RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 WASF1Q92558 559 aa14.25□□□□□ -0.13
CACNA1D-228ENST00000638120 ZNF396Q96N95 335 aaPredicted RBP14.25□□□□□ -0.13
CACNA1D-228ENST00000638120 GRPEL1Q9HAV7 217 aa14.25□□□□□ -0.13
CACNA1D-228ENST00000638120 GJB4Q9NTQ9 266 aa14.25□□□□□ -0.13
CACNA1D-228ENST00000638120 NMT2O60551 498 aa14.24□□□□□ -0.13
CACNA1D-228ENST00000638120 CCDC183Q5T5S1 534 aa14.24□□□□□ -0.13
CACNA1D-228ENST00000638120 STRIP1Q5VSL9 837 aa14.24□□□□□ -0.13
CACNA1D-228ENST00000638120 KRT40Q6A162 431 aa14.24□□□□□ -0.13
CACNA1D-228ENST00000638120 HHIPL2Q6UWX4 724 aa14.24□□□□□ -0.13
CACNA1D-228ENST00000638120 C16orf86Q6ZW13 317 aa14.24□□□□□ -0.13
CACNA1D-228ENST00000638120 CCDC125Q86Z20 511 aa14.24□□□□□ -0.13
CACNA1D-228ENST00000638120 CRACR2BQ8N4Y2 399 aaPredicted RBP14.24□□□□□ -0.13
CACNA1D-228ENST00000638120 MKNK2Q9HBH9 465 aa14.24□□□□□ -0.13
CACNA1D-228ENST00000638120 ZNF287Q9HBT7 754 aa14.24□□□□□ -0.13
CACNA1D-228ENST00000638120 RBM28Q9NW13 759 aaKnown RBP14.24□□□□□ -0.13
CACNA1D-228ENST00000638120 SYCE3A1L190 88 aa14.23□□□□□ -0.13
CACNA1D-228ENST00000638120 TFAP4Q01664 338 aa14.23□□□□□ -0.13
CACNA1D-228ENST00000638120 GRIPAP1Q4V328 841 aa14.23□□□□□ -0.13
CACNA1D-228ENST00000638120 DACT2Q5SW24 774 aa14.23□□□□□ -0.13
CACNA1D-228ENST00000638120 RCSD1Q6JBY9 416 aa14.23□□□□□ -0.13
CACNA1D-228ENST00000638120 TTLL6Q8N841 843 aa14.23□□□□□ -0.13
CACNA1D-228ENST00000638120 SLC44A5Q8NCS7 719 aa14.23□□□□□ -0.13
CACNA1D-228ENST00000638120 TEKT1Q969V4 418 aa14.23□□□□□ -0.13
CACNA1D-228ENST00000638120 USP28Q96RU2 1077 aa14.23□□□□□ -0.13
CACNA1D-228ENST00000638120 PSME4Q14997 1843 aa14.23□□□□□ -0.13
CACNA1D-228ENST00000638120 MYH6P13533 1939 aa14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 KIF28PB7ZC32 967 aa14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 DEXIO95424 95 aa14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 RASA1P20936 1047 aa14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 TRIM29Q14134 588 aa14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 AOC3Q16853 763 aa14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 CCDC178Q5BJE1 867 aa14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 LRSAM1Q6UWE0 723 aa14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 DGKHQ86XP1 1220 aa14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 ANKS1AQ92625 1134 aa14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 RNF26Q9BY78 433 aaPredicted RBP14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 KCNQ5Q9NR82 932 aa14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 TCP11L1Q9NUJ3 509 aa14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 RCOR1Q9UKL0 485 aa14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 GOLGA6L4A6NEF3 574 aa14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 UBE2Q2LH0YL09 131 aa14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 C21orf2O43822 256 aa14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 WDHD1O75717 1129 aaPredicted RBP14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 XRCC6P12956 609 aaKnown RBP eCLIP14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 GUCY1A2P33402 732 aa14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 SCNN1DP51172 638 aa14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 FUT2Q10981 343 aa14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 CCDC93Q567U6 631 aa14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 ZNF444Q8N0Y2 327 aaPredicted RBP14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 FTOQ9C0B1 505 aaKnown RBP eCLIP14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 IL17RBQ9NRM6 502 aa14.22□□□□□ -0.13
CACNA1D-228ENST00000638120 USP17L3A6NCW0 530 aa14.21□□□□□ -0.13
CACNA1D-228ENST00000638120 USP17L4A6NCW7 530 aa14.21□□□□□ -0.13
CACNA1D-228ENST00000638120 TSPY3P0CV98 308 aa14.21□□□□□ -0.13
CACNA1D-228ENST00000638120 TSPY8P0CW00 308 aa14.21□□□□□ -0.13
CACNA1D-228ENST00000638120 KCNA3P22001 575 aa14.21□□□□□ -0.13
CACNA1D-228ENST00000638120 CRKP46108 304 aa14.21□□□□□ -0.13
CACNA1D-228ENST00000638120 CDK8P49336 464 aa14.21□□□□□ -0.13
CACNA1D-228ENST00000638120 HDLBPQ00341 1268 aaKnown RBP14.21□□□□□ -0.13
CACNA1D-228ENST00000638120 TPRNQ4KMQ1 711 aa14.21□□□□□ -0.13
CACNA1D-228ENST00000638120 MYSM1Q5VVJ2 828 aa14.21□□□□□ -0.13
CACNA1D-228ENST00000638120 APOBEC3HQ6NTF7 200 aaKnown RBP14.21□□□□□ -0.13
CACNA1D-228ENST00000638120 TMTC3Q6ZXV5 915 aa14.21□□□□□ -0.13
CACNA1D-228ENST00000638120 USP17L1Q7RTZ2 530 aa14.21□□□□□ -0.13
CACNA1D-228ENST00000638120 CMTR1Q8N1G2 835 aaKnown RBP14.21□□□□□ -0.13
CACNA1D-228ENST00000638120 PGBD1Q96JS3 809 aa14.21□□□□□ -0.13
CACNA1D-228ENST00000638120 ZDHHC15Q96MV8 337 aa14.21□□□□□ -0.13
CACNA1D-228ENST00000638120 MRIQ9BWK5 157 aa14.21□□□□□ -0.13
CACNA1D-228ENST00000638120 RTEL1Q9NZ71 1219 aa14.21□□□□□ -0.13
CACNA1D-228ENST00000638120 PPIP5K2O43314 1243 aa14.2□□□□□ -0.14
CACNA1D-228ENST00000638120 DPEP1P16444 411 aa14.2□□□□□ -0.14
CACNA1D-228ENST00000638120 CEBPZQ03701 1054 aaKnown RBP14.2□□□□□ -0.14
CACNA1D-228ENST00000638120 CDC42EP5Q6NZY7 148 aa14.2□□□□□ -0.14
CACNA1D-228ENST00000638120 RTKN2Q8IZC4 609 aa14.2□□□□□ -0.14
CACNA1D-228ENST00000638120 CCDC82Q8N4S0 544 aa14.2□□□□□ -0.14
CACNA1D-228ENST00000638120 CTCFLQ8NI51 663 aaPredicted RBP14.2□□□□□ -0.14
CACNA1D-228ENST00000638120 DDX4Q9NQI0 724 aaKnown RBP14.2□□□□□ -0.14
CACNA1D-228ENST00000638120 USP40Q9NVE5 1235 aa14.2□□□□□ -0.14
CACNA1D-228ENST00000638120 CNTNAP5Q8WYK1 1306 aa14.2□□□□□ -0.14
CACNA1D-228ENST00000638120 LETM1O95202 739 aaPredicted RBP14.2□□□□□ -0.14
CACNA1D-228ENST00000638120 PLEKHA8P1O95397 391 aa14.2□□□□□ -0.14
CACNA1D-228ENST00000638120 YEATS4O95619 227 aa14.2□□□□□ -0.14
CACNA1D-228ENST00000638120 U2AF2P26368 475 aaKnown RBP eCLIP14.2□□□□□ -0.14
CACNA1D-228ENST00000638120 PICALMQ13492 652 aa14.2□□□□□ -0.14
CACNA1D-228ENST00000638120 KIAA0825Q8IV33 1275 aa14.2□□□□□ -0.14
CACNA1D-228ENST00000638120 KLHL34Q8N239 644 aa14.2□□□□□ -0.14
CACNA1D-228ENST00000638120 PSMD1Q99460 953 aa14.2□□□□□ -0.14
CACNA1D-228ENST00000638120 MAP3K14Q99558 947 aa14.2□□□□□ -0.14
CACNA1D-228ENST00000638120 KAT14Q9H8E8 782 aa14.2□□□□□ -0.14
CACNA1D-228ENST00000638120 POLR3EQ9NVU0 708 aa14.2□□□□□ -0.14
CACNA1D-228ENST00000638120 PRPF3O43395 683 aaKnown RBP14.19□□□□□ -0.14
CACNA1D-228ENST00000638120 MMP1P03956 469 aa14.19□□□□□ -0.14
CACNA1D-228ENST00000638120 LIG1P18858 919 aa14.19□□□□□ -0.14
CACNA1D-228ENST00000638120 NASPP49321 788 aaPredicted RBP14.19□□□□□ -0.14
CACNA1D-228ENST00000638120 AKAP17AQ02040 695 aaKnown RBP14.19□□□□□ -0.14
CACNA1D-228ENST00000638120 GABPAQ06546 454 aa14.19□□□□□ -0.14
CACNA1D-228ENST00000638120 PNMA1Q8ND90 353 aa14.19□□□□□ -0.14
CACNA1D-228ENST00000638120 NEDD1Q8NHV4 660 aa14.19□□□□□ -0.14
CACNA1D-228ENST00000638120 OSBPL5Q9H0X9 879 aaPredicted RBP14.19□□□□□ -0.14
CACNA1D-228ENST00000638120 MYH8P13535 1937 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms