RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 MCF2L2Q86YR7 1114 aa21.32■■□□□ 1
CACNA1A-257ENST00000638009 TBC1D32Q96NH3 1257 aa21.32■■□□□ 1
CACNA1A-257ENST00000638009 ZRANB1Q9UGI0 708 aa21.32■■□□□ 1
CACNA1A-257ENST00000638009 TRMT112Q9UI30 125 aaKnown RBP21.32■■□□□ 1
CACNA1A-257ENST00000638009 IFNA8P32881 189 aa21.32■■□□□ 1
CACNA1A-257ENST00000638009 KARSQ15046 597 aaKnown RBP21.32■■□□□ 1
CACNA1A-257ENST00000638009 SERPINI1Q99574 410 aa21.32■■□□□ 1
CACNA1A-257ENST00000638009 DDX41Q9UJV9 622 aaKnown RBP21.32■■□□□ 1
CACNA1A-257ENST00000638009 CDK19Q9BWU1 502 aa21.32■■□□□ 1
CACNA1A-257ENST00000638009 CFAP61Q8NHU2 1237 aa21.32■■□□□ 1
CACNA1A-257ENST00000638009 JPH4Q96JJ6 628 aa21.32■■□□□ 1
CACNA1A-257ENST00000638009 TMTC3Q6ZXV5 915 aa21.32■■□□□ 1
CACNA1A-257ENST00000638009 BBOF1Q8ND07 529 aa21.32■■□□□ 1
CACNA1A-257ENST00000638009 TTI1O43156 1089 aa21.32■■□□□ 1
CACNA1A-257ENST00000638009 CDKL2Q92772 493 aa21.32■■□□□ 1
CACNA1A-257ENST00000638009 DACT1Q9NYF0 836 aa21.32■■□□□ 1
CACNA1A-257ENST00000638009 KLF18A0A0U1RQI7 1052 aa21.31■■□□□ 1
CACNA1A-257ENST00000638009 TRIM37O94972 964 aa21.31■■□□□ 1
CACNA1A-257ENST00000638009 APBA1Q02410 837 aa21.31■■□□□ 1
CACNA1A-257ENST00000638009 GRIN1Q05586 938 aa21.31■■□□□ 1
CACNA1A-257ENST00000638009 SND1Q7KZF4 910 aaKnown RBP eCLIP21.31■■□□□ 1
CACNA1A-257ENST00000638009 SRRM1Q8IYB3 904 aaKnown RBP21.31■■□□□ 1
CACNA1A-257ENST00000638009 GOLGA5Q8TBA6 731 aa21.31■■□□□ 1
CACNA1A-257ENST00000638009 TTC25Q96NG3 672 aa21.31■■□□□ 1
CACNA1A-257ENST00000638009 DNAJC25Q9H1X3 360 aa21.31■■□□□ 1
CACNA1A-257ENST00000638009 PPP2R5CQ13362 524 aa21.31■■□□□ 1
CACNA1A-257ENST00000638009 RAB44Q7Z6P3 723 aaPredicted RBP21.31■■□□□ 1
CACNA1A-257ENST00000638009 CACTINQ8WUQ7 758 aaKnown RBP21.31■■□□□ 1
CACNA1A-257ENST00000638009 GDAP1L1Q96MZ0 367 aa21.31■■□□□ 1
CACNA1A-257ENST00000638009 PNMA2Q9UL42 364 aa21.31■■□□□ 1
CACNA1A-257ENST00000638009 TRIM58Q8NG06 486 aa21.31■■□□□ 1
CACNA1A-257ENST00000638009 KRT4P19013 534 aa21.31■■□□□ 1
CACNA1A-257ENST00000638009 SESN3P58005 492 aa21.31■■□□□ 1
CACNA1A-257ENST00000638009 RNF207Q6ZRF8 634 aa21.31■■□□□ 1
CACNA1A-257ENST00000638009 YY1AP1Q9H869 796 aa21.31■■□□□ 1
CACNA1A-257ENST00000638009 INTS4Q96HW7 963 aaKnown RBP21.31■■□□□ 1
CACNA1A-257ENST00000638009 EEF1B2P24534 225 aaKnown RBP21.3■■□□□ 1
CACNA1A-257ENST00000638009 TTC19Q6DKK2 380 aaPredicted RBP21.3■■□□□ 1
CACNA1A-257ENST00000638009 PRAM1Q96QH2 718 aa21.3■■□□□ 1
CACNA1A-257ENST00000638009 ANGPTL2Q9UKU9 493 aa21.3■■□□□ 1
CACNA1A-257ENST00000638009 EFCAB5A4FU69 1503 aa21.3■■□□□ 1
CACNA1A-257ENST00000638009 TRAF5O00463 557 aa21.3■■□□□ 1
CACNA1A-257ENST00000638009 PLS1Q14651 629 aa21.3■■□□□ 1
CACNA1A-257ENST00000638009 RPS6KA1Q15418 735 aa21.3■■□□□ 1
CACNA1A-257ENST00000638009 CCDC159P0C7I6 412 aa21.3■■□□□ 1
CACNA1A-257ENST00000638009 HYOU1Q9Y4L1 999 aa21.3■■□□□ 1
CACNA1A-257ENST00000638009 CLTAP09496 248 aa21.3■■□□□ 1
CACNA1A-257ENST00000638009 ATP2B3Q16720 1220 aa21.3■■□□□ 1
CACNA1A-257ENST00000638009 PROCA1Q8NCQ7 364 aaPredicted RBP21.3■■□□□ 1
CACNA1A-257ENST00000638009 SLC13A4Q9UKG4 626 aa21.3■■□□□ 1
CACNA1A-257ENST00000638009 C6orf229H3BNL8 230 aa21.3■■□□□ 1
CACNA1A-257ENST00000638009 C16orf87Q6PH81 154 aa21.3■■□□□ 1
CACNA1A-257ENST00000638009 DHX58Q96C10 678 aa21.3■■□□□ 1
CACNA1A-257ENST00000638009 CTNNA1P35221 906 aaKnown RBP21.3■■□□□ 1
CACNA1A-257ENST00000638009 KPNA2P52292 529 aaKnown RBP21.3■■□□□ 1
CACNA1A-257ENST00000638009 TBC1D8BQ0IIM8 1120 aa21.3■■□□□ 1
CACNA1A-257ENST00000638009 CCDC13Q8IYE1 715 aa21.29■■□□□ 1
CACNA1A-257ENST00000638009 MCMDC2Q4G0Z9 681 aa21.29■■□□□ 1
CACNA1A-257ENST00000638009 CNPY2Q9Y2B0 182 aa21.29■■□□□ 1
CACNA1A-257ENST00000638009 CCDC169A6NNP5 214 aa21.29■■□□□ 1
CACNA1A-257ENST00000638009 EFCAB13Q8IY85 973 aa21.29■■□□□ 1
CACNA1A-257ENST00000638009 TSC1Q92574 1164 aa21.29■■□□□ 1
CACNA1A-257ENST00000638009 SMC5Q8IY18 1101 aa21.29■■□□□ 1
CACNA1A-257ENST00000638009 LRRC9Q6ZRR7 1453 aa21.29■■□□□ 1
CACNA1A-257ENST00000638009 CADPSQ9ULU8 1353 aa21.29■■□□□ 1
CACNA1A-257ENST00000638009 KRT80Q6KB66 452 aa21.29■■□□□ 1
CACNA1A-257ENST00000638009 WWC3Q9ULE0 1092 aa21.29■■□□□ 1
CACNA1A-257ENST00000638009 FGFR1OP2Q9NVK5 253 aa21.28■■□□□ 1
CACNA1A-257ENST00000638009 NCAPD3P42695 1498 aa21.28■■□□□ 1
CACNA1A-257ENST00000638009 GTPBP10A4D1E9 387 aaKnown RBP21.28■■□□□ 1
CACNA1A-257ENST00000638009 TMEM247A6NEH6 219 aa21.28■■□□□ 1
CACNA1A-257ENST00000638009 F13A1P00488 732 aa21.28■■□□□ 1
CACNA1A-257ENST00000638009 SLC52A1Q9NWF4 448 aa21.28■■□□□ 1
CACNA1A-257ENST00000638009 OCA2Q04671 838 aa21.28■■□□□ 1
CACNA1A-257ENST00000638009 ANAPC5Q9UJX4 755 aa21.28■■□□□ 1
CACNA1A-257ENST00000638009 POLR2BP30876 1174 aaKnown RBP21.28■■□□□ 1
CACNA1A-257ENST00000638009 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.28■■□□□ 1
CACNA1A-257ENST00000638009 ARHGDIAP52565 204 aa21.28■■□□□ 1
CACNA1A-257ENST00000638009 MYRIPQ8NFW9 859 aa21.28■■□□□ 1
CACNA1A-257ENST00000638009 TACO1Q9BSH4 297 aaKnown RBP21.28■■□□□ 1
CACNA1A-257ENST00000638009 ST13P4Q8IZP2 240 aaPredicted RBP21.28■■□□□ 1
CACNA1A-257ENST00000638009 SERPINB10P48595 397 aa21.27■■□□□ 1
CACNA1A-257ENST00000638009 RAD51AP2Q09MP3 1159 aa21.27■■□□□ 1
CACNA1A-257ENST00000638009 MARCKSP29966 332 aaPredicted RBP21.27■■□□□ 1
CACNA1A-257ENST00000638009 TTC22Q5TAA0 569 aa21.27■■□□□ 1
CACNA1A-257ENST00000638009 SNX21Q969T3 373 aa21.27■■□□□ 1
CACNA1A-257ENST00000638009 BACH1O14867 736 aa21.27■■□□□ 1
CACNA1A-257ENST00000638009 NECAB1Q8N987 351 aa21.27■■□□□ 1
CACNA1A-257ENST00000638009 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.27■■□□□ 1
CACNA1A-257ENST00000638009 SYNJ2O15056 1496 aa21.27■■□□□ 1
CACNA1A-257ENST00000638009 HSP90AA4PQ58FG1 418 aa21.27■■□□□ 1
CACNA1A-257ENST00000638009 PROSER2Q86WR7 435 aaPredicted RBP21.27■■□□□ 1
CACNA1A-257ENST00000638009 LRRC8CQ8TDW0 803 aa21.27■■□□□ 1
CACNA1A-257ENST00000638009 CCDC85AQ96PX6 553 aaPredicted RBP21.27■■□□□ 1
CACNA1A-257ENST00000638009 RPS6KC1Q96S38 1066 aa21.27■■□□□ 1
CACNA1A-257ENST00000638009 SLFN5Q08AF3 891 aa21.27■■□□□ 1
CACNA1A-257ENST00000638009 NSD3Q9BZ95 1437 aa21.27■■□□□ 1
CACNA1A-257ENST00000638009 ZNF804AQ7Z570 1209 aa21.27■□□□□ 0.99
CACNA1A-257ENST00000638009 NINQ8N4C6 2090 aa21.27■□□□□ 0.99
CACNA1A-257ENST00000638009 NBPF3Q9H094 633 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms