RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 SYT10Q6XYQ8 523 aa18.89■□□□□ 0.62
CACNA1A-253ENST00000637927 TMCO5AQ8N6Q1 288 aa18.89■□□□□ 0.62
CACNA1A-253ENST00000637927 SPECC1L-ADORA2AF8WAN1 911 aa18.89■□□□□ 0.61
CACNA1A-253ENST00000637927 RRP9O43818 475 aaKnown RBP18.89■□□□□ 0.61
CACNA1A-253ENST00000637927 ATP6V1E1P36543 226 aa18.89■□□□□ 0.61
CACNA1A-253ENST00000637927 VPS41P49754 854 aa18.89■□□□□ 0.61
CACNA1A-253ENST00000637927 NSMFQ6X4W1 530 aa18.89■□□□□ 0.61
CACNA1A-253ENST00000637927 GDAP1L1Q96MZ0 367 aa18.89■□□□□ 0.61
CACNA1A-253ENST00000637927 NEMFO60524 1076 aa18.89■□□□□ 0.61
CACNA1A-253ENST00000637927 BAG2O95816 211 aa18.89■□□□□ 0.61
CACNA1A-253ENST00000637927 YARSP54577 528 aaKnown RBP18.89■□□□□ 0.61
CACNA1A-253ENST00000637927 SULF1Q8IWU6 871 aa18.89■□□□□ 0.61
CACNA1A-253ENST00000637927 BCS1LQ9Y276 419 aa18.89■□□□□ 0.61
CACNA1A-253ENST00000637927 SCAF11Q99590 1463 aaKnown RBP18.89■□□□□ 0.61
CACNA1A-253ENST00000637927 ZBTB33Q86T24 672 aa18.89■□□□□ 0.61
CACNA1A-253ENST00000637927 STK10O94804 968 aaKnown RBP18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 ALDH3A1P30838 453 aa18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 GNAQP50148 359 aa18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 DCUN1D2Q6PH85 259 aa18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 EHBP1Q8NDI1 1231 aa18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 CARD10Q9BWT7 1032 aa18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 UBN1Q9NPG3 1134 aa18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 USH1CQ9Y6N9 552 aa18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 ATP11AP98196 1134 aa18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 CCNL1Q9UK58 526 aaPredicted RBP18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 TOP2BQ02880 1626 aa18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 ITGA6P23229 1130 aa18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 CNBD1Q8NA66 436 aa18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 UHMK1Q8TAS1 419 aaKnown RBP18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 FRMD3A2A2Y4 597 aa18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 SLC12A2P55011 1212 aa18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 ATP8B2P98198 1209 aa18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 GCNT3O95395 438 aa18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 CALCOCO2Q13137 446 aa18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 DDX12PQ92771 950 aa18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 POLKQ9UBT6 870 aa18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 TRPC6Q9Y210 931 aa18.88■□□□□ 0.61
CACNA1A-253ENST00000637927 TRIM56Q9BRZ2 755 aaKnown RBP18.87■□□□□ 0.61
CACNA1A-253ENST00000637927 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.87■□□□□ 0.61
CACNA1A-253ENST00000637927 TBC1D32Q96NH3 1257 aa18.87■□□□□ 0.61
CACNA1A-253ENST00000637927 B4DLN1 442 aa18.87■□□□□ 0.61
CACNA1A-253ENST00000637927 MRPL12P52815 198 aaKnown RBP18.87■□□□□ 0.61
CACNA1A-253ENST00000637927 KRT33BQ14525 404 aa18.87■□□□□ 0.61
CACNA1A-253ENST00000637927 MYCT1Q8N699 235 aa18.87■□□□□ 0.61
CACNA1A-253ENST00000637927 NCOA5Q9HCD5 579 aaKnown RBP18.87■□□□□ 0.61
CACNA1A-253ENST00000637927 CFBP00751 764 aa18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 TCIRG1Q13488 830 aa18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 KRT81Q14533 505 aa18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 NPHP3Q7Z494 1330 aa18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 EFCC1Q9HA90 598 aa18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 NKIRAS1Q9NYS0 192 aa18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 FAM102BQ5T8I3 360 aa18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 ASIC3Q9UHC3 531 aa18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 CAPN9O14815 690 aa18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 NME8Q8N427 588 aa18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 STMN4Q9H169 189 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 OPA1O60313 960 aa18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 MICAL1Q8TDZ2 1067 aa18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 VPS37BQ9H9H4 285 aa18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 ARFGAP3Q9NP61 516 aa18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 CCDC157Q569K6 752 aa18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 CTAGE3PQ8IX95 158 aa18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 PRXQ9BXM0 1461 aa18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 HABP4Q5JVS0 413 aaKnown RBP18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 RUFY3Q7L099 469 aa18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 PHLDB2Q86SQ0 1253 aa18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 LMBR1Q8WVP7 490 aa18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 KIFAP3Q92845 792 aa18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 NOC4LQ9BVI4 516 aaKnown RBP18.86■□□□□ 0.61
CACNA1A-253ENST00000637927 NCOA1Q15788 1441 aa18.85■□□□□ 0.61
CACNA1A-253ENST00000637927 FYB2Q5VWT5 728 aa18.85■□□□□ 0.61
CACNA1A-253ENST00000637927 JADE1Q6IE81 842 aa18.85■□□□□ 0.61
CACNA1A-253ENST00000637927 TYRO3Q06418 890 aa18.85■□□□□ 0.61
CACNA1A-253ENST00000637927 C14orf93Q9H972 538 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-253ENST00000637927 MTRF1LQ9UGC7 380 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-253ENST00000637927 CFAP65Q6ZU64 1925 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-253ENST00000637927 PDE6AP16499 860 aa18.85■□□□□ 0.61
CACNA1A-253ENST00000637927 PRIM1P49642 420 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-253ENST00000637927 STAMQ92783 540 aa18.85■□□□□ 0.61
CACNA1A-253ENST00000637927 MCUR1Q96AQ8 359 aa18.85■□□□□ 0.61
CACNA1A-253ENST00000637927 TESPA1A2RU30 521 aaPredicted RBP18.85■□□□□ 0.61
CACNA1A-253ENST00000637927 ARHGAP42A6NI28 874 aa18.85■□□□□ 0.61
CACNA1A-253ENST00000637927 TNNI1P19237 187 aa18.85■□□□□ 0.61
CACNA1A-253ENST00000637927 SV2BQ7L1I2 683 aa18.85■□□□□ 0.61
CACNA1A-253ENST00000637927 FRMPD2Q68DX3 1309 aaPredicted RBP18.85■□□□□ 0.61
CACNA1A-253ENST00000637927 ZBBXA8MT70 800 aa18.85■□□□□ 0.61
CACNA1A-253ENST00000637927 CETN3O15182 167 aa18.84■□□□□ 0.61
CACNA1A-253ENST00000637927 RBM46Q8TBY0 533 aaKnown RBP18.84■□□□□ 0.61
CACNA1A-253ENST00000637927 AZI2Q9H6S1 392 aa18.84■□□□□ 0.61
CACNA1A-253ENST00000637927 IVLP07476 585 aa18.84■□□□□ 0.61
CACNA1A-253ENST00000637927 PDE4DQ08499 809 aa18.84■□□□□ 0.61
CACNA1A-253ENST00000637927 LARGE2Q8N3Y3 721 aa18.84■□□□□ 0.61
CACNA1A-253ENST00000637927 HDAC11Q96DB2 347 aa18.84■□□□□ 0.61
CACNA1A-253ENST00000637927 TTC14Q96N46 770 aa18.84■□□□□ 0.61
CACNA1A-253ENST00000637927 DENND4BO75064 1496 aaPredicted RBP18.84■□□□□ 0.61
CACNA1A-253ENST00000637927 HELLSQ9NRZ9 838 aa18.84■□□□□ 0.61
CACNA1A-253ENST00000637927 STK24Q9Y6E0 443 aa18.84■□□□□ 0.61
CACNA1A-253ENST00000637927 PRPHP41219 470 aa18.84■□□□□ 0.61
CACNA1A-253ENST00000637927 ADCY1Q08828 1119 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms