RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 PSMC4P43686 418 aa20.24■□□□□ 0.83
CACNA1A-259ENST00000638114 MTMR2Q13614 643 aa20.24■□□□□ 0.83
CACNA1A-259ENST00000638114 TSHZ3Q63HK5 1081 aa20.24■□□□□ 0.83
CACNA1A-259ENST00000638114 SDR42E1Q8WUS8 393 aa20.24■□□□□ 0.83
CACNA1A-259ENST00000638114 WDR18Q9BV38 432 aa20.24■□□□□ 0.83
CACNA1A-259ENST00000638114 MCM9Q9NXL9 1143 aa20.24■□□□□ 0.83
CACNA1A-259ENST00000638114 PNMA3Q9UL41 463 aa20.24■□□□□ 0.83
CACNA1A-259ENST00000638114 MBD4O95243 580 aa20.23■□□□□ 0.83
CACNA1A-259ENST00000638114 FMNL1O95466 1100 aaPredicted RBP20.23■□□□□ 0.83
CACNA1A-259ENST00000638114 GNRH1P01148 92 aa20.23■□□□□ 0.83
CACNA1A-259ENST00000638114 PLCD1P51178 756 aa20.23■□□□□ 0.83
CACNA1A-259ENST00000638114 ZSCAN25Q6NSZ9 544 aa20.23■□□□□ 0.83
CACNA1A-259ENST00000638114 TATDN1Q6P1N9 297 aa20.23■□□□□ 0.83
CACNA1A-259ENST00000638114 GH2P01242 217 aa20.22■□□□□ 0.83
CACNA1A-259ENST00000638114 CHGBP05060 677 aa20.22■□□□□ 0.83
CACNA1A-259ENST00000638114 CTGFP29279 349 aa20.22■□□□□ 0.83
CACNA1A-259ENST00000638114 PABPC4Q13310 644 aaKnown RBP eCLIP20.22■□□□□ 0.83
CACNA1A-259ENST00000638114 UBE3CQ15386 1083 aa20.22■□□□□ 0.83
CACNA1A-259ENST00000638114 SLC9C1Q4G0N8 1177 aa20.22■□□□□ 0.83
CACNA1A-259ENST00000638114 SH3D19Q5HYK7 790 aa20.22■□□□□ 0.83
CACNA1A-259ENST00000638114 TRIM47Q96LD4 638 aa20.22■□□□□ 0.83
CACNA1A-259ENST00000638114 DCP1AQ9NPI6 582 aaPredicted RBP20.22■□□□□ 0.83
CACNA1A-259ENST00000638114 TMOD4Q9NZQ9 345 aa20.22■□□□□ 0.83
CACNA1A-259ENST00000638114 PRKAB2O43741 272 aa20.21■□□□□ 0.83
CACNA1A-259ENST00000638114 PRMT2P55345 433 aa20.21■□□□□ 0.83
CACNA1A-259ENST00000638114 BACE1P56817 501 aa20.21■□□□□ 0.83
CACNA1A-259ENST00000638114 CERKLQ49MI3 558 aaPredicted RBP20.21■□□□□ 0.83
CACNA1A-259ENST00000638114 ARMC5Q96C12 935 aa20.21■□□□□ 0.83
CACNA1A-259ENST00000638114 C19orf81C9J6K1 198 aa20.2■□□□□ 0.82
CACNA1A-259ENST00000638114 USP17L10C9JJH3 530 aa20.2■□□□□ 0.82
CACNA1A-259ENST00000638114 OSBPP22059 807 aa20.2■□□□□ 0.82
CACNA1A-259ENST00000638114 HOXD10P28358 340 aa20.2■□□□□ 0.82
CACNA1A-259ENST00000638114 FCGRTP55899 365 aa20.2■□□□□ 0.82
CACNA1A-259ENST00000638114 CYP2D6P10635 497 aa20.19■□□□□ 0.82
CACNA1A-259ENST00000638114 SHMT1P34896 483 aa20.19■□□□□ 0.82
CACNA1A-259ENST00000638114 EVX2Q03828 476 aa20.19■□□□□ 0.82
CACNA1A-259ENST00000638114 RAB3GAP1Q15042 981 aa20.19■□□□□ 0.82
CACNA1A-259ENST00000638114 ABCB5Q2M3G0 1257 aa20.19■□□□□ 0.82
CACNA1A-259ENST00000638114 NBPF11Q86T75 865 aa20.19■□□□□ 0.82
CACNA1A-259ENST00000638114 ANKRD13CQ8N6S4 541 aa20.19■□□□□ 0.82
CACNA1A-259ENST00000638114 KBTBD3Q8NAB2 608 aa20.19■□□□□ 0.82
CACNA1A-259ENST00000638114 ASCC2Q9H1I8 757 aaPredicted RBP20.19■□□□□ 0.82
CACNA1A-259ENST00000638114 CABP5Q9NP86 173 aa20.19■□□□□ 0.82
CACNA1A-259ENST00000638114 ATP8A2Q9NTI2 1148 aa20.19■□□□□ 0.82
CACNA1A-259ENST00000638114 ZBTB47Q9UFB7 747 aaPredicted RBP20.19■□□□□ 0.82
CACNA1A-259ENST00000638114 SRRDQ9UH36 339 aa20.19■□□□□ 0.82
CACNA1A-259ENST00000638114 MGAMO43451 1857 aa20.19■□□□□ 0.82
CACNA1A-259ENST00000638114 IRX3P78415 501 aaPredicted RBP20.18■□□□□ 0.82
CACNA1A-259ENST00000638114 GABPAQ06546 454 aa20.18■□□□□ 0.82
CACNA1A-259ENST00000638114 DDRGK1Q96HY6 314 aa20.18■□□□□ 0.82
CACNA1A-259ENST00000638114 ZNF333Q96JL9 665 aa20.18■□□□□ 0.82
CACNA1A-259ENST00000638114 FEZ1Q99689 392 aa20.18■□□□□ 0.82
CACNA1A-259ENST00000638114 PUS7LQ9H0K6 701 aaKnown RBP20.18■□□□□ 0.82
CACNA1A-259ENST00000638114 TTC41PQ6P2S7 1318 aa20.18■□□□□ 0.82
CACNA1A-259ENST00000638114 MYPNQ86TC9 1320 aa20.18■□□□□ 0.82
CACNA1A-259ENST00000638114 BAZ2AQ9UIF9 1905 aaKnown RBP20.17■□□□□ 0.82
CACNA1A-259ENST00000638114 ERC2O15083 957 aa20.17■□□□□ 0.82
CACNA1A-259ENST00000638114 RAET1EQ8TD07 263 aa20.17■□□□□ 0.82
CACNA1A-259ENST00000638114 OTUD7AQ8TE49 926 aaPredicted RBP20.17■□□□□ 0.82
CACNA1A-259ENST00000638114 SH3TC2Q8TF17 1288 aa20.17■□□□□ 0.82
CACNA1A-259ENST00000638114 SLC4A4Q9Y6R1 1079 aa20.17■□□□□ 0.82
CACNA1A-259ENST00000638114 CENPFP49454 3210 aa20.17■□□□□ 0.82
CACNA1A-259ENST00000638114 POTEFA5A3E0 1075 aa20.16■□□□□ 0.82
CACNA1A-259ENST00000638114 MPHOSPH10O00566 681 aaKnown RBP20.16■□□□□ 0.82
CACNA1A-259ENST00000638114 GCLCP48506 637 aaPredicted RBP20.16■□□□□ 0.82
CACNA1A-259ENST00000638114 PRKCZQ05513 592 aa20.16■□□□□ 0.82
CACNA1A-259ENST00000638114 ZYXQ15942 572 aaKnown RBP20.16■□□□□ 0.82
CACNA1A-259ENST00000638114 FAM110CQ1W6H9 321 aa20.16■□□□□ 0.82
CACNA1A-259ENST00000638114 ANKRD45Q5TZF3 282 aa20.16■□□□□ 0.82
CACNA1A-259ENST00000638114 USP17L2Q6R6M4 530 aa20.16■□□□□ 0.82
CACNA1A-259ENST00000638114 AMOTL1Q8IY63 956 aa20.16■□□□□ 0.82
CACNA1A-259ENST00000638114 SLC44A5Q8NCS7 719 aa20.16■□□□□ 0.82
CACNA1A-259ENST00000638114 KIAA0100Q14667 2235 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-259ENST00000638114 TNPO2O14787 897 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-259ENST00000638114 GLRX3O76003 335 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-259ENST00000638114 MYCP01106 439 aaPredicted RBP20.15■□□□□ 0.82
CACNA1A-259ENST00000638114 HDAC1Q13547 482 aaPredicted RBP20.15■□□□□ 0.82
CACNA1A-259ENST00000638114 DYNLL2Q96FJ2 89 aa20.15■□□□□ 0.82
CACNA1A-259ENST00000638114 TMEM106CQ9BVX2 250 aa20.15■□□□□ 0.82
CACNA1A-259ENST00000638114 EMILIN3Q9NT22 766 aa20.15■□□□□ 0.82
CACNA1A-259ENST00000638114 SWAP70Q9UH65 585 aa20.15■□□□□ 0.82
CACNA1A-259ENST00000638114 CYP2D7A0A087X1C5 515 aa20.14■□□□□ 0.81
CACNA1A-259ENST00000638114 USP17L12C9JPN9 530 aa20.14■□□□□ 0.81
CACNA1A-259ENST00000638114 USP17L21D6R901 530 aa20.14■□□□□ 0.81
CACNA1A-259ENST00000638114 RNF113AO15541 343 aaKnown RBP20.14■□□□□ 0.81
CACNA1A-259ENST00000638114 ZFYP08048 801 aaPredicted RBP20.14■□□□□ 0.81
CACNA1A-259ENST00000638114 MX1P20591 662 aa20.14■□□□□ 0.81
CACNA1A-259ENST00000638114 HOXA7P31268 230 aaPredicted RBP20.14■□□□□ 0.81
CACNA1A-259ENST00000638114 SEPT2Q15019 361 aa20.14■□□□□ 0.81
CACNA1A-259ENST00000638114 PI4K2BQ8TCG2 481 aa20.14■□□□□ 0.81
CACNA1A-259ENST00000638114 APPBP2Q92624 585 aa20.14■□□□□ 0.81
CACNA1A-259ENST00000638114 GCC1Q96CN9 775 aa20.14■□□□□ 0.81
CACNA1A-259ENST00000638114 GABRQQ9UN88 632 aa20.14■□□□□ 0.81
CACNA1A-259ENST00000638114 MYH8P13535 1937 aa20.14■□□□□ 0.81
CACNA1A-259ENST00000638114 TNRC18O15417 2968 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-259ENST00000638114 RBBP6Q7Z6E9 1792 aaKnown RBP20.13■□□□□ 0.81
CACNA1A-259ENST00000638114 GRK4P32298 578 aa20.13■□□□□ 0.81
CACNA1A-259ENST00000638114 GUCY1A2P33402 732 aa20.13■□□□□ 0.81
CACNA1A-259ENST00000638114 AAMPQ13685 434 aa20.13■□□□□ 0.81
CACNA1A-259ENST00000638114 LRRFIP1Q32MZ4 808 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms