□□□□ -0.21
TARDBP-229ENST00000638264 TFAP4Q01664 338 aa13.71□□□□□ -0.21
TARDBP-229ENST00000638264 DGKHQ86XP1 1220 aa13.71□□□□□ -0.21
TARDBP-229ENST00000638264 ANKS1AQ92625 1134 aa13.71□□□□□ -0.21
TARDBP-229ENST00000638264 ZSCAN31Q96LW9 406 aaPredicted RBP13.71□□□□□ -0.21
TARDBP-229ENST00000638264 ZNF341Q9BYN7 854 aa13.71□□□□□ -0.21
TARDBP-229ENST00000638264 DNAJC18Q9H819 358 aa13.71□□□□□ -0.21
TARDBP-229ENST00000638264 CABP5Q9NP86 173 aa13.71□□□□□ -0.21
TARDBP-229ENST00000638264 ANGEL1Q9UNK9 670 aaKnown RBP13.71□□□□□ -0.21
TARDBP-229ENST00000638264 CLEC11AQ9Y240 323 aa13.71□□□□□ -0.21
TARDBP-229ENST00000638264 TACC3Q9Y6A5 838 aa13.71□□□□□ -0.21
TARDBP-229ENST00000638264 UNCXA6NJT0 531 aa13.7□□□□□ -0.22
TARDBP-229ENST00000638264 IFIT3O14879 490 aaKnown RBP13.7□□□□□ -0.22
TARDBP-229ENST00000638264 PPP1R12BO60237 982 aaPredicted RBP13.7□□□□□ -0.22
TARDBP-229ENST00000638264 PRDM1O75626 825 aa13.7□□□□□ -0.22
TARDBP-229ENST00000638264 RCAN1P53805 252 aa13.7□□□□□ -0.22
TARDBP-229ENST00000638264 EVCP57679 992 aa13.7□□□□□ -0.22
TARDBP-229ENST00000638264 ANTXR2P58335 489 aa13.7□□□□□ -0.22
TARDBP-229ENST00000638264 SLC4A8Q2Y0W8 1093 aa13.7□□□□□ -0.22
TARDBP-229ENST00000638264 NBPF12Q5TAG4 269 aaPredicted RBP13.7□□□□□ -0.22
TARDBP-229ENST00000638264 TMEM179Q6ZVK1 233 aa13.7□□□□□ -0.22
TARDBP-229ENST00000638264 CYB5R4Q7L1T6 521 aa13.7□□□□□ -0.22
TARDBP-229ENST00000638264 SGMS1Q86VZ5 419 aa13.7□□□□□ -0.22
TARDBP-229ENST00000638264 HSCBQ8IWL3 235 aa13.7□□□□□ -0.22
TARDBP-229ENST00000638264 SLC44A5Q8NCS7 719 aa13.7□□□□□ -0.22
TARDBP-229ENST00000638264 IGDCC4Q8TDY8 1250 aa13.7□□□□□ -0.22
TARDBP-229ENST00000638264 ZSCAN10Q96SZ4 725 aaPredicted RBP13.7□□□□□ -0.22
TARDBP-229ENST00000638264 KANSL2Q9H9L4 492 aa13.7□□□□□ -0.22
TARDBP-229ENST00000638264 INCENPQ9NQS7 918 aa13.7□□□□□ -0.22
TARDBP-229ENST00000638264 SYNPO2Q9UMS6 1093 aa13.7□□□□□ -0.22
TARDBP-229ENST00000638264 LIMCH1Q9UPQ0 1083 aa13.7□□□□□ -0.22
TARDBP-229ENST00000638264 SMIM22K7EJ46 135 aa13.69□□□□□ -0.22
TARDBP-229ENST00000638264 SH2B2O14492 632 aaPredicted RBP13.69□□□□□ -0.22
TARDBP-229ENST00000638264 CTNND1O60716 968 aaKnown RBP13.69□□□□□ -0.22
TARDBP-229ENST00000638264 CAP2P40123 477 aa13.69□□□□□ -0.22
TARDBP-229ENST00000638264 NOVP48745 357 aa13.69□□□□□ -0.22
TARDBP-229ENST00000638264 EVX2Q03828 476 aa13.69□□□□□ -0.22
TARDBP-229ENST00000638264 WTAPQ15007 396 aa13.69□□□□□ -0.22
TARDBP-229ENST00000638264 ABCB5Q2M3G0 1257 aa13.69□□□□□ -0.22
TARDBP-229ENST00000638264 TMEM67Q5HYA8 995 aa13.69□□□□□ -0.22
TARDBP-229ENST00000638264 Q6ZUG5 572 aa13.69□□□□□ -0.22
TARDBP-229ENST00000638264 STK11IPQ8N1F8 1099 aa13.69□□□□□ -0.22
TARDBP-229ENST00000638264 GPBP1L1Q9HC44 474 aaPredicted RBP13.69□□□□□ -0.22
TARDBP-229ENST00000638264 NMRK2Q9NPI5 230 aa13.69□□□□□ -0.22
TARDBP-229ENST00000638264 SH2B1Q9NRF2 756 aaPredicted RBP13.69□□□□□ -0.22
TARDBP-229ENST00000638264 ZNF112Q9UJU3 913 aa13.69□□□□□ -0.22
TARDBP-229ENST00000638264 IGKV6D-41A0A0C4DH26 115 aa13.68□□□□□ -0.22
TARDBP-229ENST00000638264 ASNSP08243 561 aa13.68□□□□□ -0.22
TARDBP-229ENST00000638264 AK2P54819 239 aa13.68□□□□□ -0.22
TARDBP-229ENST00000638264 FKBP1BP68106 108 aa13.68□□□□□ -0.22
TARDBP-229ENST00000638264 PPP2R5BQ15173 497 aa13.68□□□□□ -0.22
TARDBP-229ENST00000638264 SEC23AQ15436 765 aa13.68□□□□□ -0.22
TARDBP-229ENST00000638264 SYNE3Q6ZMZ3 975 aa13.68□□□□□ -0.22
TARDBP-229ENST00000638264 USP48Q86UV5 1035 aa13.68□□□□□ -0.22
TARDBP-229ENST00000638264 ZNF274Q96GC6 653 aaPredicted RBP13.68□□□□□ -0.22
TARDBP-229ENST00000638264 TBC1D2Q9BYX2 928 aa13.68□□□□□ -0.22
TARDBP-229ENST00000638264 TNKSO95271 1327 aa13.67□□□□□ -0.22
TARDBP-229ENST00000638264 SIPA1L1O43166 1804 aa13.67□□□□□ -0.22
TARDBP-229ENST00000638264 CCDC69A6NI79 296 aa13.67□□□□□ -0.22
TARDBP-229ENST00000638264 PHF20L1A8MW92 1017 aa13.67□□□□□ -0.22
TARDBP-229ENST00000638264 ADM5C9JUS6 153 aa13.67□□□□□ -0.22
TARDBP-229ENST00000638264 TTLL1O95922 423 aa13.67□□□□□ -0.22
TARDBP-229ENST00000638264 CPA1P15085 419 aa13.67□□□□□ -0.22
TARDBP-229ENST00000638264 AKR1B1P15121 316 aa13.67□□□□□ -0.22
TARDBP-229ENST00000638264 IREB2P48200 963 aaKnown RBP13.67□□□□□ -0.22
TARDBP-229ENST00000638264 TOB2Q14106 344 aaPredicted RBP13.67□□□□□ -0.22
TARDBP-229ENST00000638264 MAP3K11Q16584 847 aa13.67□□□□□ -0.22
TARDBP-229ENST00000638264 FAM47AQ5JRC9 791 aa13.67□□□□□ -0.22
TARDBP-229ENST00000638264 IFIT1BQ5T764 474 aaKnown RBP13.67□□□□□ -0.22
TARDBP-229ENST00000638264 CHADLQ6NUI6 762 aa13.67□□□□□ -0.22
TARDBP-229ENST00000638264 MIGA2Q7L4E1 593 aa13.67□□□□□ -0.22
TARDBP-229ENST00000638264 ENAHQ8N8S7 591 aaPredicted RBP13.67□□□□□ -0.22
TARDBP-229ENST00000638264 BRF1Q92994 677 aa13.67□□□□□ -0.22
TARDBP-229ENST00000638264 CDCA5Q96FF9 252 aa13.67□□□□□ -0.22
TARDBP-229ENST00000638264 LY9Q9HBG7 655 aa13.67□□□□□ -0.22
TARDBP-229ENST00000638264 MTMR4Q9NYA4 1195 aa13.67□□□□□ -0.22
TARDBP-229ENST00000638264 NYAP2Q9P242 653 aa13.67□□□□□ -0.22
TARDBP-229ENST00000638264 K7ELQ4 463 aaPredicted RBP13.66□□□□□ -0.22
TARDBP-229ENST00000638264 MPHOSPH10O00566 681 aaKnown RBP13.66□□□□□ -0.22
TARDBP-229ENST00000638264 CALM1P0DP23 149 aa13.66□□□□□ -0.22
TARDBP-229ENST00000638264 CALM2P0DP24 149 aa13.66□□□□□ -0.22
TARDBP-229ENST00000638264 CALM3P0DP25 149 aa13.66□□□□□ -0.22
TARDBP-229ENST00000638264 TOP1P11387 765 aaKnown RBP13.66□□□□□ -0.22
TARDBP-229ENST00000638264 NOL9Q5SY16 702 aaKnown RBP13.66□□□□□ -0.22
TARDBP-229ENST00000638264 CHST3Q7LGC8 479 aa13.66□□□□□ -0.22
TARDBP-229ENST00000638264 ARMC9Q7Z3E5 817 aa13.66□□□□□ -0.22
TARDBP-229ENST00000638264 MKL1Q969V6 931 aa13.66□□□□□ -0.22
TARDBP-229ENST00000638264 KLRG1Q96E93 195 aa13.66□□□□□ -0.22
TARDBP-229ENST00000638264 MAP3K14Q99558 947 aa13.66□□□□□ -0.22
TARDBP-229ENST00000638264 GLIS2Q9BZE0 524 aaPredicted RBP13.66□□□□□ -0.22
TARDBP-229ENST00000638264 IL17RBQ9NRM6 502 aa13.66□□□□□ -0.22
TARDBP-229ENST00000638264 SLC12A7Q9Y666 1083 aa13.66□□□□□ -0.22
TARDBP-229ENST00000638264 FAM196BA6NMK8 535 aa13.65□□□□□ -0.22
TARDBP-229ENST00000638264 DHX16O60231 1041 aaKnown RBP13.65□□□□□ -0.22
TARDBP-229ENST00000638264 DDAH1O94760 285 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms